Variant information

Chr03:42522713 - 42526631

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 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
42523168TC652530.771.00DOWNSTREAM(|2248||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4990||None|Vigan.03G287300.01)Vigna nepalensis
42523193GC622466.771.00DOWNSTREAM(|2273||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4965||None|Vigan.03G287300.01)Vigna nepalensis
42523239GA642552.771.00DOWNSTREAM(|2319||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4919||None|Vigan.03G287300.01)Vigna nepalensis
42523253TC652827.771.00DOWNSTREAM(|2333||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4905||None|Vigan.03G287300.01)Vigna nepalensis
42523348TC592346.771.00DOWNSTREAM(|2428||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4810||None|Vigan.03G287300.01)Vigna nepalensis
42523496TC672631.771.00DOWNSTREAM(|2576||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4662||None|Vigan.03G287300.01)Vigna nepalensis
42523619AG532134.771.00DOWNSTREAM(|2699||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4539||None|Vigan.03G287300.01)Vigna nepalensis
42523991AG552094.771.00DOWNSTREAM(|3071||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4167||None|Vigan.03G287300.01)Vigna nepalensis
42524363AG471837.771.00DOWNSTREAM(|3443||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|3795||None|Vigan.03G287300.01)Vigna nepalensis
42524515AT401585.771.00DOWNSTREAM(|3595||None|Vigan.03G287100.01), SYNONYMOUS_CODING(SILENT|tcA/tcT|S230|None|Vigan.03G287200.01), UPSTREAM(|3643||None|Vigan.03G287300.01)Vigna nepalensis
42524840GT552226.771.00DOWNSTREAM(|3920||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|3318||None|Vigan.03G287300.01)Vigna nepalensis
42524921AT642523.771.00DOWNSTREAM(|4001||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|3237||None|Vigan.03G287300.01)Vigna nepalensis
42525052TA572367.771.00DOWNSTREAM(|4132||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|3106||None|Vigan.03G287300.01)Vigna nepalensis
42525070TA562313.771.00DOWNSTREAM(|4150||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|3088||None|Vigan.03G287300.01)Vigna nepalensis
42525092TC582300.771.00DOWNSTREAM(|4172||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|3066||None|Vigan.03G287300.01)Vigna nepalensis
42525106AT532101.771.00DOWNSTREAM(|4186||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|3052||None|Vigan.03G287300.01)Vigna nepalensis
42525200TA441710.771.00DOWNSTREAM(|4280||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|2958||None|Vigan.03G287300.01)Vigna nepalensis
42525681AG683097.771.00DOWNSTREAM(|4761||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|2477||None|Vigan.03G287300.01)Vigna nepalensis
42525685AT713127.771.00DOWNSTREAM(|4765||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|2473||None|Vigan.03G287300.01)Vigna nepalensis
42526315TA341373.771.00SYNONYMOUS_CODING(SILENT|ccT/ccA|P368|None|Vigan.03G287200.01), UPSTREAM(|1843||None|Vigan.03G287300.01)Vigna nepalensis
42526367CG461789.771.00NON_SYNONYMOUS_CODING(MISSENSE|Cat/Gat|H386D|None|Vigan.03G287200.01), UPSTREAM(|1791||None|Vigan.03G287300.01)Vigna nepalensis
42526570GT572361.771.00UPSTREAM(|1588||None|Vigan.03G287300.01), UTR_3_PRIME(|159||None|Vigan.03G287200.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
42523248GTG602818.731.00DOWNSTREAM(|2329||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|4909||None|Vigan.03G287300.01)Vigna nepalensis
42524388GATG481902.731.00DOWNSTREAM(|3469||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|3769||None|Vigan.03G287300.01)Vigna nepalensis
42525263ATA37969.731.00DOWNSTREAM(|4344||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|2894||None|Vigan.03G287300.01)Vigna nepalensis
42525747GTTTTTG592569.731.00DOWNSTREAM(|4828||None|Vigan.03G287100.01), INTRON(|||None|Vigan.03G287200.01), UPSTREAM(|2410||None|Vigan.03G287300.01)Vigna nepalensis