GBrowse Details

Vigan.01G295300.01

Basic Information:
Name: Vigan.01G295300.01
Multiple alignment
Variant Information
Position: Chr01:42083758..42088572 (+ strand)
Length: 4815
Functional Information:
Description: Similar to Inositol-tetrakisphosphate 1-kinase. [V7CGC1, Phaseolus vulgaris]
GO: Biological Process: inositol trisphosphate metabolic process (GO:0032957)
Cellular Component: intracellular (GO:0005622)
Molecular Function: magnesium ion binding (GO:0000287)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: inositol tetrakisphosphate 1-kinase activity (GO:0047325)
Molecular Function: inositol-1,3,4-trisphosphate 6-kinase activity (GO:0052725)
Molecular Function: inositol-1,3,4-trisphosphate 5-kinase activity (GO:0052726)
InterPro: Inositol-tetrakisphosphate 1-kinase (IPR008656)
Inositol-tetrakisphosphate 1-kinase, plant (IPR017427)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:16.58,9.40,2.32,3.19,9.42,13.93,4.41,3.14
Arabidopsis thaliana homolog: AT5G16760.1
Automatic updates:
Name: NM_001250900 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max inositol phosphate kinase (ITPK1), mRNA.
PubMed ID: 18474240 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:42083758..42084178 (+ strand)
Length: 421
Type: five_prime_UTR
Position: Chr01:42084179..42085198 (+ strand)
Length: 1020
Type: CDS
Position: Chr01:42087539..42087592 (+ strand)
Length: 54
Type: CDS
Position: Chr01:42087593..42087625 (+ strand)
Length: 33
Type: three_prime_UTR
Position: Chr01:42088556..42088572 (+ strand)
Length: 17
Type: three_prime_UTR

>Vigan.01G295300.01 class=Sequence position=Chr01:42083758..42088572 (+ strand)
ATTCTCAGTA TCACCACATT TGCACACGCG CTGCAATAAA GCGGCGCCAT CCCGCAACCC AATCCCCAGA ATATGCCACG
TCACACCTTC TCCCTCATAC CCCAGTCACC CTATCATTCC CCCTTCATCC TCACCAACCC TAGTCTAAGC TATATATATC
CCCATCCGGT TACCATCCTT TCTCTCTCTC CGTTTCTCTT TTCTCTTTTC TCTCCTTCTC TCTCTCTCCG TTTCTCTTTT
CTCTTTTCTC TCCTTCTCTC TCTCTCCGTT TCTCTTTTCT CTTTTCTCTC CTTCTCTCAT CCGTTCCGTT CGTTTTTTCC
CTCTGCAAAA TTCTCTTCCC GACCAACAAA ACCCAGGCCC TCCAAATTAG GGTTTCTCCC CGGGAATGTG ATTCAGCGCG
CGGCACGCAG AGCGAACATC AATGGCGGAG AAGACATTCG GCGGCGTGAT AGGGTATGCG CTGGCACCGA AGAAGCAGAA
CAGCTTTATC CGCGACTCAT TGGTGAGTCT AGCGAAATCG CGAGGGATCG AACTCGTTCG TGTGGACTCG GACAAGCCCC
TCGCGGATCA GGGCCCCTTC GATTGCGTCC TCCACAAGCT CTACGGCGAC GATTGGAAAC GCCAACTTCG AGAATTCCAG
TCTCGCTTCC CAAATGCGGT TATCCTCGAC GCGCCCGAAG CGATCGAGCG CCTCCACAAC CGAATCTCGA TGCTGCAGGT
CGTGTCGGAG CTCCGAATCC AGGACCGAAC CGAGACCTTT GGGATCCCAA AACAGATTGT GATATACGAC AAGGCCACGC
TAATGGACCC CCAGGCCGGG GATAGCCTCA AGTTTCCGGT GATTGCGAAG CCGCTTGTGG CCGACGGCAG TGCCAAGTCG
CACAAGATGG CGCTTGTGTT CACGCGCGAC GCGCTCGATA AGCTGAAGCC CCCGATCGTG CTGCAGGAGT TTGTCAACCA
CGGCGGCGTG ATCTTCAAGG TTTACGTGGT GGGCGAGCAC GTGCGGTGCG TGAAGCGCAA GTCCCTACCC GATGTGTCGG
AGGAGAAGAC GGTGGGCGTT TCGGAGAACC TTCTGTCGTT TTCGCAGGTC TCCAACCTGG CTAACCACGA CGTTGAAAAC
GACAGCGATG GCTATTACCG GCTGATGCAT TTGGAGGACA CCGAGATGCC CCCAAATGCC TTTGTCGTCG ACATCGCTAG
GGGCCTCAGG CGGGCCCTTA AGTTGAACCT CTTCAATTTC GACGTCATAA GGGACGCTCG ATATGGCAAT CGATATCTCA
TCATTGATAT CAATTATTTC CCTGGCTACG CCAAAATGCC TGGATACGAG GCCGTTTTGA CCCAGTTTTT CTGCGACGTC
ATGTTGAAGA AAGAGCAAGA AGAACAACAG GGGGAGGATC ACGATCCCGT TTCTACCAAG GACAATGAGG AATCTTTTCA
GGTCTGAGAT AATTTTGTCA CAGCTCAAAT GTGTTTCTCC TTCTGTACGT ATCGTTGGTT GGTGGCTTTT GGGTAACCAT
ACTTTCCCCA GTGGACCCAT TGGCCTCATT GGTTGGTACT TGGTAATGTT AGGCACGAGT CACACATTTC CATTTAGGGT
GCAGTTGGTA CAGTAGGGTT CGTTGTGGTT AGTTTTTAAC CTCTTAACTT GTATATTCCT TCCACCATTG CTTTGTGGAG
ATAGGTACCT TTTCAAATAC CCTCAACATT TAGGAAAGTT GTATTTTGCG GCTTAAGATA CTAAGCTAGA AACTGTTTTA
CCTTGTGCCC TTTTTTCCAC TCAATAACTT TTTTCCCCTA TTTTGCCAAA TTCTATTCTC ATTTTGCATA TCTTGCCTTG
GTTACATATT CTGTCGACGA TTTTCTTGTG CAGTTATCTG TTCCTTCGAT ATTTTCAGTT TCAAGGTCCT TAATTATGCT
AATGAATATT CCTTAAAGAT GATTAGCAGA ATAAGGTGGA AGATGATAAA CCGTTATGCC GCTTTTTGAT CTATCTTTAA
CTATCTGAAG TATTTGAAGT ATTGATTGAG TAAAAGGCTT AAACAATGAT TGTATTGTTT AAAACACTTG AACAAGTGGC
TAACTATGAG GCAACCCATA AATCAACTAT GCCAATAGAG GTTTAACATT GATAGATGAT TTCAAATATA ACTATTCAAA
TCTTTTGTTG ATTTCTTGGC AAATTTAGTT TTTTCTTGTG TTGAAGTTGC TCGTGCTTAA GTGTTTAGAA AAGTACGTGG
ACACATCTGT CTCATTTGTC TACGATTTTC CACCATTTCA ATCATGACTG CACTTTAAAA CCTTGCCCAT GCCCGTATTC
TTGGATTGAT TTATTTTGCT GTTATAGGTC TGTGTATACT TTGAACATCT AATGAAAAAA TTAATACATA AAAAAGGTAT
CAAACAAAAC ATCCTGTTTC GTTATATTGA CTATTTTTTT GGGATTTTAA TTGCTACTAG TGATTGCCAA CATGTTTTGT
TTTCACGTCT CCTTAACTGT TATGCATAAA GTTGGAACTC TTCATTATTT GACAAGAAAT TGGAGTAATG TGCTTATGGA
AAGCATGTCC CCCTCTTATA TCAGATTGGG TGAGTTGTAG TGGTAAGCTC CAAAAACACT ATAGCTGACA GTGGATAGTT
GGATAATTTT GTTCAAAGTT TATGTGTATA TATTGTAAAA AATGATAAAA CTTACTCAAA ATTGATATCC TTCATAATTA
ACAATAAGAA AATTAAAAGT CACAGGTCTC TTAAAACAAC ACAGAAGCAA ATTCGTACCA TAGTCATACA CGTTTTCTAG
ATAGTAATTA TCAATTATTT TCTTCTAAAT AGTCATCTTT TTTGTTTTTC ACTACTGTTA CATCTTTAAA TTTCAGTTTT
GAAAATTAAA ATTCAAAAAA ATCCCTAATG TCTCTGTTCA GAGGGATTTT TTGGAATCTA CACGTAGTAT TGCTATAGAT
GCTATGCAGC CTGCAATTTG GTCTGCTACA CTAAACAACT CTTCCACAGC CGACCCTGTA GTAGGCAGGT ATGTCTCTGT
TCAGAGGGAT TTTTTGGAAT CTACAGTGTT GCTATAGACG CTATCCAGCC TGCAATTTGG TATGCTTCGG CTTCTAAACT
AGCAATTTGG TATGCTTCGG CTTCTAAACT AAACAGCTCT TCCGCAGCGG TCCCTGTAGT AGGAAGGGGT TTTCCCAGTG
CTGCACTAAT ATAACAGCTA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA
TTCCAGGCTT CTACTGAAAT TTGACTTGCT GGTGTAACAT CTCTGTCATC ACTATAATCA AGAGATAGTG ATTTTTTATT
TATTTAATTT GTATTCAGTT TGTGGCACAA TTTGGTAGGT TTTATATGTT CACGAATTTT ACTATATGCA TGACTATCTC
AAGAAAAACA TGCATGTGTT ACAGTACAAC AGTTTCATTC AAAGATATTC CCAGTATGCA AAATGTTCAG CTTGTGTGCA
TTTTCATGCT AGTAGTTGAT GTGCTTCTGG AAGGCTGGAA GTCTTATTTT TGGCCCTTAT CTGCATGTTT ACAGAATTGC
CATTTAGAGG CGAATTAGTA TCGGATGACA TGGGTTTCAC TAATGTGCAT AAAATATGGT TTTCAAATTT AACATGACTT
CTACATTAAA ACTGTCTGTT TTCAGTTTTT GATGAGCTGT GATTTCATTC ATAATCCAAA GCTAGATATT ATATTGCTCT
TGTTTGACCT TGTTTGACCA GGTTGAATCC TGTCCAAGTT TTTATGCCAA ACAAGGAGTT TGTTCTCATC ATTAGTCTTA
GGAAGAGAGC CAGTGATGCT ATTTTCAAGT TGGTATTATT TAGTAGAACG TCTTAAAAAC ATAATATTGA TGTTATGCTT
CATGGTTATT TTTTCCTTAA TATAAGGTCT AATCATTAAA CTTTCCTCAT CTTTACTGAA TTTAGTCCGT AAAAATTTTG
CTGAAAGTTT TTTTACTTCA ATGTTGTATA CCCCATGACA AGTAATCTAT TACGATGACC TCGCTCTTGA AGTTATGACT
TGGCCCTTGA AGTTAAGTAT CTATACTTAT ATGACATGCA GTAATGGATG GTACAGTGGT CCTAGTTTCA ATGGGGCCTT
GGATTTGAAA CCTACTTGAC AAGTTCACAT GTATTGTACT TGTGAATGTT AAGCCCACAG ATACGCCAGA TTGAATGGAA
TAGAAAAAAG AAGTGGCTTT TCCACGTAGA GATTTTGTCT CATGCTTGTA GATAACTTTT GTTCAGTTGG ATATATTAAG
TGTTTTAACG TGCTATAAAT GTATTCTTGT TTTGCCAATT TGGCCATTCT GTCTGACATG TCTCCCCGGA TGTTTGTGGT
GTTATTGTAT GATTGGTGAG TGGAGTTGTA CAAGAATAGC ATTTCATTCA TTATATAGGT ACCTGGGGGC ATTGTTAAAA
TCTAGACTCG TTAACAGACC TGAAATATGC TTGGAAGTTA ACCTTGGTTT GTATATTATG ATATCTTTTC CAGGTTGATA
GCATATAAGA TAGAGAGATA CAAATTCAAT TCATGAACAT CATTTTTAAT TCAAAACTTT AAAACAGTAG ATTTATGAAT
CTTATAACTT TTTTTATTTT TACTCCAACT TACTACAATT TCCAAGAATA TATTTTTCTT TCAATGTTTG ATGTTTTTCT
TTAGCCTCGA ATCATCATCA GCAAAGCATC TCTTGACTTT CTGAAACCTC ATGAACTTAA CACCAAATTG ACATACAGGG
AAGGGAAGGC AGCGG

>Vigan.01G295300.01
ATTCTCAGTA TCACCACATT TGCACACGCG CTGCAATAAA GCGGCGCCAT CCCGCAACCC AATCCCCAGA ATATGCCACG
TCACACCTTC TCCCTCATAC CCCAGTCACC CTATCATTCC CCCTTCATCC TCACCAACCC TAGTCTAAGC TATATATATC
CCCATCCGGT TACCATCCTT TCTCTCTCTC CGTTTCTCTT TTCTCTTTTC TCTCCTTCTC TCTCTCTCCG TTTCTCTTTT
CTCTTTTCTC TCCTTCTCTC TCTCTCCGTT TCTCTTTTCT CTTTTCTCTC CTTCTCTCAT CCGTTCCGTT CGTTTTTTCC
CTCTGCAAAA TTCTCTTCCC GACCAACAAA ACCCAGGCCC TCCAAATTAG GGTTTCTCCC CGGGAATGTG ATTCAGCGCG
CGGCACGCAG AGCGAACATC AATGGCGGAG AAGACATTCG GCGGCGTGAT AGGGTATGCG CTGGCACCGA AGAAGCAGAA
CAGCTTTATC CGCGACTCAT TGGTGAGTCT AGCGAAATCG CGAGGGATCG AACTCGTTCG TGTGGACTCG GACAAGCCCC
TCGCGGATCA GGGCCCCTTC GATTGCGTCC TCCACAAGCT CTACGGCGAC GATTGGAAAC GCCAACTTCG AGAATTCCAG
TCTCGCTTCC CAAATGCGGT TATCCTCGAC GCGCCCGAAG CGATCGAGCG CCTCCACAAC CGAATCTCGA TGCTGCAGGT
CGTGTCGGAG CTCCGAATCC AGGACCGAAC CGAGACCTTT GGGATCCCAA AACAGATTGT GATATACGAC AAGGCCACGC
TAATGGACCC CCAGGCCGGG GATAGCCTCA AGTTTCCGGT GATTGCGAAG CCGCTTGTGG CCGACGGCAG TGCCAAGTCG
CACAAGATGG CGCTTGTGTT CACGCGCGAC GCGCTCGATA AGCTGAAGCC CCCGATCGTG CTGCAGGAGT TTGTCAACCA
CGGCGGCGTG ATCTTCAAGG TTTACGTGGT GGGCGAGCAC GTGCGGTGCG TGAAGCGCAA GTCCCTACCC GATGTGTCGG
AGGAGAAGAC GGTGGGCGTT TCGGAGAACC TTCTGTCGTT TTCGCAGGTC TCCAACCTGG CTAACCACGA CGTTGAAAAC
GACAGCGATG GCTATTACCG GCTGATGCAT TTGGAGGACA CCGAGATGCC CCCAAATGCC TTTGTCGTCG ACATCGCTAG
GGGCCTCAGG CGGGCCCTTA AGTTGAACCT CTTCAATTTC GACGTCATAA GGGACGCTCG ATATGGCAAT CGATATCTCA
TCATTGATAT CAATTATTTC CCTGGCTACG CCAAAATGCC TGGATACGAG GCCGTTTTGA CCCAGTTTTT CTGCGACGTC
ATGTTGAAGA AAGAGCAAGA AGAACAACAG GGGGAGGATC ACGATCCCGT TTCTACCAAG GACAATGAGG AATCTTTTCA
GGTTGAATCC TGTCCAAGTT TTTATGCCAA ACAAGGAGTT TGTTCTCATC ATTAGTCTTA GGAAGAGAGC CAGTGATGCT
ATTTTCAAGG AAGGGAAGGC AGCGG

>Vigan.01G295300.01
ATGGCGGAGA AGACATTCGG CGGCGTGATA GGGTATGCGC TGGCACCGAA GAAGCAGAAC AGCTTTATCC GCGACTCATT
GGTGAGTCTA GCGAAATCGC GAGGGATCGA ACTCGTTCGT GTGGACTCGG ACAAGCCCCT CGCGGATCAG GGCCCCTTCG
ATTGCGTCCT CCACAAGCTC TACGGCGACG ATTGGAAACG CCAACTTCGA GAATTCCAGT CTCGCTTCCC AAATGCGGTT
ATCCTCGACG CGCCCGAAGC GATCGAGCGC CTCCACAACC GAATCTCGAT GCTGCAGGTC GTGTCGGAGC TCCGAATCCA
GGACCGAACC GAGACCTTTG GGATCCCAAA ACAGATTGTG ATATACGACA AGGCCACGCT AATGGACCCC CAGGCCGGGG
ATAGCCTCAA GTTTCCGGTG ATTGCGAAGC CGCTTGTGGC CGACGGCAGT GCCAAGTCGC ACAAGATGGC GCTTGTGTTC
ACGCGCGACG CGCTCGATAA GCTGAAGCCC CCGATCGTGC TGCAGGAGTT TGTCAACCAC GGCGGCGTGA TCTTCAAGGT
TTACGTGGTG GGCGAGCACG TGCGGTGCGT GAAGCGCAAG TCCCTACCCG ATGTGTCGGA GGAGAAGACG GTGGGCGTTT
CGGAGAACCT TCTGTCGTTT TCGCAGGTCT CCAACCTGGC TAACCACGAC GTTGAAAACG ACAGCGATGG CTATTACCGG
CTGATGCATT TGGAGGACAC CGAGATGCCC CCAAATGCCT TTGTCGTCGA CATCGCTAGG GGCCTCAGGC GGGCCCTTAA
GTTGAACCTC TTCAATTTCG ACGTCATAAG GGACGCTCGA TATGGCAATC GATATCTCAT CATTGATATC AATTATTTCC
CTGGCTACGC CAAAATGCCT GGATACGAGG CCGTTTTGAC CCAGTTTTTC TGCGACGTCA TGTTGAAGAA AGAGCAAGAA
GAACAACAGG GGGAGGATCA CGATCCCGTT TCTACCAAGG ACAATGAGGA ATCTTTTCAG GTTGAATCCT GTCCAAGTTT
TTATGCCAAA CAAGGAGTTT GTTCTCATCA TTAG

>Vigan.01G295300.01
MAEKTFGGVI GYALAPKKQN SFIRDSLVSL AKSRGIELVR VDSDKPLADQ GPFDCVLHKL YGDDWKRQLR EFQSRFPNAV
ILDAPEAIER LHNRISMLQV VSELRIQDRT ETFGIPKQIV IYDKATLMDP QAGDSLKFPV IAKPLVADGS AKSHKMALVF
TRDALDKLKP PIVLQEFVNH GGVIFKVYVV GEHVRCVKRK SLPDVSEEKT VGVSENLLSF SQVSNLANHD VENDSDGYYR
LMHLEDTEMP PNAFVVDIAR GLRRALKLNL FNFDVIRDAR YGNRYLIIDI NYFPGYAKMP GYEAVLTQFF CDVMLKKEQE
EQQGEDHDPV STKDNEESFQ VESCPSFYAK QGVCSHH*