GBrowse Details

Vigan.01G066700.01

Basic Information:
Name: Vigan.01G066700.01
Multiple alignment
Variant Information
Position: Chr01:5282927..5286986 (+ strand)
Length: 4060
Functional Information:
Description: Similar to Uncharacterized protein. [Q43466, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:37.76,24.15,27.96,37.53,26.02,25.80,42.26,44.01
Arabidopsis thaliana homolog: AT1G10940.2, AT1G60940.1, AT2G23030.1, AT5G08590.1, AT5G63650.1
Automatic updates:
Name: NM_001249814 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein kinase 3 (SPK-3), mRNA.
PubMed ID: 9267431 NCBI(pubmed)
Status: Known Variant
Name: NM_001255671 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase SRK2A-like (LOC100804018), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:5282927..5283512 (+ strand)
Length: 586
Type: five_prime_UTR
Position: Chr01:5283513..5283632 (+ strand)
Length: 120
Type: CDS
Position: Chr01:5284154..5284228 (+ strand)
Length: 75
Type: CDS
Position: Chr01:5284326..5284427 (+ strand)
Length: 102
Type: CDS
Position: Chr01:5284517..5284570 (+ strand)
Length: 54
Type: CDS
Position: Chr01:5284665..5284757 (+ strand)
Length: 93
Type: CDS
Position: Chr01:5284850..5284942 (+ strand)
Length: 93
Type: CDS
Position: Chr01:5285239..5285343 (+ strand)
Length: 105
Type: CDS
Position: Chr01:5285434..5285532 (+ strand)
Length: 99
Type: CDS
Position: Chr01:5286297..5286611 (+ strand)
Length: 315
Type: CDS
Position: Chr01:5286612..5286986 (+ strand)
Length: 375
Type: three_prime_UTR

>Vigan.01G066700.01 class=Sequence position=Chr01:5282927..5286986 (+ strand)
AAAAAAAAGA GAAGGTAGCT TGTGAAAACG ACAAAGAAGA TTGAGGAATG AAGAGAAAGG AGTCCCTGTC CTGTCCCCTA
CAGCATCGGC GTTGTAAGAG ATCCCATTCC AAATACCAAT TCCAAATTTG CAATCTCAAT TCTCAGTTTC ACAACTCAAA
TAAAAAACCA AACCAAAAGG GTACTCACTA ATTAACTGGA TTCAAGCTGG TTTGCCTTCA TCTTCTTCAT CTTCATTGAT
TAGATCCCAT CCTACCCCAA TTTTCTAATG TTTTCTCTCT CACTCTCCCA CGTGCACTTT CTTCTCTCCC GCTCTAAATA
ATTCTTCATT CCCACCCCCC AATCTCTCTC TCTATACATA TATTACACAT TATTGTATGT GTGTGTGGAA AAAGAACCGT
TTTTTTTTAT CAGTGAAAGG GACCACCTTT ATATAACCCT TTTGATCAAA GTGTAAAATG GTGTTGTGAT TCTACAAGGG
TCTTGCATGC CCCCTCTGAG TTTCAAGTTT CAAGTTTGAA CCCCCTTTCT TCCATTCGTA ATCGTAATAA CAGGCAGCAT
CTTTGGTTGA GTTGAGGGAT TTGATTATGG AAAAGTATGA GGCTGTCAAG GATTTGGGGG CTGGGAATTT TGGGGTGGCC
AGGCTCATGA GGAACAAGGA GACCAAGGAG CTTGTTGCCA TGAAATACAT CGAGCGTGGT CAAAAGGTTT CTTTTTTCTT
TCTTTCTTTC TTTCTTTTAA AAAAAAGTAT AATCGAATTT TATTTTTTCA TTTCTTCAAT CTTCAGATTT GTTATTGCTT
GCACGTTTTG CATGTGAAAT GATGATTAAT GAAGGGCATG TGAGGTTGAA GCTCTGATTT GTGAAAAGTG AAAAATCTGG
GAAAGGTGTT ACATGGTTTT TTGTCACAAT TTCATTACGC GTGATCGAAA GAAATGTAGG AAGTGATGGA AAATACAATT
ATAAACTATC TTGTTTTTAA ATGTGTAGTA GCTCTTTCCT GGAGATAGTT GATTCTGTTT ACTGATTATT ATGAACTGAT
TTTCTTTCAC TAAATCTTTG AGTTGGCTAA TCCAACGCAT GGCTTGTATT CTGCTGTAAA ACCAAGCAGA CTAGATGGAG
ATGTTCATAT TCTTTTATTT GTTTCTTGTT TTTAATTTCT ATTTATGAAA TTGAAAAGCT ATTGTTTTGG CTTCTAAAAG
TTTTATTCAC CCCTTCTGCA ATTCCAGATT GACGAGAATG TGGCAAGAGA GATTATCAAC CACAGATCCC TTCGGCACCC
CAATATCATT CGCTTCAAGG AGGCAAGGAT TTAAGCTGTT GGCATATTGG ATTATTTGGT ATTGAGTACT TTATTTTATT
AAATTATTTA CTCATTTAAA TCGTATTTTG GTTTTGTAGG TGGTTTTGAC GCCCACTCAT TTGGCCATAG TGATGGAGTA
TGCCGCTGGA GGAGAGCTCT TTGAGAGGAT ATGCAATGCT GGCAGGTTCA GTGAAGATGA GGTTGATAAC TTCCTCGTGG
GATTTTCTTC ACACCCTTAG TACCTTTTCT TGTATCCATG TCTCATTTAT TTTCCCCTTT GATTGTGCAG GCTAGATATT
TCTTTCAGCA GCTTATTTCT GGTGTGCACT ACTGTCATGC CATGGTATAA TAATTCTAAA GTTCTTGAAA AATGATTGAA
CTTCTCCTCT CAGAATTGTA CAAAGTGAGA ACCTATGATT TTACTCCTTT TTTTGCAGCA AATTTGCCAC AGAGATTTGA
AGTTAGAAAA CACACTTTTA GATGGTAGCC CTGCACCCCG CTTGAAAATT TGTGACTTTG GCTATTCCAA GGTACCACAA
TGATTAGATT AACACTAGTT TCAAAGTTGT AATAATATGC ACCTTAGCCT CATATGTCTG AACGTTTCTG ATTTTTGGTT
TAGTCATCTC TGCTTCATTC ACGACCCAAA TCAACTGTTG GAACTCCAGC TTATATAGCA CCAGAGGTTC TTTCCAGGAG
GGAGTATGAT GGGAAGGTAT GTACTCTACA GTCTACATAT ATTTGGTTCT TTATAGTTCC CTATATCTTT GTATGTGTGG
CTGTGTTTTA GGATGTTAAC ATCATCTTTC TGTCTGCTGC ATGTCAGTCT TTGGGTTTAT TTGAATAGGG AGAGGGGAGA
TTTCTTTTCA TTTCTTGTTA CACCTTGCCT ATCTCTAATT TTGTAGCTTT GTTTCTTTGA CCATGCTACC TGGAAAAGTC
TTTATATGTA TATCTACTAT AACCAATATA TCAATGAATC TAATTAATGT TCTATTCTAA AAATTGTTTT AGTTGGCTGA
TGTATGGTCA TGTGGAGTGA CTCTTTATGT GATGCTGGTT GGAGCTTACC CTTTTGAGGA TCAGGATGAC CCTAGGAATT
TTAGGAAAAC AATTCAGGTA CAGTACTATC ACTGTTAATA CTGATTCTGA TACTCTTTCA TGCTATATTC TCATTATCTT
ACCCATATTT CCCGTTCTCA TCTGCAGCGA ATAATGGCTG TTCAATACAA AATCCCTGAT TATGTTCACA TATCTCAAGA
CTGCAGACAC CTCCTTTCTC GTATATTTGT AGCAAATCCA TTAAGGGTAT GTTATAATTT TCAAGTAACT CTTGTTTCCT
TCTTACATTT CAATTTGGAC AAACTATCTT AACCGTATTA TAATCCTGAG TTACAATTAT GTTATTCTGT TGACTTGTAA
CCCTTGCGAA TCATAATGTT GATGAGAAAT AATCAAGCTG GTGAAATAAA CCCTGTTGAC TGAAAGCTAT ACCTATTGGG
AAGTTCTACA CCCAACCCCT ATTCTTTAAT AATCATCTGC TACCCTCTTG TTTAGTTGAT TGGTAAAGAT CAAAATTTTC
CATTTTCCCT CTTGTTAAGC TAGAACTTGA ATTGGGTATT CTTTTCTCTC CTCTGCACTG CTTTCCATAC TTCATGCTTA
GGTTTGTCAG AGATCCGGGA CAATGCAAAA TTTAGACTTG TACAATTTGA ACAGAATCTT ATCATATTTT ATGAAGAACT
AATGGTATTT TCTTTTCAAA ATTTTGGTGG CATGTACTGA CTCCGGAGAA TGAATTTGCT GGCTAATGGT TGTAAAAGTT
TAACATACAC TCAGTCCTTA TTAATTAAAT TACTTGTGTG GCTTTAAATC TATATAGAGC TCCCTATTTC TGATTCACCT
ATGTTATCTT CACTTCATTC ACCATTTTTG ATATGCTTTT AACAGAAGAC AACATTTTAA ACACAAACTT TGTGCTTTTG
AAAGTACACA TGACTGAATT TGATATCAGG AGTCAGTATG TAGTTTACAT CAAGCTAACT GCCACACCTG ATTCTCTCTA
TTGTCTGCAG AGAATCTCCC TTAAGGAAAT TAAGAACCAC CCATGGTTTT TGAAGAATCT TCCAAGAGAG CTAACTGAAT
CAGCTCAAGC TGTCTATTAC CAGAGAGGCA ACCCAAGTTT TTCTGTTCAA AGTGTGGAGG AGATAATGAA AATTGTGGGA
GAAGCAAGGG ACCCTCCTCC AGTTTCTAGG CCTGTCAAAG GTTTTGGCTG GGACGGTGAA GAAGAGGAAG GGGAAGAAGA
TGTGAAGGAA GAGGAGGATG AAGAAGATGA ATATGACAAG AGGGTGAAGG AAGTTCATGC CAGTGGAGAA TTTCAAATCA
GTTAAGCAGT ATAATTCTTG TGTTCTTGGT TAAAGTTTCA TTTTTTATGC TAGAAGTCAC CTATTTTTAT GTGTACTATA
ATTTATATTA ACTACTATAA ACCAGCGAGG CAGTCTAAGT CACTGCACTG TCCACTGTCC ATGTAATGTA TTAGTATTAC
CTGTATCACC ATGGAAGTCG TGTATGAAAA CAGTAGTTGT CTGATAACTT TTAAATTACT CATCCATTTA TAATCCAGCT
AGTTAACTTT AAAATGCTTT TATATCACAC GAAACAATGA CCTCAACCAT GTATTGTGCC TTAAGTTCTT GTACTTGGTT
CTGGTTTACT TTGAGAATGC TATATCACAG AAAGTGGATG ATTATCTTGC TCGAGTCAGA 

>Vigan.01G066700.01
AAAAAAAAGA GAAGGTAGCT TGTGAAAACG ACAAAGAAGA TTGAGGAATG AAGAGAAAGG AGTCCCTGTC CTGTCCCCTA
CAGCATCGGC GTTGTAAGAG ATCCCATTCC AAATACCAAT TCCAAATTTG CAATCTCAAT TCTCAGTTTC ACAACTCAAA
TAAAAAACCA AACCAAAAGG GTACTCACTA ATTAACTGGA TTCAAGCTGG TTTGCCTTCA TCTTCTTCAT CTTCATTGAT
TAGATCCCAT CCTACCCCAA TTTTCTAATG TTTTCTCTCT CACTCTCCCA CGTGCACTTT CTTCTCTCCC GCTCTAAATA
ATTCTTCATT CCCACCCCCC AATCTCTCTC TCTATACATA TATTACACAT TATTGTATGT GTGTGTGGAA AAAGAACCGT
TTTTTTTTAT CAGTGAAAGG GACCACCTTT ATATAACCCT TTTGATCAAA GTGTAAAATG GTGTTGTGAT TCTACAAGGG
TCTTGCATGC CCCCTCTGAG TTTCAAGTTT CAAGTTTGAA CCCCCTTTCT TCCATTCGTA ATCGTAATAA CAGGCAGCAT
CTTTGGTTGA GTTGAGGGAT TTGATTATGG AAAAGTATGA GGCTGTCAAG GATTTGGGGG CTGGGAATTT TGGGGTGGCC
AGGCTCATGA GGAACAAGGA GACCAAGGAG CTTGTTGCCA TGAAATACAT CGAGCGTGGT CAAAAGATTG ACGAGAATGT
GGCAAGAGAG ATTATCAACC ACAGATCCCT TCGGCACCCC AATATCATTC GCTTCAAGGA GGTGGTTTTG ACGCCCACTC
ATTTGGCCAT AGTGATGGAG TATGCCGCTG GAGGAGAGCT CTTTGAGAGG ATATGCAATG CTGGCAGGTT CAGTGAAGAT
GAGGCTAGAT ATTTCTTTCA GCAGCTTATT TCTGGTGTGC ACTACTGTCA TGCCATGCAA ATTTGCCACA GAGATTTGAA
GTTAGAAAAC ACACTTTTAG ATGGTAGCCC TGCACCCCGC TTGAAAATTT GTGACTTTGG CTATTCCAAG TCATCTCTGC
TTCATTCACG ACCCAAATCA ACTGTTGGAA CTCCAGCTTA TATAGCACCA GAGGTTCTTT CCAGGAGGGA GTATGATGGG
AAGTTGGCTG ATGTATGGTC ATGTGGAGTG ACTCTTTATG TGATGCTGGT TGGAGCTTAC CCTTTTGAGG ATCAGGATGA
CCCTAGGAAT TTTAGGAAAA CAATTCAGCG AATAATGGCT GTTCAATACA AAATCCCTGA TTATGTTCAC ATATCTCAAG
ACTGCAGACA CCTCCTTTCT CGTATATTTG TAGCAAATCC ATTAAGGAGA ATCTCCCTTA AGGAAATTAA GAACCACCCA
TGGTTTTTGA AGAATCTTCC AAGAGAGCTA ACTGAATCAG CTCAAGCTGT CTATTACCAG AGAGGCAACC CAAGTTTTTC
TGTTCAAAGT GTGGAGGAGA TAATGAAAAT TGTGGGAGAA GCAAGGGACC CTCCTCCAGT TTCTAGGCCT GTCAAAGGTT
TTGGCTGGGA CGGTGAAGAA GAGGAAGGGG AAGAAGATGT GAAGGAAGAG GAGGATGAAG AAGATGAATA TGACAAGAGG
GTGAAGGAAG TTCATGCCAG TGGAGAATTT CAAATCAGTT AAGCAGTATA ATTCTTGTGT TCTTGGTTAA AGTTTCATTT
TTTATGCTAG AAGTCACCTA TTTTTATGTG TACTATAATT TATATTAACT ACTATAAACC AGCGAGGCAG TCTAAGTCAC
TGCACTGTCC ACTGTCCATG TAATGTATTA GTATTACCTG TATCACCATG GAAGTCGTGT ATGAAAACAG TAGTTGTCTG
ATAACTTTTA AATTACTCAT CCATTTATAA TCCAGCTAGT TAACTTTAAA ATGCTTTTAT ATCACACGAA ACAATGACCT
CAACCATGTA TTGTGCCTTA AGTTCTTGTA CTTGGTTCTG GTTTACTTTG AGAATGCTAT ATCACAGAAA GTGGATGATT
ATCTTGCTCG AGTCAGA

>Vigan.01G066700.01
ATGGAAAAGT ATGAGGCTGT CAAGGATTTG GGGGCTGGGA ATTTTGGGGT GGCCAGGCTC ATGAGGAACA AGGAGACCAA
GGAGCTTGTT GCCATGAAAT ACATCGAGCG TGGTCAAAAG ATTGACGAGA ATGTGGCAAG AGAGATTATC AACCACAGAT
CCCTTCGGCA CCCCAATATC ATTCGCTTCA AGGAGGTGGT TTTGACGCCC ACTCATTTGG CCATAGTGAT GGAGTATGCC
GCTGGAGGAG AGCTCTTTGA GAGGATATGC AATGCTGGCA GGTTCAGTGA AGATGAGGCT AGATATTTCT TTCAGCAGCT
TATTTCTGGT GTGCACTACT GTCATGCCAT GCAAATTTGC CACAGAGATT TGAAGTTAGA AAACACACTT TTAGATGGTA
GCCCTGCACC CCGCTTGAAA ATTTGTGACT TTGGCTATTC CAAGTCATCT CTGCTTCATT CACGACCCAA ATCAACTGTT
GGAACTCCAG CTTATATAGC ACCAGAGGTT CTTTCCAGGA GGGAGTATGA TGGGAAGTTG GCTGATGTAT GGTCATGTGG
AGTGACTCTT TATGTGATGC TGGTTGGAGC TTACCCTTTT GAGGATCAGG ATGACCCTAG GAATTTTAGG AAAACAATTC
AGCGAATAAT GGCTGTTCAA TACAAAATCC CTGATTATGT TCACATATCT CAAGACTGCA GACACCTCCT TTCTCGTATA
TTTGTAGCAA ATCCATTAAG GAGAATCTCC CTTAAGGAAA TTAAGAACCA CCCATGGTTT TTGAAGAATC TTCCAAGAGA
GCTAACTGAA TCAGCTCAAG CTGTCTATTA CCAGAGAGGC AACCCAAGTT TTTCTGTTCA AAGTGTGGAG GAGATAATGA
AAATTGTGGG AGAAGCAAGG GACCCTCCTC CAGTTTCTAG GCCTGTCAAA GGTTTTGGCT GGGACGGTGA AGAAGAGGAA
GGGGAAGAAG ATGTGAAGGA AGAGGAGGAT GAAGAAGATG AATATGACAA GAGGGTGAAG GAAGTTCATG CCAGTGGAGA
ATTTCAAATC AGTTAA

>Vigan.01G066700.01
MEKYEAVKDL GAGNFGVARL MRNKETKELV AMKYIERGQK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIVMEYA
AGGELFERIC NAGRFSEDEA RYFFQQLISG VHYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV
GTPAYIAPEV LSRREYDGKL ADVWSCGVTL YVMLVGAYPF EDQDDPRNFR KTIQRIMAVQ YKIPDYVHIS QDCRHLLSRI
FVANPLRRIS LKEIKNHPWF LKNLPRELTE SAQAVYYQRG NPSFSVQSVE EIMKIVGEAR DPPPVSRPVK GFGWDGEEEE
GEEDVKEEED EEDEYDKRVK EVHASGEFQI S*