Variant information

Chr09:6675061 - 6677760

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6675130AG532032.771.00DOWNSTREAM(|4722||None|Vigan.09G050400.01), UPSTREAM(|2037||None|Vigan.09G050600.01), UPSTREAM(|3169||None|Vigan.09G050500.01), UTR_5_PRIME(|58||None|Vigan.09G050700.01)Vigna nepalensis
6675428TC632519.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2335||None|Vigan.09G050600.01), UPSTREAM(|3467||None|Vigan.09G050500.01)Vigna nepalensis
6675488CT652595.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2395||None|Vigan.09G050600.01), UPSTREAM(|3527||None|Vigan.09G050500.01)Vigna nepalensis
6675569TG692722.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2476||None|Vigan.09G050600.01), UPSTREAM(|3608||None|Vigan.09G050500.01)Vigna nepalensis
6675628CG602349.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2535||None|Vigan.09G050600.01), UPSTREAM(|3667||None|Vigan.09G050500.01)Vigna nepalensis
6675737CT421627.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2644||None|Vigan.09G050600.01), UPSTREAM(|3776||None|Vigan.09G050500.01)Vigna nepalensis
6675891AG562248.771.00NON_SYNONYMOUS_CODING(MISSENSE|Atg/Gtg|M82V|None|Vigan.09G050700.01), UPSTREAM(|2798||None|Vigan.09G050600.01), UPSTREAM(|3930||None|Vigan.09G050500.01)Vigna nepalensis
6675990CG492151.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2897||None|Vigan.09G050600.01), UPSTREAM(|4029||None|Vigan.09G050500.01)Vigna nepalensis
6676012TG501883.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2919||None|Vigan.09G050600.01), UPSTREAM(|4051||None|Vigan.09G050500.01)Vigna nepalensis
6676075TG512318.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2982||None|Vigan.09G050600.01), UPSTREAM(|4114||None|Vigan.09G050500.01)Vigna nepalensis
6676555AC512246.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|3462||None|Vigan.09G050600.01), UPSTREAM(|4594||None|Vigan.09G050500.01)Vigna nepalensis
6676556CG492246.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|3463||None|Vigan.09G050600.01), UPSTREAM(|4595||None|Vigan.09G050500.01)Vigna nepalensis
6676822TC552115.771.00NON_SYNONYMOUS_CODING(MISSENSE|Tct/Cct|S228P|None|Vigan.09G050700.01), UPSTREAM(|3729||None|Vigan.09G050600.01), UPSTREAM(|4861||None|Vigan.09G050500.01)Vigna nepalensis
6676935CT522072.771.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|3842||None|Vigan.09G050600.01), UPSTREAM(|4974||None|Vigan.09G050500.01)Vigna nepalensis
6677136GA441748.771.00NON_SYNONYMOUS_CODING(MISSENSE|gGt/gAt|G299D|None|Vigan.09G050700.01), UPSTREAM(|4043||None|Vigan.09G050600.01)Vigna nepalensis
6677555CT421670.771.00UPSTREAM(|4462||None|Vigan.09G050600.01), UTR_3_PRIME(|118||None|Vigan.09G050700.01)Vigna nepalensis
6677581CG461896.771.00UPSTREAM(|4488||None|Vigan.09G050600.01), UTR_3_PRIME(|144||None|Vigan.09G050700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
6675982TTGTGTCGTTGATTACTTAACTG502718.731.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2890||None|Vigan.09G050600.01), UPSTREAM(|4022||None|Vigan.09G050500.01)Vigna nepalensis
6676069TTC492240.731.00INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|2977||None|Vigan.09G050600.01), UPSTREAM(|4109||None|Vigan.09G050500.01)Vigna nepalensis
6676894CCT451019.730.96INTRON(|||None|Vigan.09G050700.01), UPSTREAM(|3802||None|Vigan.09G050600.01), UPSTREAM(|4934||None|Vigan.09G050500.01)Vigna nepalensis