Variant information

Chr08:5605431 - 5608462

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5605435TA572249.771.00DOWNSTREAM(|1225||None|Vigan.08G070900.01), UPSTREAM(|4208||None|Vigan.08G071100.01), UTR_3_PRIME(|350||None|Vigan.08G071000.01)Vigna nepalensis
5605463CA491866.771.00DOWNSTREAM(|1253||None|Vigan.08G070900.01), UPSTREAM(|4180||None|Vigan.08G071100.01), UTR_3_PRIME(|322||None|Vigan.08G071000.01)Vigna nepalensis
5605691TC431784.771.00DOWNSTREAM(|1481||None|Vigan.08G070900.01), UPSTREAM(|3952||None|Vigan.08G071100.01), UTR_3_PRIME(|94||None|Vigan.08G071000.01)Vigna nepalensis
5605802TG532088.771.00DOWNSTREAM(|1592||None|Vigan.08G070900.01), SYNONYMOUS_CODING(SILENT|Aga/Cga|R203|None|Vigan.08G071000.01), UPSTREAM(|3841||None|Vigan.08G071100.01)Vigna nepalensis
5606193GA451838.771.00DOWNSTREAM(|1983||None|Vigan.08G070900.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|3450||None|Vigan.08G071100.01)Vigna nepalensis
5606462AC572344.771.00DOWNSTREAM(|2252||None|Vigan.08G070900.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|3181||None|Vigan.08G071100.01)Vigna nepalensis
5606707CT692738.771.00DOWNSTREAM(|2497||None|Vigan.08G070900.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|2936||None|Vigan.08G071100.01)Vigna nepalensis
5607308AT431750.771.00DOWNSTREAM(|3098||None|Vigan.08G070900.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|2335||None|Vigan.08G071100.01)Vigna nepalensis
5607408GA492161.771.00DOWNSTREAM(|3198||None|Vigan.08G070900.01), DOWNSTREAM(|4961||None|Vigan.08G071200.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|2235||None|Vigan.08G071100.01)Vigna nepalensis
5607506GC522024.771.00DOWNSTREAM(|3296||None|Vigan.08G070900.01), DOWNSTREAM(|4863||None|Vigan.08G071200.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|2137||None|Vigan.08G071100.01)Vigna nepalensis
5607540CG491899.771.00DOWNSTREAM(|3330||None|Vigan.08G070900.01), DOWNSTREAM(|4829||None|Vigan.08G071200.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|2103||None|Vigan.08G071100.01)Vigna nepalensis
5607552TC502012.771.00DOWNSTREAM(|3342||None|Vigan.08G070900.01), DOWNSTREAM(|4817||None|Vigan.08G071200.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|2091||None|Vigan.08G071100.01)Vigna nepalensis
5607730TA401615.771.00DOWNSTREAM(|3520||None|Vigan.08G070900.01), DOWNSTREAM(|4639||None|Vigan.08G071200.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|1913||None|Vigan.08G071100.01)Vigna nepalensis
5608163GA682638.771.00DOWNSTREAM(|3953||None|Vigan.08G070900.01), DOWNSTREAM(|4206||None|Vigan.08G071200.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|1480||None|Vigan.08G071100.01)Vigna nepalensis
5608460TC602424.771.00DOWNSTREAM(|3909||None|Vigan.08G071200.01), DOWNSTREAM(|4250||None|Vigan.08G070900.01), UPSTREAM(|1183||None|Vigan.08G071100.01), UTR_5_PRIME(|182||None|Vigan.08G071000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
5606212GGATAT321446.731.00DOWNSTREAM(|2003||None|Vigan.08G070900.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|3430||None|Vigan.08G071100.01)Vigna nepalensis
5606414GAG551754.731.00DOWNSTREAM(|2205||None|Vigan.08G070900.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|3228||None|Vigan.08G071100.01)Vigna nepalensis
5606742CGAC662848.731.00DOWNSTREAM(|2533||None|Vigan.08G070900.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|2900||None|Vigan.08G071100.01)Vigna nepalensis
5607385AAAAC442055.731.00DOWNSTREAM(|3176||None|Vigan.08G070900.01), DOWNSTREAM(|4983||None|Vigan.08G071200.01), INTRON(|||None|Vigan.08G071000.01), UPSTREAM(|2257||None|Vigan.08G071100.01)Vigna nepalensis