Variant information

Chr05:8919369 - 8923023

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8920086TC482149.771.00DOWNSTREAM(|2849||None|Vigan.05G112900.01), DOWNSTREAM(|4941||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920089TC482149.771.00DOWNSTREAM(|2852||None|Vigan.05G112900.01), DOWNSTREAM(|4938||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920100CT431762.771.00DOWNSTREAM(|2863||None|Vigan.05G112900.01), DOWNSTREAM(|4927||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920121TC441937.771.00DOWNSTREAM(|2884||None|Vigan.05G112900.01), DOWNSTREAM(|4906||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920153AG442038.771.00DOWNSTREAM(|2916||None|Vigan.05G112900.01), DOWNSTREAM(|4874||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920154AG452038.771.00DOWNSTREAM(|2917||None|Vigan.05G112900.01), DOWNSTREAM(|4873||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920164GC431928.771.00DOWNSTREAM(|2927||None|Vigan.05G112900.01), DOWNSTREAM(|4863||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920215AG572159.771.00DOWNSTREAM(|2978||None|Vigan.05G112900.01), DOWNSTREAM(|4812||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920253AG562102.771.00DOWNSTREAM(|3016||None|Vigan.05G112900.01), DOWNSTREAM(|4774||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920292CT522000.771.00DOWNSTREAM(|3055||None|Vigan.05G112900.01), DOWNSTREAM(|4735||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920337AG502188.771.00DOWNSTREAM(|3100||None|Vigan.05G112900.01), DOWNSTREAM(|4690||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920350GA522302.771.00DOWNSTREAM(|3113||None|Vigan.05G112900.01), DOWNSTREAM(|4677||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920676GA532142.771.00DOWNSTREAM(|3439||None|Vigan.05G112900.01), DOWNSTREAM(|4351||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920977GA552175.771.00DOWNSTREAM(|3740||None|Vigan.05G112900.01), DOWNSTREAM(|4050||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8921272CG632306.770.98DOWNSTREAM(|3755||None|Vigan.05G113100.01), DOWNSTREAM(|4035||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8921334GT521991.771.00DOWNSTREAM(|3693||None|Vigan.05G113100.01), DOWNSTREAM(|4097||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8921448TA481929.771.00DOWNSTREAM(|3579||None|Vigan.05G113100.01), DOWNSTREAM(|4211||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01), SPLICE_SITE_REGION(|||None|Vigan.05G113000.01)Vigna nepalensis
8921532GA652578.771.00DOWNSTREAM(|3495||None|Vigan.05G113100.01), DOWNSTREAM(|4295||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8921708CA682732.771.00DOWNSTREAM(|3319||None|Vigan.05G113100.01), DOWNSTREAM(|4471||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8921948AG562466.771.00DOWNSTREAM(|3079||None|Vigan.05G113100.01), DOWNSTREAM(|4711||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8922006CG592380.771.00DOWNSTREAM(|3021||None|Vigan.05G113100.01), DOWNSTREAM(|4769||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8922043TA532123.771.00DOWNSTREAM(|2984||None|Vigan.05G113100.01), DOWNSTREAM(|4806||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8922195CT511917.771.00DOWNSTREAM(|2832||None|Vigan.05G113100.01), DOWNSTREAM(|4958||None|Vigan.05G112900.01), SYNONYMOUS_CODING(SILENT|gaG/gaA|E164|None|Vigan.05G113000.01)Vigna nepalensis
8922524AT491833.771.00DOWNSTREAM(|2503||None|Vigan.05G113100.01), SYNONYMOUS_CODING(SILENT|tcT/tcA|S86|None|Vigan.05G113000.01)Vigna nepalensis
8922568AG582241.771.00DOWNSTREAM(|2459||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8923009AT421669.771.00DOWNSTREAM(|2018||None|Vigan.05G113100.01), UTR_5_PRIME(|155||None|Vigan.05G113000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
8920124TTTATATATTATAAAT421889.731.00DOWNSTREAM(|2888||None|Vigan.05G112900.01), DOWNSTREAM(|4902||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920723TAT512277.731.00DOWNSTREAM(|3487||None|Vigan.05G112900.01), DOWNSTREAM(|4303||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920727ATGTA522277.731.00DOWNSTREAM(|3491||None|Vigan.05G112900.01), DOWNSTREAM(|4299||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8920937AAGT602582.731.00DOWNSTREAM(|3701||None|Vigan.05G112900.01), DOWNSTREAM(|4089||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8921729CATC642805.731.00DOWNSTREAM(|3297||None|Vigan.05G113100.01), DOWNSTREAM(|4493||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8921950AACA552457.731.00DOWNSTREAM(|3076||None|Vigan.05G113100.01), DOWNSTREAM(|4714||None|Vigan.05G112900.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8922290CAC451174.731.00DOWNSTREAM(|2736||None|Vigan.05G113100.01), INTRON(|||None|Vigan.05G113000.01)Vigna nepalensis
8922891CCAGAGAGAGAGAG341883.731.00DOWNSTREAM(|2135||None|Vigan.05G113100.01), UTR_5_PRIME(|38||None|Vigan.05G113000.01)Vigna nepalensis