Variant information

Chr01:5546082 - 5550998

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5546174AT381408.771.00DOWNSTREAM(|2384||None|Vigan.01G069100.01), UTR_5_PRIME(|251||None|Vigan.01G069200.01)Vigna nepalensis
5546237TC562552.771.00DOWNSTREAM(|2447||None|Vigan.01G069100.01), UTR_5_PRIME(|188||None|Vigan.01G069200.01)Vigna nepalensis
5546256TA602803.771.00DOWNSTREAM(|2466||None|Vigan.01G069100.01), UTR_5_PRIME(|169||None|Vigan.01G069200.01)Vigna nepalensis
5546274CA673017.771.00DOWNSTREAM(|2484||None|Vigan.01G069100.01), UTR_5_PRIME(|151||None|Vigan.01G069200.01)Vigna nepalensis
5546473AT501968.771.00DOWNSTREAM(|2683||None|Vigan.01G069100.01), STOP_GAINED(NONSENSE|Aaa/Taa|K17*|None|Vigan.01G069200.01)Vigna nepalensis
5546492GT511984.771.00DOWNSTREAM(|2702||None|Vigan.01G069100.01), NON_SYNONYMOUS_CODING(MISSENSE|tGt/tTt|C23F|None|Vigan.01G069200.01)Vigna nepalensis
5546583GT461799.771.00DOWNSTREAM(|2793||None|Vigan.01G069100.01), INTRON(|||None|Vigan.01G069200.01)Vigna nepalensis
5547027AT451792.771.00DOWNSTREAM(|3237||None|Vigan.01G069100.01), NON_SYNONYMOUS_CODING(MISSENSE|cAg/cTg|Q87L|None|Vigan.01G069200.01)Vigna nepalensis
5547266AC562268.771.00DOWNSTREAM(|3476||None|Vigan.01G069100.01), INTRON(|||None|Vigan.01G069200.01)Vigna nepalensis
5547280TG602320.771.00DOWNSTREAM(|3490||None|Vigan.01G069100.01), INTRON(|||None|Vigan.01G069200.01)Vigna nepalensis
5548364CG682609.771.00DOWNSTREAM(|4574||None|Vigan.01G069100.01), INTRON(|||None|Vigan.01G069200.01)Vigna nepalensis
5548435GA722950.771.00DOWNSTREAM(|4645||None|Vigan.01G069100.01), INTRON(|||None|Vigan.01G069200.01)Vigna nepalensis
5548447GT662706.771.00DOWNSTREAM(|4657||None|Vigan.01G069100.01), INTRON(|||None|Vigan.01G069200.01)Vigna nepalensis
5550223AT652679.771.00INTRON(|||None|Vigan.01G069200.01)Vigna nepalensis
5550529GA552183.771.00NON_SYNONYMOUS_CODING(MISSENSE|gGt/gAt|G529D|None|Vigan.01G069200.01), UPSTREAM(|4767||None|Vigan.01G069300.01)Vigna nepalensis
5550886CT632548.771.00UPSTREAM(|4410||None|Vigan.01G069300.01), UTR_3_PRIME(|242||None|Vigan.01G069200.01)Vigna nepalensis
5550985TA552206.771.00UPSTREAM(|4311||None|Vigan.01G069300.01), UTR_3_PRIME(|341||None|Vigan.01G069200.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5546913ATA531783.731.00DOWNSTREAM(|3124||None|Vigan.01G069100.01), INTRON(|||None|Vigan.01G069200.01)Vigna nepalensis