GBrowse Details

Vigan.01G002300.01

Basic Information:
Name: Vigan.01G002300.01
Multiple alignment
Variant Information
Position: Chr01:175543..178107 (+ strand)
Length: 2565
Functional Information:
Description: Similar to Uncharacterized protein. [I1KQM7, Glycine max]
GO: Molecular Function: acid phosphatase activity (GO:0003993)
Molecular Function: hydrolase activity (GO:0016787)
InterPro: Phosphoesterase domain (IPR004843)
Acid phosphatase, type 5 (IPR024927)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.31,0.65,4.76,1.18,10.31,43.84,0.55,5.22
Arabidopsis thaliana homolog: AT3G17790.1
Automatic updates:
Name: NM_001255621 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max purple acid phosphatase 17-like (LOC100816294), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:175543..175868 (+ strand)
Length: 326
Type: five_prime_UTR
Position: Chr01:175869..176045 (+ strand)
Length: 177
Type: CDS
Position: Chr01:176210..176366 (+ strand)
Length: 157
Type: CDS
Position: Chr01:176472..176579 (+ strand)
Length: 108
Type: CDS
Position: Chr01:176657..176784 (+ strand)
Length: 128
Type: CDS
Position: Chr01:176915..177043 (+ strand)
Length: 129
Type: CDS
Position: Chr01:177149..177216 (+ strand)
Length: 68
Type: CDS
Position: Chr01:177296..177509 (+ strand)
Length: 214
Type: CDS
Position: Chr01:177510..178107 (+ strand)
Length: 598
Type: three_prime_UTR

>Vigan.01G002300.01 class=Sequence position=Chr01:175543..178107 (+ strand)
TATTAACATA AATGTGGTAA TTATATCATT AACTTTTTCC ATTGGTAAGA GGAGGAGCAG CAGAGCATAG CATCCGAATA
TTCTGCCTCA TATGCCTTTC TCGTGAGATG GGTTTGGAAT ATGCTGCTCT TTCATGCTGA TTGGTCCCAC TCTTGCATGG
CATATTCGAA TATATCATCA CCCACTTCCT TCGATATCAT TGGATACGAT CTTTTTCTTT TCTATTTCCT TCATCGTCTC
TCTCCATAGT TACTCTCAAG TCTTACGTTG TTGCTCCACG TCATCCCAGA AAGCTTGCTC CTTCTGCTGT TCCAACCACA
CTCACCATGT CCATCTCCTT TCTCTTCACC CTCATCGTCA CCTCTGCCCT GTGTGTTCTT TCTGCATCTG CTCATCTCCA
GAGATTTCCA CACTCATCTA AACATGGTGC TTCTCTTAGC TTCTTGGTGG TCGGTGACTG GGGCAGAAGA GGCTCTTACA
ACCAATCACA AGTCGCTTTT CAGGTTTCTT TTTATGTTTC TTCATCCGAA ACATTTAGGT GTTGTATCAT TATTTAACTC
GTTTTCATCT TCTAGCATGT TATAGCGTCT GGTCTTATAG ATTGCTCCTG GTTGCATCCT TTAACGGATG AAAAATGTCA
TTTTTACTTC TGAAAATGAA CATGCAGATG GGAAAGGTGG GAGAGAAATA CGATGTAGAC TTTGTAGTTT CCACTGGGGA
CAATTTCTAT GACAATGGAC TAATCAGTGA ACACGACAAC GCGTTCGAAG AGTCGTTTAC CAAAATTTAC ACAGCAAAAA
GCCTGCAAAA GCGGTGGTAT AGCGGTAATT TTCTAAACAA ATAATGAAGA CGACAAAGGA GTTACATTAG AGTGCAGAGT
GTAGTAGATC TTGTCATATG CATAACCTTT TGTATCATGG TGGATGCAGT GTTAGGCAAC CACGACTACA GGGGTGATGC
AGAAGCCCAA CTCAGCCCAG TCCTTAGAAA AATGGATAGT AGATGGCTCT GCCTGAGATC ATTTATTGTA GATTCAGGTA
TTGTCTTTGC TTCTTTCGGG TTTATCTTCT AGGGGTTAAA ACCATTGCAG TAATCTGATG TACTTCTTCT ACAGAGCTGG
TTGAGATTTT CTTTGTAGAC ACCACTCCTT TTGTTCAAGA GTACTTCACT GAACCAAAGG AACACAAGTA CGATTGGCGT
GGCATTGGAC CACAGAAACC TTATGTTAAC AACTTACTCA AGGTATGCAT ACACGATTCC TTACTTTTTT ACTGCAAAAG
CTAACCATTT GAACAATTTG AAATATATGA AACTTGCAGA CTGGAAAATT ACATGAAGAT GGATTAAAAA TAATGTTTTG
AATCATTTTC AGGACCTAGA ATTGGCACTG GGGGAATCAA CTGCAAAATG GAAGATTGTT GTCGGTCACC ATGCCATTAG
AAGTGTTGGG CATCACGGTG ATACTCAAGA ACTTGTAGAG AAGCTGCTCC CGATCCTTCA GGTAACTAAA AGCTAAGAAC
TGAAGATGAT CCTCGTCTCC CTCCTTGTGT AAAATAATTT CCTAGTTCCT CTAACCAACT GGGCTGATTT TACTTTCAAA
TTTCAGGTAA ATAATATTGA CTTCTACATT AATGGGCATG ATCATTGTCT TCAACACATC AGTGACACAG AGAGGTAAAA
CTGAATGAAT TGATATTATA AAAGGAACGA AGCCAAAGTA ATGTATTTAT CTGATAAAGG AACTTGTTTG CAGCCCCATT
CAGTTCCTGA CTAGCGGGGC AGGGTCAAAG GCTTGGAGAG GAGACATTAA ACAAACGAAT CTAAGAGGCC TAAATTTCTT
CTATGATGGA CAAGGCTTCA TGTCCGTCAA ATTCACTCAG ACCGATGCCA CCTTTGAGTT CTATGATGTT TTTGGCAACG
TTTTGCACAG ACTGGCTTCT TCAAAACAGC TACATTCTTC CACGTAAAGT TCAGAGCCCA CTTTTGACGT TGAGATTCTA
AAACGAAGAC CGACCCAAAT TGGTTGAGAT CAAATTCAAA ACCAATCCTT GATGTCATGC TTCAGTATAA CAGAAATGAA
AATATGATGT CTCAACTCCA ACTTTTCCAT TGTGATTCAT CAGAGACGGA CTCGTAAAAT TTAAGGGCTT TCACTCCAAC
ATTACCAATC AATAATATAA TAATTGAATT GTTATCAGGA ATATGTGGTT TATAAACCTC GTTAAATCTA AAGCAATCCA
ACATTTCCAC TAGTCCTGAA TCCATTGATT TTGTAGATAA GAATTTGTAA GGATGGGGAA ATGGAAGCAT GCGTTGGTGA
TATCCAATAT CCACTGTCTT CTTATACGCC ACCATTAAAA TACGACTATG TTTTAACACC TGAGGACGTT TAAAAGACAA
ATAATTCAGG GATATAATTT GGAAATTTGA GAACAGCAAG AACACCGAAA TCCCATGAGG TGGTACAAAA GGAAATTCAC
TTACGATTGT TGACTTTTTT TTATGCTTTA TTACCTATTA AATAACTGCC TTTATTTCTA GGAAGGAATA AGTGGTACAT
CTTTT

>Vigan.01G002300.01
TATTAACATA AATGTGGTAA TTATATCATT AACTTTTTCC ATTGGTAAGA GGAGGAGCAG CAGAGCATAG CATCCGAATA
TTCTGCCTCA TATGCCTTTC TCGTGAGATG GGTTTGGAAT ATGCTGCTCT TTCATGCTGA TTGGTCCCAC TCTTGCATGG
CATATTCGAA TATATCATCA CCCACTTCCT TCGATATCAT TGGATACGAT CTTTTTCTTT TCTATTTCCT TCATCGTCTC
TCTCCATAGT TACTCTCAAG TCTTACGTTG TTGCTCCACG TCATCCCAGA AAGCTTGCTC CTTCTGCTGT TCCAACCACA
CTCACCATGT CCATCTCCTT TCTCTTCACC CTCATCGTCA CCTCTGCCCT GTGTGTTCTT TCTGCATCTG CTCATCTCCA
GAGATTTCCA CACTCATCTA AACATGGTGC TTCTCTTAGC TTCTTGGTGG TCGGTGACTG GGGCAGAAGA GGCTCTTACA
ACCAATCACA AGTCGCTTTT CAGATGGGAA AGGTGGGAGA GAAATACGAT GTAGACTTTG TAGTTTCCAC TGGGGACAAT
TTCTATGACA ATGGACTAAT CAGTGAACAC GACAACGCGT TCGAAGAGTC GTTTACCAAA ATTTACACAG CAAAAAGCCT
GCAAAAGCGG TGGTATAGCG TGTTAGGCAA CCACGACTAC AGGGGTGATG CAGAAGCCCA ACTCAGCCCA GTCCTTAGAA
AAATGGATAG TAGATGGCTC TGCCTGAGAT CATTTATTGT AGATTCAGAG CTGGTTGAGA TTTTCTTTGT AGACACCACT
CCTTTTGTTC AAGAGTACTT CACTGAACCA AAGGAACACA AGTACGATTG GCGTGGCATT GGACCACAGA AACCTTATGT
TAACAACTTA CTCAAGGACC TAGAATTGGC ACTGGGGGAA TCAACTGCAA AATGGAAGAT TGTTGTCGGT CACCATGCCA
TTAGAAGTGT TGGGCATCAC GGTGATACTC AAGAACTTGT AGAGAAGCTG CTCCCGATCC TTCAGGTAAA TAATATTGAC
TTCTACATTA ATGGGCATGA TCATTGTCTT CAACACATCA GTGACACAGA GAGCCCCATT CAGTTCCTGA CTAGCGGGGC
AGGGTCAAAG GCTTGGAGAG GAGACATTAA ACAAACGAAT CTAAGAGGCC TAAATTTCTT CTATGATGGA CAAGGCTTCA
TGTCCGTCAA ATTCACTCAG ACCGATGCCA CCTTTGAGTT CTATGATGTT TTTGGCAACG TTTTGCACAG ACTGGCTTCT
TCAAAACAGC TACATTCTTC CACGTAAAGT TCAGAGCCCA CTTTTGACGT TGAGATTCTA AAACGAAGAC CGACCCAAAT
TGGTTGAGAT CAAATTCAAA ACCAATCCTT GATGTCATGC TTCAGTATAA CAGAAATGAA AATATGATGT CTCAACTCCA
ACTTTTCCAT TGTGATTCAT CAGAGACGGA CTCGTAAAAT TTAAGGGCTT TCACTCCAAC ATTACCAATC AATAATATAA
TAATTGAATT GTTATCAGGA ATATGTGGTT TATAAACCTC GTTAAATCTA AAGCAATCCA ACATTTCCAC TAGTCCTGAA
TCCATTGATT TTGTAGATAA GAATTTGTAA GGATGGGGAA ATGGAAGCAT GCGTTGGTGA TATCCAATAT CCACTGTCTT
CTTATACGCC ACCATTAAAA TACGACTATG TTTTAACACC TGAGGACGTT TAAAAGACAA ATAATTCAGG GATATAATTT
GGAAATTTGA GAACAGCAAG AACACCGAAA TCCCATGAGG TGGTACAAAA GGAAATTCAC TTACGATTGT TGACTTTTTT
TTATGCTTTA TTACCTATTA AATAACTGCC TTTATTTCTA GGAAGGAATA AGTGGTACAT CTTTT

>Vigan.01G002300.01
ATGTCCATCT CCTTTCTCTT CACCCTCATC GTCACCTCTG CCCTGTGTGT TCTTTCTGCA TCTGCTCATC TCCAGAGATT
TCCACACTCA TCTAAACATG GTGCTTCTCT TAGCTTCTTG GTGGTCGGTG ACTGGGGCAG AAGAGGCTCT TACAACCAAT
CACAAGTCGC TTTTCAGATG GGAAAGGTGG GAGAGAAATA CGATGTAGAC TTTGTAGTTT CCACTGGGGA CAATTTCTAT
GACAATGGAC TAATCAGTGA ACACGACAAC GCGTTCGAAG AGTCGTTTAC CAAAATTTAC ACAGCAAAAA GCCTGCAAAA
GCGGTGGTAT AGCGTGTTAG GCAACCACGA CTACAGGGGT GATGCAGAAG CCCAACTCAG CCCAGTCCTT AGAAAAATGG
ATAGTAGATG GCTCTGCCTG AGATCATTTA TTGTAGATTC AGAGCTGGTT GAGATTTTCT TTGTAGACAC CACTCCTTTT
GTTCAAGAGT ACTTCACTGA ACCAAAGGAA CACAAGTACG ATTGGCGTGG CATTGGACCA CAGAAACCTT ATGTTAACAA
CTTACTCAAG GACCTAGAAT TGGCACTGGG GGAATCAACT GCAAAATGGA AGATTGTTGT CGGTCACCAT GCCATTAGAA
GTGTTGGGCA TCACGGTGAT ACTCAAGAAC TTGTAGAGAA GCTGCTCCCG ATCCTTCAGG TAAATAATAT TGACTTCTAC
ATTAATGGGC ATGATCATTG TCTTCAACAC ATCAGTGACA CAGAGAGCCC CATTCAGTTC CTGACTAGCG GGGCAGGGTC
AAAGGCTTGG AGAGGAGACA TTAAACAAAC GAATCTAAGA GGCCTAAATT TCTTCTATGA TGGACAAGGC TTCATGTCCG
TCAAATTCAC TCAGACCGAT GCCACCTTTG AGTTCTATGA TGTTTTTGGC AACGTTTTGC ACAGACTGGC TTCTTCAAAA
CAGCTACATT CTTCCACGTA A

>Vigan.01G002300.01
MSISFLFTLI VTSALCVLSA SAHLQRFPHS SKHGASLSFL VVGDWGRRGS YNQSQVAFQM GKVGEKYDVD FVVSTGDNFY
DNGLISEHDN AFEESFTKIY TAKSLQKRWY SVLGNHDYRG DAEAQLSPVL RKMDSRWLCL RSFIVDSELV EIFFVDTTPF
VQEYFTEPKE HKYDWRGIGP QKPYVNNLLK DLELALGEST AKWKIVVGHH AIRSVGHHGD TQELVEKLLP ILQVNNIDFY
INGHDHCLQH ISDTESPIQF LTSGAGSKAW RGDIKQTNLR GLNFFYDGQG FMSVKFTQTD ATFEFYDVFG NVLHRLASSK
QLHSST*