VIGGS:Variant information

Chr08:7821148 - 7823929

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SNPs

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
7821332	C	A	51	2287.77	1.00	UTR_5_PRIME(\|12\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7821337	T	C	52	2296.77	1.00	UTR_5_PRIME(\|7\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7821539	C	A	42	1732.77	1.00	NON_SYNONYMOUS_CODING(MISSENSE\|Cag/Aag\|Q66K\|None\|Vigan.08G093500.01)	Vigna nepalensis
7821724	A	C	54	2169.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7822502	G	A	60	2439.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7822533	A	G	58	2300.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7822573	A	G	61	2279.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7822607	T	G	63	2457.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7822724	A	G	57	2296.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7822786	G	T	61	2457.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7823003	A	G	73	3274.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7823004	T	C	74	3274.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01)	Vigna nepalensis
7823025	T	C	79	3100.77	1.00	INTRON(\|\|\|None\|Vigan.08G093500.01), UPSTREAM(\|4984\|\|None\|Vigan.08G093600.01)	Vigna nepalensis
7823192	A	G	57	2229.77	1.00	SYNONYMOUS_CODING(SILENT\|ttA/ttG\|L176\|None\|Vigan.08G093500.01), UPSTREAM(\|4817\|\|None\|Vigan.08G093600.01)	Vigna nepalensis
7823288	T	G	50	2029.77	1.00	SYNONYMOUS_CODING(SILENT\|ggT/ggG\|G208\|None\|Vigan.08G093500.01), UPSTREAM(\|4721\|\|None\|Vigan.08G093600.01)	Vigna nepalensis
7823462	A	G	40	1567.77	1.00	SYNONYMOUS_CODING(SILENT\|aaA/aaG\|K266\|None\|Vigan.08G093500.01), UPSTREAM(\|4547\|\|None\|Vigan.08G093600.01)	Vigna nepalensis
7823624	G	T	44	1672.77	1.00	SYNONYMOUS_CODING(SILENT\|gtG/gtT\|V320\|None\|Vigan.08G093500.01), UPSTREAM(\|4385\|\|None\|Vigan.08G093600.01)	Vigna nepalensis