Variant information

Chr01:175543 - 178107

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
175743TA552149.771.00DOWNSTREAM(|577||None|Vigan.01G002200.01), UPSTREAM(|3486||None|Vigan.01G002400.01), UTR_5_PRIME(|126||None|Vigan.01G002300.01)Vigna nepalensis
176308CT652550.771.00DOWNSTREAM(|1142||None|Vigan.01G002200.01), SYNONYMOUS_CODING(SILENT|ttC/ttT|F92|None|Vigan.01G002300.01), UPSTREAM(|2921||None|Vigan.01G002400.01)Vigna nepalensis
176895AG642620.771.00DOWNSTREAM(|1729||None|Vigan.01G002200.01), INTRON(|||None|Vigan.01G002300.01), UPSTREAM(|2334||None|Vigan.01G002400.01)Vigna nepalensis
177150TC562255.771.00DOWNSTREAM(|1984||None|Vigan.01G002200.01), NON_SYNONYMOUS_CODING(MISSENSE|gTa/gCa|V234A|None|Vigan.01G002300.01), SPLICE_SITE_REGION(|||None|Vigan.01G002300.01), UPSTREAM(|2079||None|Vigan.01G002400.01)Vigna nepalensis
177243AG451848.771.00DOWNSTREAM(|2077||None|Vigan.01G002200.01), INTRON(|||None|Vigan.01G002300.01), UPSTREAM(|1986||None|Vigan.01G002400.01)Vigna nepalensis
177524TC482124.771.00DOWNSTREAM(|2358||None|Vigan.01G002200.01), UPSTREAM(|1705||None|Vigan.01G002400.01), UTR_3_PRIME(|15||None|Vigan.01G002300.01)Vigna nepalensis
177542AG562441.771.00DOWNSTREAM(|2376||None|Vigan.01G002200.01), UPSTREAM(|1687||None|Vigan.01G002400.01), UTR_3_PRIME(|33||None|Vigan.01G002300.01)Vigna nepalensis
177605CT542064.771.00DOWNSTREAM(|2439||None|Vigan.01G002200.01), UPSTREAM(|1624||None|Vigan.01G002400.01), UTR_3_PRIME(|96||None|Vigan.01G002300.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
176172GGAA441811.731.00DOWNSTREAM(|1007||None|Vigan.01G002200.01), INTRON(|||None|Vigan.01G002300.01), UPSTREAM(|3056||None|Vigan.01G002400.01)Vigna nepalensis
176385AAATG733325.731.00DOWNSTREAM(|1220||None|Vigan.01G002200.01), INTRON(|||None|Vigan.01G002300.01), UPSTREAM(|2843||None|Vigan.01G002400.01)Vigna nepalensis
177520CCA482113.731.00DOWNSTREAM(|2355||None|Vigan.01G002200.01), UPSTREAM(|1708||None|Vigan.01G002400.01), UTR_3_PRIME(|12||None|Vigan.01G002300.01)Vigna nepalensis