GBrowse Details

Vigan.01G008100.01

Basic Information:
Name: Vigan.01G008100.01
Multiple alignment
Variant Information
Position: Chr01:486600..491077 (- strand)
Length: 4478
Functional Information:
Description: Similar to Uncharacterized protein. [Q4JEZ6, Glycine max]
GO: Biological Process: protein glycosylation (GO:0006486)
Molecular Function: sialyltransferase activity (GO:0008373)
InterPro: Glycosyl transferase, family 29 (IPR001675)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.22,2.88,5.99,4.65,6.82,6.33,6.06,5.76
Arabidopsis thaliana homolog: AT3G48820.1
Automatic updates:
Name: NM_001251512 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sialyltransferase-like (STV2B), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:486600..486944 (- strand)
Length: 345
Type: three_prime_UTR
Position: Chr01:486945..487140 (- strand)
Length: 196
Type: CDS
Position: Chr01:487643..487752 (- strand)
Length: 110
Type: CDS
Position: Chr01:488006..488087 (- strand)
Length: 82
Type: CDS
Position: Chr01:488181..488335 (- strand)
Length: 155
Type: CDS
Position: Chr01:488421..488485 (- strand)
Length: 65
Type: CDS
Position: Chr01:488571..488661 (- strand)
Length: 91
Type: CDS
Position: Chr01:488752..488944 (- strand)
Length: 193
Type: CDS
Position: Chr01:489329..489429 (- strand)
Length: 101
Type: CDS
Position: Chr01:489635..489712 (- strand)
Length: 78
Type: CDS
Position: Chr01:489935..490024 (- strand)
Length: 90
Type: CDS
Position: Chr01:490588..490661 (- strand)
Length: 74
Type: CDS
Position: Chr01:490763..490856 (- strand)
Length: 94
Type: CDS
Position: Chr01:490857..491077 (- strand)
Length: 221
Type: five_prime_UTR

>Vigan.01G008100.01 class=Sequence position=Chr01:486600..491077 (- strand)
CATAGTTCTA GCTTGTGCGA CAAGTCATGG AGTAAAAAGT AATTAAATTT CCCCAAAACC CAAAAGTTTA GTTTGAATAT
AATTACCCAA TAAAACGAAT TGAAGACGCA ATTAGCTTCA CAGAGGTAAA GATTTGAAAA TTGGAGTGTG TGGAGCAGAT
GTCGATACTA ATCAATCCAT AGATAAACCC CAAATCGATT TGTCGGCAAC TCAATAATCC GATGAGGGTT CTGCAACTCG
GTTTGTTTCT CGCTTTGGCA TGTGGATTTG CAGCCATTTC CATCTACATC ACCGGACTCT CGGATCCTTT TGTATGTATG
TATGTATTAC CTGTATCTTC TTCATATTGT AAGAGTTTTC TTCAACTGCG TTAAATCTTG TATTAATAAT GATAATAACA
ATGCAACCGC ACGCAGATCC CGGTTATCGC CTCACAGATG AAGACACCGA AGCATTGCTT TCGCTGCACG ACACTTTCCA
GAAGTGTGTG GTGAGGTTTT CCTCGGTTTC TTTAGTTTTC TTTCCCTCCG CGGCAAAAAC TTTTTTTTTT CTTCTGGTTT
CTGTGCTGCT GCATTTTCCT TCAAGCTAGG CTTATTGGCG GGTGTTGTTT TCGTGTACAA CATACAAGGC TGTTGCGTTA
TGTATGAATG TCATGAATAG GGATTTGGGT AGTGTTTTGT AAACCTGAAT TTTAGTTTGG TTCCAAATGG CTGCTACAAC
GTAAAACTAG ATTTTTTCTC ATTGAAGAAC AGTTCGATAC GAAATGCACC GATGTTGTGT ATTGGACCTT TGATATTGGT
ATGGAAACTC CTCAGCTAAG TTTCAGAAGA CTGTTTTTTA ATGCTAAAAA CTTTTACATT TTCTTTTGAA GGAATATTAT
TTATTGCTTT TAATTGCCCT TCTGCGTGGT ATATATGTTC GAGTAGTTTG TATTTGTTTT GTTTCAACGT GTTTTCTTAC
AGTTTCAACA CTTTATGCAT TTTTAGATCT TATATTCTAA GTGTGGGTTC TTTGAATAAT TCAACTGAGT TGCTACTTTT
GAGTTATATG CAGAGTGCAA ATGGACTTGG CCTAAAAGCA ACTAGGGGCA TTGATTATTG CCAAACCACA ATAAATTTCC
CCAGTGACAC TATCCCCAAA TGGGTAAATT TTCCTAATCA TTCACTGAAC ATATCCTTGT TCATGAAGGA AGAAAAAAAT
GCTGCATATG TGATTTTGTA ATATGTGTTA ATTTTGATAA CCTACAAGTT TGGGGGGAAA TAACTTCCTC CAATTCAGAA
GTATGGGCAG TGATATAATC ACATGGTTTA AACGAACTTA ACAATTAACC AATTTTTTGA CATCTGGAGT TTTCTGCATT
AACAGAAAGA TCCAAAAACT GGAGAACTTG AAGCTCTGTC TTTTGATTTT AATCTATGTG AAGCTGTGGC ATCATGGGAG
CAGGTAAGCA ACTTAGTCTC ATCGTGACTA GTCGGAAATC TAACATTTCT TTGTTATTAT ATACATCCTG ATACTTTTGA
TATCCTGTTG GATTAATATA CGAGAGTTTG AACTACTCTT CCCAGTCTAG ACATTAATGG CAACTTCCTT TCATTAGTTT
TTCTTTTTTT AACTGTAAAA GGAATAATGT CCTGAAATGA TTTCTCAGGT GCGGAACAGC ACCACTATCC TCACCAAGGA
ATTCATTGAT TCTTTACCAA ATGGATGGGA GGAATATGCA TGGCGTAGGA TCAATAAAGG AATACAGCTG TAAGTAATGT
GCAACTCAAT TTTACTGAAC AGTTAGTTAA TTATGAAATA ATGATATCCT ATAAGAATGA CCACCAAACT AAATTCCATT
TTAATTCATT TAGGATACTC TGTCAATTTG TCAGCCCTAA GACATTTATA TTTGGCTGTT GAGAAGCTAA CATATGCTGT
TGTTGAGGAG ATAAAACTTT GTCCGAGTTA TCTATTTCAC TCTACTCAAT TGCTATATAC AACATAAGTT TCTCAATATA
AAGCATAGAT ATCATGTTCT ATGTTTAATA TATATAATTT ATATTTAGTT ATGGACTTGA AGTCAGAGGT TCTTGCTTAG
AAGGAAATTA AAATTAGTGT AAAGTCTCAT AATAGGATCC CTTTATGTTG CAGCAACCGC TGTGAGAATA AGACCTTGTG
CATGGAGAAA CTTTCACTAG TTCTCCCCGA AACACCACCA TACTTCCCTA GACAGTTTGG GCGCTGTGCT GTTATTGGTA
ATTCAGGAGA CCTCTTGAAA ACAAAATTTG GAAACGAGAT AGATGGTTAT GAAGTTGTCA TTAGAGAAAA TGGTGCTCCA
ATTGAGGTTT GTCATTCAAC AGGTTGCTTC TTATGTTCTT TTGATTTTAT CCCAAAGATC AAGATCTCTA CCACTTAATA
TTGTTTATGA CTACAGAATT ACACTGATTA TGTGGGTAGG AAAAGCACAT TTCGCCTTCT AAACCGAGGA TCTGCTAAAG
CGCTAGATAA AGTTGTAGAG TTAGATGGTA TTACCACTTG TTTTCATGAG CTCCACTTGC TGCAATGTTA TTATGAGTCA
CTAATTCTTA CCATAAGTTG CTTTTTCTGC AGAACAAAGA AAAGAAGTGT TGATAGTAAA AACAACAATT CATGATATCA
TGAACAAAAT GATTCGGGTA TAGTTCCTTG TCAAAGGAAA TATTTCTTCG TCACACATTC TATGTTCCAT TTGCAATGCA
ATTGATTTTT TTTCTTCTGC AGGAGGTTCC TATAAAAAAT CCTGTGTACC TCATGCTAGG TGCATCCTTT GGCTCAGCAG
CAAAAGGAAC TGGACTTAAG GCTCTTGAAT TTGCTCTCTC TATGTGCGAT TCAGTGGATA TGTATGGTTT CACTGTAGAT
CCTGGTTATA AAGAATGGTA TTATATTTTC TTATAGCAAT GAGTATTACT GGTTAAATAC GTCTTTCTTT GGTTTACAAT
TACCTGATCA ATAATCCTTA TTTCTCGTAG GACAAGGTAT TTCTCTGAAT CCCGTCAAGG CCATACCCCA TTGCATGGAA
GAGCTTACTA TCAGATGATG GAATGCTTGG GGGTAAGTAG GCCATACTTG TGGAGGTCAT ACTTAAGCCA TATATTTTCC
ACATTATTTG CTGATGATTA TGTTAAACGT TGAAGTTTGC TGATGATTAT GTTAAACGTT GAAGTTTGCT GATGATTATG
TTAAACGTTG AAGTTTCATA AGCAAGAATG TATATTCCTT GTTGAATTTA TACTCACTAA TACAAGTATA ATCACGTTTC
TTATTTTTCA AATAATTGAT TTTTCTATCT GGTCCCATTT TCAAGCTTAT CAAAATTCAT TCTCCCATGC GAGCTGATCC
TAATCGTGTT GTAAAATGGG TTCCGAGCCA CCATATTATA AGAGCTGCTA GAATTGCATC GGAGAAATTA TTGAGGTAAA
TGATTTTACC CCATTGTTGC AAGTCTCTTA ATATTTCATG GCCTGTGCTC TTTTAGAACA AATATAAAGT TGTGATAAAT
TAATAGAATA TTTGTTTAGT TGTTTGTTAT TACCTTGTTG GTAGTAGCAG AAGGTATTAT TGGTCTTTGA TGTGCTCTAT
CGGGAGACCT CAAAAATATT GAAAGGTCAT GACCCTTTAG TATAACCTCG TTTGACATCG ATCATACGGC CCTGGTAGTG
CACTATTCTG AAGGCCGTAC TGAATCACTT TTCTATGAAC CTTCAATTTA TCTTCAATTG TAAAGGTCGA TCTATCAAAT
AGTTCACTAT TTTATGGGCA TATAATATTG ATCATCGACA CTTAATGCAC TATTCACAGT TCTGTTTGTG CACACTGAAC
ATGACATGAT ATTTATGTTG TTCAATATTA ATTGAGCGAG TACAGAAGGA TTGAATCCGA TAGTATTTGG AGACTCTAAT
ATTTATGGTT TTTACAGGAG AGTTGGAGGA GGATCTGAAG ATCCACTTGC TGTATGCTCC ATAATTAGGA AGCAAGTAAA
AAGAAATCTA AATGCAGTTT CGAAGCTCAG AAAGGCGGCA CTTGATCATT TAAGGTATGT GAAGAGAACA ACAATGTATC
CCTTAGAGCA TAGTCCTGGA CATGGGTCGC TTTGCACTGT ACCATCTGAT TAAACTGTAC TTAGATTGTG CAGAAAAATC
AAGGAAATTT ATTTAGTTAT TCTCATTCTT TTCTTCTTTC TGTTTTGAAA CCTTTAAAGG ACTTAGATTG GTTAGGCAGA
GGATTACAGA ACAACCAGGA GAAAATGTTG AGGCATCTGT AATGCATTGC TGAATTATAA CAATTTTAGT GTAATGAATA
ACTTTTGTTT TTCTTTAAAC ATTTAACCTC CGTAACTTTA GTATTCTAAG AAAGTTTGAT ATGTTCGTGT TTATGCCTTG
TTTGTGGTTT ACAGACTTGA GTTTTTATCA ATTTGATTTT ATAATTTTGA TTTTGGTTAG ATCTGAGTTT GAAGTAAC

>Vigan.01G008100.01
CATAGTTCTA GCTTGTGCGA CAAGTCATGG AGTAAAAAGT AATTAAATTT CCCCAAAACC CAAAAGTTTA GTTTGAATAT
AATTACCCAA TAAAACGAAT TGAAGACGCA ATTAGCTTCA CAGAGGTAAA GATTTGAAAA TTGGAGTGTG TGGAGCAGAT
GTCGATACTA ATCAATCCAT AGATAAACCC CAAATCGATT TGTCGGCAAC TCAATAATCC GATGAGGGTT CTGCAACTCG
GTTTGTTTCT CGCTTTGGCA TGTGGATTTG CAGCCATTTC CATCTACATC ACCGGACTCT CGGATCCTTT TGTATATCCC
GGTTATCGCC TCACAGATGA AGACACCGAA GCATTGCTTT CGCTGCACGA CACTTTCCAG AAGTGTGTGA GTGCAAATGG
ACTTGGCCTA AAAGCAACTA GGGGCATTGA TTATTGCCAA ACCACAATAA ATTTCCCCAG TGACACTATC CCCAAATGGA
AAGATCCAAA AACTGGAGAA CTTGAAGCTC TGTCTTTTGA TTTTAATCTA TGTGAAGCTG TGGCATCATG GGAGCAGGTG
CGGAACAGCA CCACTATCCT CACCAAGGAA TTCATTGATT CTTTACCAAA TGGATGGGAG GAATATGCAT GGCGTAGGAT
CAATAAAGGA ATACAGCTCA ACCGCTGTGA GAATAAGACC TTGTGCATGG AGAAACTTTC ACTAGTTCTC CCCGAAACAC
CACCATACTT CCCTAGACAG TTTGGGCGCT GTGCTGTTAT TGGTAATTCA GGAGACCTCT TGAAAACAAA ATTTGGAAAC
GAGATAGATG GTTATGAAGT TGTCATTAGA GAAAATGGTG CTCCAATTGA GAATTACACT GATTATGTGG GTAGGAAAAG
CACATTTCGC CTTCTAAACC GAGGATCTGC TAAAGCGCTA GATAAAGTTG TAGAGTTAGA TGAACAAAGA AAAGAAGTGT
TGATAGTAAA AACAACAATT CATGATATCA TGAACAAAAT GATTCGGGAG GTTCCTATAA AAAATCCTGT GTACCTCATG
CTAGGTGCAT CCTTTGGCTC AGCAGCAAAA GGAACTGGAC TTAAGGCTCT TGAATTTGCT CTCTCTATGT GCGATTCAGT
GGATATGTAT GGTTTCACTG TAGATCCTGG TTATAAAGAA TGGACAAGGT ATTTCTCTGA ATCCCGTCAA GGCCATACCC
CATTGCATGG AAGAGCTTAC TATCAGATGA TGGAATGCTT GGGGCTTATC AAAATTCATT CTCCCATGCG AGCTGATCCT
AATCGTGTTG TAAAATGGGT TCCGAGCCAC CATATTATAA GAGCTGCTAG AATTGCATCG GAGAAATTAT TGAGGAGAGT
TGGAGGAGGA TCTGAAGATC CACTTGCTGT ATGCTCCATA ATTAGGAAGC AAGTAAAAAG AAATCTAAAT GCAGTTTCGA
AGCTCAGAAA GGCGGCACTT GATCATTTAA GGTATGTGAA GAGAACAACA ATGTATCCCT TAGAGCATAG TCCTGGACAT
GGGTCGCTTT GCACTGTACC ATCTGATTAA ACTGTACTTA GATTGTGCAG AAAAATCAAG GAAATTTATT TAGTTATTCT
CATTCTTTTC TTCTTTCTGT TTTGAAACCT TTAAAGGACT TAGATTGGTT AGGCAGAGGA TTACAGAACA ACCAGGAGAA
AATGTTGAGG CATCTGTAAT GCATTGCTGA ATTATAACAA TTTTAGTGTA ATGAATAACT TTTGTTTTTC TTTAAACATT
TAACCTCCGT AACTTTAGTA TTCTAAGAAA GTTTGATATG TTCGTGTTTA TGCCTTGTTT GTGGTTTACA GACTTGAGTT
TTTATCAATT TGATTTTATA ATTTTGATTT TGGTTAGATC TGAGTTTGAA GTAAC

>Vigan.01G008100.01
ATGAGGGTTC TGCAACTCGG TTTGTTTCTC GCTTTGGCAT GTGGATTTGC AGCCATTTCC ATCTACATCA CCGGACTCTC
GGATCCTTTT GTATATCCCG GTTATCGCCT CACAGATGAA GACACCGAAG CATTGCTTTC GCTGCACGAC ACTTTCCAGA
AGTGTGTGAG TGCAAATGGA CTTGGCCTAA AAGCAACTAG GGGCATTGAT TATTGCCAAA CCACAATAAA TTTCCCCAGT
GACACTATCC CCAAATGGAA AGATCCAAAA ACTGGAGAAC TTGAAGCTCT GTCTTTTGAT TTTAATCTAT GTGAAGCTGT
GGCATCATGG GAGCAGGTGC GGAACAGCAC CACTATCCTC ACCAAGGAAT TCATTGATTC TTTACCAAAT GGATGGGAGG
AATATGCATG GCGTAGGATC AATAAAGGAA TACAGCTCAA CCGCTGTGAG AATAAGACCT TGTGCATGGA GAAACTTTCA
CTAGTTCTCC CCGAAACACC ACCATACTTC CCTAGACAGT TTGGGCGCTG TGCTGTTATT GGTAATTCAG GAGACCTCTT
GAAAACAAAA TTTGGAAACG AGATAGATGG TTATGAAGTT GTCATTAGAG AAAATGGTGC TCCAATTGAG AATTACACTG
ATTATGTGGG TAGGAAAAGC ACATTTCGCC TTCTAAACCG AGGATCTGCT AAAGCGCTAG ATAAAGTTGT AGAGTTAGAT
GAACAAAGAA AAGAAGTGTT GATAGTAAAA ACAACAATTC ATGATATCAT GAACAAAATG ATTCGGGAGG TTCCTATAAA
AAATCCTGTG TACCTCATGC TAGGTGCATC CTTTGGCTCA GCAGCAAAAG GAACTGGACT TAAGGCTCTT GAATTTGCTC
TCTCTATGTG CGATTCAGTG GATATGTATG GTTTCACTGT AGATCCTGGT TATAAAGAAT GGACAAGGTA TTTCTCTGAA
TCCCGTCAAG GCCATACCCC ATTGCATGGA AGAGCTTACT ATCAGATGAT GGAATGCTTG GGGCTTATCA AAATTCATTC
TCCCATGCGA GCTGATCCTA ATCGTGTTGT AAAATGGGTT CCGAGCCACC ATATTATAAG AGCTGCTAGA ATTGCATCGG
AGAAATTATT GAGGAGAGTT GGAGGAGGAT CTGAAGATCC ACTTGCTGTA TGCTCCATAA TTAGGAAGCA AGTAAAAAGA
AATCTAAATG CAGTTTCGAA GCTCAGAAAG GCGGCACTTG ATCATTTAAG GTATGTGAAG AGAACAACAA TGTATCCCTT
AGAGCATAGT CCTGGACATG GGTCGCTTTG CACTGTACCA TCTGATTAA

>Vigan.01G008100.01
MRVLQLGLFL ALACGFAAIS IYITGLSDPF VYPGYRLTDE DTEALLSLHD TFQKCVSANG LGLKATRGID YCQTTINFPS
DTIPKWKDPK TGELEALSFD FNLCEAVASW EQVRNSTTIL TKEFIDSLPN GWEEYAWRRI NKGIQLNRCE NKTLCMEKLS
LVLPETPPYF PRQFGRCAVI GNSGDLLKTK FGNEIDGYEV VIRENGAPIE NYTDYVGRKS TFRLLNRGSA KALDKVVELD
EQRKEVLIVK TTIHDIMNKM IREVPIKNPV YLMLGASFGS AAKGTGLKAL EFALSMCDSV DMYGFTVDPG YKEWTRYFSE
SRQGHTPLHG RAYYQMMECL GLIKIHSPMR ADPNRVVKWV PSHHIIRAAR IASEKLLRRV GGGSEDPLAV CSIIRKQVKR
NLNAVSKLRK AALDHLRYVK RTTMYPLEHS PGHGSLCTVP SD*