VIGGS:Variant information

Chr04:37661125 - 37662994

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
37661192	C	A	56	2066.77	1.00	UPSTREAM(\|4372\|\|None\|Vigan.04G258200.01), UTR_5_PRIME(\|68\|\|None\|Vigan.04G258300.01)	Vigna nepalensis
37661721	G	A	63	2482.77	1.00	INTRON(\|\|\|None\|Vigan.04G258300.01), UPSTREAM(\|4901\|\|None\|Vigan.04G258200.01)	Vigna nepalensis
37661740	T	A	58	2333.77	1.00	INTRON(\|\|\|None\|Vigan.04G258300.01), UPSTREAM(\|4920\|\|None\|Vigan.04G258200.01)	Vigna nepalensis
37661846	C	T	78	185.77	0.14	INTRON(\|\|\|None\|Vigan.04G258300.01)	Vigna nepalensis
37661914	A	G	78	155.77	0.14	INTRON(\|\|\|None\|Vigan.04G258300.01)	Vigna nepalensis
37662423	G	T	87	1931.77	0.55	DOWNSTREAM(\|4773\|\|None\|Vigan.04G258400.01), INTRON(\|\|\|None\|Vigan.04G258300.01)	Vigna nepalensis
37662547	C	A	82	167.77	0.17	DOWNSTREAM(\|4649\|\|None\|Vigan.04G258400.01), INTRON(\|\|\|None\|Vigan.04G258300.01)	Vigna nepalensis
37662645	T	C	65	1831.77	0.86	DOWNSTREAM(\|4551\|\|None\|Vigan.04G258400.01), SYNONYMOUS_CODING(SILENT\|Tta/Cta\|L220\|None\|Vigan.04G258300.01)	Vigna nepalensis
37662737	G	T	48	1800.77	1.00	DOWNSTREAM(\|4459\|\|None\|Vigan.04G258400.01), SYNONYMOUS_CODING(SILENT\|acG/acT\|T250\|None\|Vigan.04G258300.01)	Vigna nepalensis

Position	Ref.	Alt.	Depth	Score	Freq. Of Alt.	Effect	Species
37661308	C	CCATCTT	44	2036.73	1.00	CODON_INSERTION(\|cca/cCATCTTca\|P17PSS\|None\|Vigan.04G258300.01), UPSTREAM(\|4489\|\|None\|Vigan.04G258200.01)	Vigna nepalensis
37662413	TGTTAGAA	T	91	1910.73	0.54	DOWNSTREAM(\|4782\|\|None\|Vigan.04G258400.01), INTRON(\|\|\|None\|Vigan.04G258300.01)	Vigna nepalensis