Variant information

Chr03:26616422 - 26621880

Filter



 [SNPs] [Indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
26616451TC592598.771.00UTR_5_PRIME(|139||None|Vigan.03G178000.01)Vigna nepalensis
26616701AC582299.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26617278GA592163.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26617620TG782977.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26617791GA491911.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gct/Act|A26T|None|Vigan.03G178000.01)Vigna nepalensis
26617937TA522311.771.00SYNONYMOUS_CODING(SILENT|ccT/ccA|P74|None|Vigan.03G178000.01)Vigna nepalensis
26617938GC522311.771.00NON_SYNONYMOUS_CODING(MISSENSE|Gct/Cct|A75P|None|Vigan.03G178000.01)Vigna nepalensis
26618334AG472086.771.00NON_SYNONYMOUS_CODING(MISSENSE|Agt/Ggt|S141G|None|Vigan.03G178000.01)Vigna nepalensis
26618336TC472086.771.00SYNONYMOUS_CODING(SILENT|agT/agC|S141|None|Vigan.03G178000.01)Vigna nepalensis
26618642TC632546.770.98INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26618673CT672705.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26618725AG612434.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26618759TA672615.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26618876TA592415.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619131AC652475.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619204AG522113.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619363CT471870.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619440GA431644.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619768TG321430.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619789GA411905.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619798GA421842.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619868TC511903.771.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620084AC622861.771.00DOWNSTREAM(|4921||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620090AG622802.771.00DOWNSTREAM(|4915||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620108GA602687.771.00DOWNSTREAM(|4897||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620236CT461782.771.00DOWNSTREAM(|4769||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620281AT602442.771.00DOWNSTREAM(|4724||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620346AG472081.771.00DOWNSTREAM(|4659||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620349TC462021.771.00DOWNSTREAM(|4656||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620453TC452031.771.00DOWNSTREAM(|4552||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620458AG462069.771.00DOWNSTREAM(|4547||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620658TC512282.771.00DOWNSTREAM(|4347||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620686GA652435.771.00DOWNSTREAM(|4319||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620757TG662941.771.00DOWNSTREAM(|4248||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620758TA662941.771.00DOWNSTREAM(|4247||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620822CT702927.771.00DOWNSTREAM(|4183||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620924TA572262.771.00DOWNSTREAM(|4081||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620958AG582379.771.00DOWNSTREAM(|4047||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26621162AG803292.771.00DOWNSTREAM(|3843||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26621335TC542071.771.00DOWNSTREAM(|3670||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26621855TC662634.771.00DOWNSTREAM(|3150||None|Vigan.03G178100.01), UTR_3_PRIME(|400||None|Vigan.03G178000.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
26616433ATA572409.731.00UTR_5_PRIME(|156||None|Vigan.03G178000.01)Vigna nepalensis
26616483AAACACGA441938.731.00UTR_5_PRIME(|101||None|Vigan.03G178000.01)Vigna nepalensis
26616810GTG501354.731.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26618274ACTA461988.731.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619349GGA481421.731.00INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619646TTCCCGCAAGTGCAAAGGAGGTTGTGAGCCAACACAGATCCAGTTGGGGGAAGGGGGTGC12422.250.92INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26619698AATGTAAGATCGTACGAGTCAACGATATTTTTCCCCTTCCTCGACCTTGCATCGCTTGGAAGTTATGATTTTGTTGGATCAGCTTGCATCGCTGTTTAAAATCG91021.730.89INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620036TTA541552.731.00DOWNSTREAM(|4968||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26620651CTC492159.731.00DOWNSTREAM(|4353||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis
26621299AAT571992.731.00DOWNSTREAM(|3705||None|Vigan.03G178100.01), INTRON(|||None|Vigan.03G178000.01)Vigna nepalensis