Variant information

Chr01:5282927 - 5286986

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5283894AT622478.771.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5284370CA461823.771.00SYNONYMOUS_CODING(SILENT|gcC/gcA|A80|None|Vigan.01G066700.01)Vigna nepalensis
5285586CG552213.771.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5285602TG552150.771.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5285877TG632586.771.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5285905GC582701.771.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5285923CG572536.771.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5286151TG532155.771.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5286411GA94344.770.15NON_SYNONYMOUS_CODING(MISSENSE|Gtt/Att|V286I|None|Vigan.01G066700.01)Vigna nepalensis
5286422GT97476.770.20SYNONYMOUS_CODING(SILENT|gtG/gtT|V289|None|Vigan.01G066700.01)Vigna nepalensis
5286467AG1001930.770.50SYNONYMOUS_CODING(SILENT|ccA/ccG|P304|None|Vigan.01G066700.01)Vigna nepalensis
5286698CG55971.770.53UTR_3_PRIME(|87||None|Vigan.01G066700.01)Vigna nepalensis
5286890CT20396.770.60UPSTREAM(|4970||None|Vigan.01G066800.01), UTR_3_PRIME(|279||None|Vigan.01G066700.01)Vigna nepalensis
5286929GA2199.770.24UPSTREAM(|4931||None|Vigan.01G066800.01), UTR_3_PRIME(|318||None|Vigan.01G066700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5283325GTG421223.731.00UTR_5_PRIME(|187||None|Vigan.01G066700.01)Vigna nepalensis
5283657TTTTC592578.731.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5283682AAATTTTAT532391.731.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5283789GAG491651.731.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5285940GGA472075.731.00INTRON(|||None|Vigan.01G066700.01)Vigna nepalensis
5286403GGT84246.730.14FRAME_SHIFT(|agt/agTt|S283S?|None|Vigan.01G066700.01)Vigna nepalensis
5286731GCACTGTCG281207.731.00UTR_3_PRIME(|121||None|Vigan.01G066700.01)Vigna nepalensis