GBrowse Details

Vigan.01G123600.01

Basic Information:
Name: Vigan.01G123600.01
Multiple alignment
Variant Information
Position: Chr01:12150319..12152051 (- strand)
Length: 1733
Functional Information:
Description: Similar to uncharacterized LOC101210942. [XP_004163441.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.24,2.50,3.70,5.74,5.92,3.65,8.67,4.91
Arabidopsis thaliana homolog: AT1G28250.1
Automatic updates:
Name: NM_001251424 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527078 (LOC100527078), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:12150319..12150821 (- strand)
Length: 503
Type: three_prime_UTR
Position: Chr01:12150822..12150918 (- strand)
Length: 97
Type: CDS
Position: Chr01:12151504..12151661 (- strand)
Length: 158
Type: CDS
Position: Chr01:12151763..12151849 (- strand)
Length: 87
Type: CDS
Position: Chr01:12151850..12152051 (- strand)
Length: 202
Type: five_prime_UTR

>Vigan.01G123600.01 class=Sequence position=Chr01:12150319..12152051 (- strand)
CAAAACTCAA AATGCGAAGT GAGAAACCCA AACATTTGGG TCATTGTTGA AAGCCCAATC AATTTTACGA GTCAAAATAT
TTTTCCTTTT CTTTTTAAAT CTAAAAGGCT AAAACTGGTA GAATGAGAGA TTATCGGGAA ATTGGGATTT GATTCAACGG
CAAAAAAAAC CCTAACCAAC TTATTACAAT TTGCGTTTGA AGATGGAACA TCAGCACGCA GAAGCAGATA CTGGAGATGT
ATCATCAGCC AAAGCAGTTC TTCTAGGAGC ACTAGCTCCT GGTGTTAACG TTCGTATTTT CACTCCGCGA TCACTTCTAT
TTTTAATTTT ATACTCTTTT TTCACTAGAT TTGTGTGATT TTTGTTGTTG CTGCTGCTTT TTTAATTCAG GGTCCTACAT
GGATTACTTT AAAGTCGACT TTTTTAATGT TGGGTGTCTG TCTTGCTGTT ATGCTGGCGT TGGCATTCTC TTCCAGTGAT
TCATGGTTGA TGTTCCATGT TGCATTCTTA GTTCTAATTT GCGTCACCCT ATTCTTCCTT CTCAGCTGGT ACTTTCATTC
TTCCCTGTTT GTAAATTGTA TTGCTTCCAA ATTTAAAGTG AGATTTTATC CATCGTCATG ATTCCTACAT TGTTTGCATC
CCTGTTAACT CTAAATTAAA CATTTATCAA CTAGGCCCTA ATGTGATTTC CGAAATGGCA TAACTTGGAA GTGTTGTTAT
TGTTAGGTAA GGCCAAGTTT TGTGCTTGAT ATATGAGTTA AGCTTTTCAC TTCTGTATGT GCGTGTTTTC TTTTATATAA
GTGTGTCTGG CGCTGGCACT CCATATGGCT GTGCAAAATG TTGTGATGGA TCGATGATGT TATAATTCAT GGATCAAATT
TAGTGTTTTC AGAGTGATAT AGCATCGAAA GGAACGAATG TGTGTGTATG ATTAGTTAGT GTATTGTGAT TCTATAGGTG
GCTCGGGGAA GATTGCAAAA GTGAAAATAA AAGGGAAGTG CATGTTGTAT CATATGTTTA AGTAAAGTCG TGAAAAGCAT
CGGTTTTCTT TTGACATCTT ATTACTGGTC AGTTGTTTAC AACTTTCTCT GATGAATTTT TTATATGCCG TACTTGATAC
ATTTTCTCTG CAGGTTTCTT GCAGAAACTG GTTTAGTTTC TGTCGAACAT CAAATGCGTG AGATGGGATT AGAGCATAAG
GACCATTCAG AGAACCTAAA GAGCAAATGA CTATTTCTTA AAATATTGCT CGAGACTGGG AGCATTTCCG AGGACATTTT
CTTGAATTTT GTAGGGAAAC TTCGGTTGAA ATCTTTCATG GTGAACTGAT CGGCAACCAA AAATGTTCCA GATTTCTTAA
GAGAAACGTA TTAGCTGAAA GGTTTATCTT CTGTCAGCTA CTCTTGTTTC CCTTCCCTCT CCCTGTGTTT CTTCTTAATG
ATACGATGAA ACAGATGCAT CAGCTGGGGA ATTTTCACTA GAAGTGAGTT TCTTTCGTTC GATATGCTGT TGTGGTCTAA
TGAGGACACC GTTTATGTTG TTGTCTGATA GCTAAATTTT GTTCCATTCT TCTTTTTTTT CTTTTTTTTT TCCATTGTGG
ATTTTGCTGC AGGATACCCT GTAGTCTTGT ACGTTGCAAG TTGTATAGAT TCCCTTTTTT TGTGATGATT TTATTATTTC
TTGGCAAATT AGACTTCTGT CGTAGATTTT TTATGCAAAC CCTGAGATAT ATT

>Vigan.01G123600.01
CAAAACTCAA AATGCGAAGT GAGAAACCCA AACATTTGGG TCATTGTTGA AAGCCCAATC AATTTTACGA GTCAAAATAT
TTTTCCTTTT CTTTTTAAAT CTAAAAGGCT AAAACTGGTA GAATGAGAGA TTATCGGGAA ATTGGGATTT GATTCAACGG
CAAAAAAAAC CCTAACCAAC TTATTACAAT TTGCGTTTGA AGATGGAACA TCAGCACGCA GAAGCAGATA CTGGAGATGT
ATCATCAGCC AAAGCAGTTC TTCTAGGAGC ACTAGCTCCT GGTGTTAACG GTCCTACATG GATTACTTTA AAGTCGACTT
TTTTAATGTT GGGTGTCTGT CTTGCTGTTA TGCTGGCGTT GGCATTCTCT TCCAGTGATT CATGGTTGAT GTTCCATGTT
GCATTCTTAG TTCTAATTTG CGTCACCCTA TTCTTCCTTC TCAGCTGGTT TCTTGCAGAA ACTGGTTTAG TTTCTGTCGA
ACATCAAATG CGTGAGATGG GATTAGAGCA TAAGGACCAT TCAGAGAACC TAAAGAGCAA ATGACTATTT CTTAAAATAT
TGCTCGAGAC TGGGAGCATT TCCGAGGACA TTTTCTTGAA TTTTGTAGGG AAACTTCGGT TGAAATCTTT CATGGTGAAC
TGATCGGCAA CCAAAAATGT TCCAGATTTC TTAAGAGAAA CGTATTAGCT GAAAGGTTTA TCTTCTGTCA GCTACTCTTG
TTTCCCTTCC CTCTCCCTGT GTTTCTTCTT AATGATACGA TGAAACAGAT GCATCAGCTG GGGAATTTTC ACTAGAAGTG
AGTTTCTTTC GTTCGATATG CTGTTGTGGT CTAATGAGGA CACCGTTTAT GTTGTTGTCT GATAGCTAAA TTTTGTTCCA
TTCTTCTTTT TTTTCTTTTT TTTTTCCATT GTGGATTTTG CTGCAGGATA CCCTGTAGTC TTGTACGTTG CAAGTTGTAT
AGATTCCCTT TTTTTGTGAT GATTTTATTA TTTCTTGGCA AATTAGACTT CTGTCGTAGA TTTTTTATGC AAACCCTGAG
ATATATT

>Vigan.01G123600.01
ATGGAACATC AGCACGCAGA AGCAGATACT GGAGATGTAT CATCAGCCAA AGCAGTTCTT CTAGGAGCAC TAGCTCCTGG
TGTTAACGGT CCTACATGGA TTACTTTAAA GTCGACTTTT TTAATGTTGG GTGTCTGTCT TGCTGTTATG CTGGCGTTGG
CATTCTCTTC CAGTGATTCA TGGTTGATGT TCCATGTTGC ATTCTTAGTT CTAATTTGCG TCACCCTATT CTTCCTTCTC
AGCTGGTTTC TTGCAGAAAC TGGTTTAGTT TCTGTCGAAC ATCAAATGCG TGAGATGGGA TTAGAGCATA AGGACCATTC
AGAGAACCTA AAGAGCAAAT GA

>Vigan.01G123600.01
MEHQHAEADT GDVSSAKAVL LGALAPGVNG PTWITLKSTF LMLGVCLAVM LALAFSSSDS WLMFHVAFLV LICVTLFFLL
SWFLAETGLV SVEHQMREMG LEHKDHSENL KSK*