GBrowse Details

Vigan.01G069200.01

Basic Information:
Name: Vigan.01G069200.01
Multiple alignment
Variant Information
Position: Chr01:5546082..5550998 (+ strand)
Length: 4917
Functional Information:
Description: Similar to Aldehyde dehydrogenase. [I1KNX5, Glycine max]
GO: Biological Process: cellular aldehyde metabolic process (GO:0006081)
Biological Process: metabolic process (GO:0008152)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: aldehyde dehydrogenase [NAD(P)+] activity (GO:0004030)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (GO:0016620)
InterPro: Aldehyde dehydrogenase NAD(P)-dependent (IPR012394)
Aldehyde dehydrogenase domain (IPR015590)
Aldehyde dehydrogenase, conserved site (IPR016160)
Aldehyde/histidinol dehydrogenase (IPR016161)
Aldehyde dehydrogenase, N-terminal (IPR016162)
Aldehyde dehydrogenase, C-terminal (IPR016163)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.20,2.66,27.31,34.92,1.68,8.25,0.82,13.37
Arabidopsis thaliana homolog: AT1G44170.1, AT4G34240.1
Automatic updates:
Name: NM_001367164 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max aldehyde dehydrogenase family 3 member I1 (ALDH3I1), mRNA.
PubMed ID: 28687067 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:5546082..5546424 (+ strand)
Length: 343
Type: five_prime_UTR
Position: Chr01:5546425..5546537 (+ strand)
Length: 113
Type: CDS
Position: Chr01:5546759..5546860 (+ strand)
Length: 102
Type: CDS
Position: Chr01:5546983..5547226 (+ strand)
Length: 244
Type: CDS
Position: Chr01:5547396..5547464 (+ strand)
Length: 69
Type: CDS
Position: Chr01:5547538..5547634 (+ strand)
Length: 97
Type: CDS
Position: Chr01:5548076..5548282 (+ strand)
Length: 207
Type: CDS
Position: Chr01:5548521..5548636 (+ strand)
Length: 116
Type: CDS
Position: Chr01:5548713..5548817 (+ strand)
Length: 105
Type: CDS
Position: Chr01:5548893..5549065 (+ strand)
Length: 173
Type: CDS
Position: Chr01:5549150..5549240 (+ strand)
Length: 91
Type: CDS
Position: Chr01:5549467..5549616 (+ strand)
Length: 150
Type: CDS
Position: Chr01:5550411..5550644 (+ strand)
Length: 234
Type: CDS
Position: Chr01:5550645..5550998 (+ strand)
Length: 354
Type: three_prime_UTR

>Vigan.01G069200.01 class=Sequence position=Chr01:5546082..5550998 (+ strand)
CTTTACTCAT TTTACTGGCT TTGATTCAGT GACTGTGGCA GAGGAGATGC ATGATGAATG ATGCATGCTG CATGGAACGG
TTAGGATTCA AGAGATCCAT GTGGGTTCTG TACCACATAA AATCCAAGCC ATTCCATTAC CAAACATTAC TTCTCTACGC
AAGATTGTTT TTTTTTTTAA TTTTTCTCAC TGCCAAACTA AAACGTTTCT TTCAATTTTG GATTTTGGCC ATGTCTTTGT
CAAGTTAGAC ATGATCAGTA CCTAGTCATT AATTGTGTGC CACATTATCT TCGAACTTTT CCATGGCTGA GAACTCACTC
TGGTTATGCT TATATACATG TAAATGCAAG TTAATGCAGA TTTTGAAATT TTAGTTTTGG ACATCACTAC CAAAGATTTA
TCTGCTTCTT GTCCTACCAT GAAAAGCCTC TGCCTTGGGC CGTTCCTTGC TGTTAGGTGC GTGTTTTATT TTCTTCCACC
TTTTGTATTC ATTAAGGCGG TGATTGTTCA TGTGATTTTT ATTTATTTTG TGATATGAAA ACAAGATGGT CAATGCAACT
TGATGGGAAG TATAATCACC CAAAATAATC ATAGAATTGC TGAATATAAG TTGGAAAAAA AACTGCAATT TTCATCGTAA
TTGGTGGGCT TCTTATCCTA GTTCTTATAA TTAACAGTGA CCCAGTTAGT TCAAGAGCCT TTGGAGGCCA TATAACCAGA
AAGTGCTTCC CCAAGCAAGT TCATTTCCAC TCCCGTTCTT TTGTTTTCTC TTCAATCTTG TAAGCCCTCT CTTGCCCTCC
ACCTTTTTTG GTCATGAGGT GTTCTAATTG TATTTTGCTC AATTATGATG TTCTTTTTAT GTGGTTTGGT TGCATGTATA
TATATGGTTT ATCTTGTGAA GATGTTCTGC AACTCTATCA GTATTGCCAG AATTAGAAGA GAAGCAGATA TTTGATGGAG
AGAAGGCTAA TTTGCTTGTT AGAGATCTCA GAAAGTGCTT TGATTCAGGC AGGACAAAGA GTTATGAATG GAGGGTTTCC
CAGTTGGAGG CCATTATTAA GATGTTAAAA GAGAAAGAAA AGGAAATTAC TGAAGCTCTA TATAAGGATC TTGCTAAACC
TCAACTTGAA GCATTTATAT CTGAGGTCTT CAATTTCCTG CTTCTGTTAT GCATTAGTTT ATGAAATTCT TTACATTTTC
TTTTTCTCGA TTCCCTTTTG TCATGATGCC ATTTACTGTT TCCATTTGTC CGGTAGTCTT GTCAGCCTCA CTATCGTCAT
GGTCACATCA GATTTGATGT AAGTGTTTCT GCAGGTTTCC CAGGCAAAAT CCTCATGCAG TGAAGCACTT AAGGAGCTGA
AACAATGGAT GAAGCCTGAG AGGGTAAATT GCAAGACGAG CAATAAGTTC CAACATAGTT TTCTTAATTA ACAACCAAAT
TTCTTTTACC TTTTAGGTGA GTACTTCAAT CACGACATTT CCATCATCAG CAGAGATTGT GCCAGAACCG CTGGGGGTTG
TGTTGGTTAT CTCAACATGG AACTTTCCTT TCTGTATGTA AATGTTCCCT TTTCATTCTA TTCACATATC TATACAATGT
TTGGTTATAG TGAAGAACAA ATTTTCTTCA TCTCAATCGT TTTCGTCATC ATGGAGGACT TCTTTGGGAT GTGTTACTGT
AAATACAAAA CTTTCGCACA CTTTTCTTTC TGTCAAAATT CAAATTTCAC CAGTTATATC AAGCTCTAAA ATTCTCTCTG
TTCTCTGTAT GTGAATTTGG CCAACGTTTC TGGCCACTTG CTTAAATTTT CAATAAATTA GAGCCCAGTC TGTGATACTT
GTTCATTCTT CTCAATATCA CCACAGTCTT CCGGTATTCA TCAATGTATT CATATACTTT TTTTTGGAGG ATGATGCTTA
CTCTAATTTG TTGACTTAGC TTCTTTTGTA TGTCCTTTTT TTTCCAGTAA TTTGTTTTTA CTTCCTATAT TCAGTGTTAT
CAATGGATCC GGTTATTGGA GCCATTTCTG CGGGTAATGC AGTGGTCCTT AAACCATCAG AAATTGCTCC AGCAACATCA
TCACTTCTTG CAAATTTGGT CGAACAATAT TTAGACAACT CTGCCATCAG AGTTGTTGAA GGAGCTGTTC CTGAAACAAC
TGCACTCCTG GAGCAGAAAT GGGATAAGAT ACTTTATACA GGTAACTTGT CTTCTGGTAT TTATCCATAT CCTACAGCAA
ATAGATTCAT TTTAAGATGC CTGAAATTTG TATCTGATTA AACCTGTTTC ATATAAATGT CTGATCCTAT TAACACTTAT
TATAAGTTGT GTCCAGAAAT TTGAGTTAAC ACAGTTGAAA TTTTCGTTCT ATAATTAACA AGTCAAATGT ATGTAGCTCA
TTTATAAGGT TCCATGCATA ATCAACCCGT TTTTTGCAGG TAGTGCTAGA GTGGGTCGGA TTGTCCTGGC TGCGGCTGCA
AAGCATCTTA CACCAGTGAT TCTAGAACTT GGAGGAAAGT GCCCTGCTGT TGTTGAATCA GATGTCAACT TACAAGTAAC
ATCTTTGAAG GATCTCCTGA TTTACCCATC GAGTAACATA TTTTCATTTA TAGCAATCAT TGAATTTTCA GGTTACTGCT
AGGAGGATAA TAGCTGGCAA GTGGGCATGC AACAGTGGGC AAGCATGCAT TGCTGTTGAT TATGTCATCA CAAGAAAAGA
GTTTGCTCCA AAGCTGGTAA GGTTGCCTCA AAAATACAAA ATGCTGTGCA CTATTAAAAT ATATTACTCT TGATGAATTC
TCACTCAACA GATAAGTGCC TTAAAAGAAG AATTGGAACA ATTTTTTGGT AAAGATCCAT TGGAATCAAA AGACATGTCA
CGGATTGTGT CTTCTAACCA GTTTGCGCGG CTTGTGAAAC TCTTGGATGA GGATAAGGTA TCTGACAAAA TTGTTTTAGG
AGGTCAGAGG GATGAGAAGA AATTGTGAGT TGCATTCCTT TTTTAATTTT ATGATTGGAA TATTACTTAT AAGATATCAT
AACATCAGTT TCTTCCTTTA TATTGCAGAA AAATTTCCCC AACTATCATA TTAGGTGTTC CTGAAGATGC TTTGGTAATG
CAGGAGGAGA TATTTGGGCC AATATTGCCA ATCATCACAG TGAGTAATAG TTCACTATGA AAAAGTACAG TTTTAGACAT
GTTGACAAGG ATCATGGTTC ATGGTTCTTG GTAATTATTC TTGATGCAGT GAAAACATGT TCCATCTCAT TTATGACATT
TTTTTGTTTT CCTTTTCTAG TTGATAGTGA CCATTGTTTG ATTCCAACTC TTTTAAAATG TTTCTTTGTA CTTAGCATGG
AATTATTATA ATTATATTTT TGCAGGTAGA CAACATAGAA GATTGCTACA GTATAATCAA ATCAAGGCCA AAACCTCTTG
CTGCATATCT CTTCACAAAC AATGAGCAGC TGAAGAAGGA TTATGTGGAT AAGATATCGT CAGGAGGGAT ACTCATCAAT
GACGCTGTCA TCCATGTAGT TATCCTCTTC CTAAAATTCA CACATGAAAA ATTGTCATTT GCTAGCATAA TATTTTTTTT
CATAATTTTA TATACAGAAG CAAAAAGAAA AGTTGCGTCT CTTTATTTGA CATCTTTCAT TGGCATACAT AAAGTTATTG
AACTTAGTTT GAGAGAATTT CTGATGGTTG GCTGATATAA GTTGCTTGAA TCAATAAGTG AGGAAAGCCA TTGATTTTAT
CATTCTGGAA CAAATAATCC TTTAATTTCT TCAGAGGAAT ATAAATCTTA AAAATAAATG TCAAAGTTGA AGTGTTTTTT
TTGGAGTACG AACTATTAAG TTTTAGCTAT ACAGTTATAT TTATGATAGA GGATGAACAT TCATAAGAAG CTTTACTAAG
TTTCAATATT TTTGCTAGGT CAGAGTTGAA TCTCATTTTT GTCTTAAAAC ATGAAGTGGC TTATGTCAAG CATTGATTCA
TAGATTCAAA TAACACAAGA AGACAAAATG AAACAACAAA ATAATAAAAA CACAAGAATC ACATGCACTA ATTATAAAGA
GTTAATGGTG AGAGTATAAA AGCATTAGAA CAAGTAAAAT AAAATTGTAG TCTAAAGAAG TAGAAAAGAT GGAAAAGAAA
TAGAAATGGA GAACATGCTA CTTGAGACTA ACCCAATATA AATGCATCAG AGAATCACCT CTTATATTCC AAGAATTTCA
AGATAAAACT CAAAAGAAAA AAAATCACTC TCATAATAGA CAAATGTTCT AAAATGTGTT AATATGTAGA CACTTGTGTA
TGGTTGCAGG TTGCAACTCG TGGTTTGCCT TTTGGAGGAG TTGAAGAGAG TGGAATGGGT TGTTACCATG GAAAATTCTC
TTTTGATAGT TTCAGTCATA GGAAGTCAGT TCTCTATAGA AGTTTTGGTG CAGATTCATC CATAAGGTAC CCCCCATACA
CACCTGAGAA GGAAAAATTA TTGAAGGCCA TTATCAGTGG CAATATTGTT CAAATAATTC TTGCTCTTTT TGGATGGTCT
TAAGGAGAAG GAATGATAGG GTTCCTTTAA AAATGTTCAT GAATTAGGAA GTCCTAAAAT AATGTGTTTG GGAGCAGTAA
CTTGTGGCTT CCAATTTGGT AAAAGTGGCA AAATTAAATT ACAATTTTTC CCCACAAGTT TTCAATCTCA TGAATTTGTT
CTTTGATTGC CATTAAATTA TTGATTGAGA TATCAAACAT AATGTGCCTG CTTTGATAGA AAAGGGTGTG GCAACACAGC
ATAACATGAA TGCAACTTTT GTTTTTTGTT TTTCTGTCAC CAAAATTGGA GTGTCAGTGA TCATATCAGG TATTACTGTT
AAAAGTAAGT TGAAAACTTC AAGTAAAGGT TGGATAC

>Vigan.01G069200.01
CTTTACTCAT TTTACTGGCT TTGATTCAGT GACTGTGGCA GAGGAGATGC ATGATGAATG ATGCATGCTG CATGGAACGG
TTAGGATTCA AGAGATCCAT GTGGGTTCTG TACCACATAA AATCCAAGCC ATTCCATTAC CAAACATTAC TTCTCTACGC
AAGATTGTTT TTTTTTTTAA TTTTTCTCAC TGCCAAACTA AAACGTTTCT TTCAATTTTG GATTTTGGCC ATGTCTTTGT
CAAGTTAGAC ATGATCAGTA CCTAGTCATT AATTGTGTGC CACATTATCT TCGAACTTTT CCATGGCTGA GAACTCACTC
TGGTTATGCT TATATACATG TAAATGCAAG TTAATGCAGA TTTTGAAATT TTAGTTTTGG ACATCACTAC CAAAGATTTA
TCTGCTTCTT GTCCTACCAT GAAAAGCCTC TGCCTTGGGC CGTTCCTTGC TGTTAGTGAC CCAGTTAGTT CAAGAGCCTT
TGGAGGCCAT ATAACCAGAA AGTGCTTCCC CAAGCAAGTT CATTTCCACT CCCGTTCTTT TGTTTTCTCT TCAATCTTAT
GTTCTGCAAC TCTATCAGTA TTGCCAGAAT TAGAAGAGAA GCAGATATTT GATGGAGAGA AGGCTAATTT GCTTGTTAGA
GATCTCAGAA AGTGCTTTGA TTCAGGCAGG ACAAAGAGTT ATGAATGGAG GGTTTCCCAG TTGGAGGCCA TTATTAAGAT
GTTAAAAGAG AAAGAAAAGG AAATTACTGA AGCTCTATAT AAGGATCTTG CTAAACCTCA ACTTGAAGCA TTTATATCTG
AGGTTTCCCA GGCAAAATCC TCATGCAGTG AAGCACTTAA GGAGCTGAAA CAATGGATGA AGCCTGAGAG GGTGAGTACT
TCAATCACGA CATTTCCATC ATCAGCAGAG ATTGTGCCAG AACCGCTGGG GGTTGTGTTG GTTATCTCAA CATGGAACTT
TCCTTTCTTG TTATCAATGG ATCCGGTTAT TGGAGCCATT TCTGCGGGTA ATGCAGTGGT CCTTAAACCA TCAGAAATTG
CTCCAGCAAC ATCATCACTT CTTGCAAATT TGGTCGAACA ATATTTAGAC AACTCTGCCA TCAGAGTTGT TGAAGGAGCT
GTTCCTGAAA CAACTGCACT CCTGGAGCAG AAATGGGATA AGATACTTTA TACAGGTAGT GCTAGAGTGG GTCGGATTGT
CCTGGCTGCG GCTGCAAAGC ATCTTACACC AGTGATTCTA GAACTTGGAG GAAAGTGCCC TGCTGTTGTT GAATCAGATG
TCAACTTACA AGTTACTGCT AGGAGGATAA TAGCTGGCAA GTGGGCATGC AACAGTGGGC AAGCATGCAT TGCTGTTGAT
TATGTCATCA CAAGAAAAGA GTTTGCTCCA AAGCTGATAA GTGCCTTAAA AGAAGAATTG GAACAATTTT TTGGTAAAGA
TCCATTGGAA TCAAAAGACA TGTCACGGAT TGTGTCTTCT AACCAGTTTG CGCGGCTTGT GAAACTCTTG GATGAGGATA
AGGTATCTGA CAAAATTGTT TTAGGAGGTC AGAGGGATGA GAAGAAATTA AAAATTTCCC CAACTATCAT ATTAGGTGTT
CCTGAAGATG CTTTGGTAAT GCAGGAGGAG ATATTTGGGC CAATATTGCC AATCATCACA GTAGACAACA TAGAAGATTG
CTACAGTATA ATCAAATCAA GGCCAAAACC TCTTGCTGCA TATCTCTTCA CAAACAATGA GCAGCTGAAG AAGGATTATG
TGGATAAGAT ATCGTCAGGA GGGATACTCA TCAATGACGC TGTCATCCAT GTTGCAACTC GTGGTTTGCC TTTTGGAGGA
GTTGAAGAGA GTGGAATGGG TTGTTACCAT GGAAAATTCT CTTTTGATAG TTTCAGTCAT AGGAAGTCAG TTCTCTATAG
AAGTTTTGGT GCAGATTCAT CCATAAGGTA CCCCCCATAC ACACCTGAGA AGGAAAAATT ATTGAAGGCC ATTATCAGTG
GCAATATTGT TCAAATAATT CTTGCTCTTT TTGGATGGTC TTAAGGAGAA GGAATGATAG GGTTCCTTTA AAAATGTTCA
TGAATTAGGA AGTCCTAAAA TAATGTGTTT GGGAGCAGTA ACTTGTGGCT TCCAATTTGG TAAAAGTGGC AAAATTAAAT
TACAATTTTT CCCCACAAGT TTTCAATCTC ATGAATTTGT TCTTTGATTG CCATTAAATT ATTGATTGAG ATATCAAACA
TAATGTGCCT GCTTTGATAG AAAAGGGTGT GGCAACACAG CATAACATGA ATGCAACTTT TGTTTTTTGT TTTTCTGTCA
CCAAAATTGG AGTGTCAGTG ATCATATCAG GTATTACTGT TAAAAGTAAG TTGAAAACTT CAAGTAAAGG TTGGATAC

>Vigan.01G069200.01
ATGCAAGTTA ATGCAGATTT TGAAATTTTA GTTTTGGACA TCACTACCAA AGATTTATCT GCTTCTTGTC CTACCATGAA
AAGCCTCTGC CTTGGGCCGT TCCTTGCTGT TAGTGACCCA GTTAGTTCAA GAGCCTTTGG AGGCCATATA ACCAGAAAGT
GCTTCCCCAA GCAAGTTCAT TTCCACTCCC GTTCTTTTGT TTTCTCTTCA ATCTTATGTT CTGCAACTCT ATCAGTATTG
CCAGAATTAG AAGAGAAGCA GATATTTGAT GGAGAGAAGG CTAATTTGCT TGTTAGAGAT CTCAGAAAGT GCTTTGATTC
AGGCAGGACA AAGAGTTATG AATGGAGGGT TTCCCAGTTG GAGGCCATTA TTAAGATGTT AAAAGAGAAA GAAAAGGAAA
TTACTGAAGC TCTATATAAG GATCTTGCTA AACCTCAACT TGAAGCATTT ATATCTGAGG TTTCCCAGGC AAAATCCTCA
TGCAGTGAAG CACTTAAGGA GCTGAAACAA TGGATGAAGC CTGAGAGGGT GAGTACTTCA ATCACGACAT TTCCATCATC
AGCAGAGATT GTGCCAGAAC CGCTGGGGGT TGTGTTGGTT ATCTCAACAT GGAACTTTCC TTTCTTGTTA TCAATGGATC
CGGTTATTGG AGCCATTTCT GCGGGTAATG CAGTGGTCCT TAAACCATCA GAAATTGCTC CAGCAACATC ATCACTTCTT
GCAAATTTGG TCGAACAATA TTTAGACAAC TCTGCCATCA GAGTTGTTGA AGGAGCTGTT CCTGAAACAA CTGCACTCCT
GGAGCAGAAA TGGGATAAGA TACTTTATAC AGGTAGTGCT AGAGTGGGTC GGATTGTCCT GGCTGCGGCT GCAAAGCATC
TTACACCAGT GATTCTAGAA CTTGGAGGAA AGTGCCCTGC TGTTGTTGAA TCAGATGTCA ACTTACAAGT TACTGCTAGG
AGGATAATAG CTGGCAAGTG GGCATGCAAC AGTGGGCAAG CATGCATTGC TGTTGATTAT GTCATCACAA GAAAAGAGTT
TGCTCCAAAG CTGATAAGTG CCTTAAAAGA AGAATTGGAA CAATTTTTTG GTAAAGATCC ATTGGAATCA AAAGACATGT
CACGGATTGT GTCTTCTAAC CAGTTTGCGC GGCTTGTGAA ACTCTTGGAT GAGGATAAGG TATCTGACAA AATTGTTTTA
GGAGGTCAGA GGGATGAGAA GAAATTAAAA ATTTCCCCAA CTATCATATT AGGTGTTCCT GAAGATGCTT TGGTAATGCA
GGAGGAGATA TTTGGGCCAA TATTGCCAAT CATCACAGTA GACAACATAG AAGATTGCTA CAGTATAATC AAATCAAGGC
CAAAACCTCT TGCTGCATAT CTCTTCACAA ACAATGAGCA GCTGAAGAAG GATTATGTGG ATAAGATATC GTCAGGAGGG
ATACTCATCA ATGACGCTGT CATCCATGTT GCAACTCGTG GTTTGCCTTT TGGAGGAGTT GAAGAGAGTG GAATGGGTTG
TTACCATGGA AAATTCTCTT TTGATAGTTT CAGTCATAGG AAGTCAGTTC TCTATAGAAG TTTTGGTGCA GATTCATCCA
TAAGGTACCC CCCATACACA CCTGAGAAGG AAAAATTATT GAAGGCCATT ATCAGTGGCA ATATTGTTCA AATAATTCTT
GCTCTTTTTG GATGGTCTTA A

>Vigan.01G069200.01
MQVNADFEIL VLDITTKDLS ASCPTMKSLC LGPFLAVSDP VSSRAFGGHI TRKCFPKQVH FHSRSFVFSS ILCSATLSVL
PELEEKQIFD GEKANLLVRD LRKCFDSGRT KSYEWRVSQL EAIIKMLKEK EKEITEALYK DLAKPQLEAF ISEVSQAKSS
CSEALKELKQ WMKPERVSTS ITTFPSSAEI VPEPLGVVLV ISTWNFPFLL SMDPVIGAIS AGNAVVLKPS EIAPATSSLL
ANLVEQYLDN SAIRVVEGAV PETTALLEQK WDKILYTGSA RVGRIVLAAA AKHLTPVILE LGGKCPAVVE SDVNLQVTAR
RIIAGKWACN SGQACIAVDY VITRKEFAPK LISALKEELE QFFGKDPLES KDMSRIVSSN QFARLVKLLD EDKVSDKIVL
GGQRDEKKLK ISPTIILGVP EDALVMQEEI FGPILPIITV DNIEDCYSII KSRPKPLAAY LFTNNEQLKK DYVDKISSGG
ILINDAVIHV ATRGLPFGGV EESGMGCYHG KFSFDSFSHR KSVLYRSFGA DSSIRYPPYT PEKEKLLKAI ISGNIVQIIL
ALFGWS*