Variant information

Chr02:18419378 - 18422230

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 [SNPs] [Indels] [SSR-associated indels]

SNPs

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
18420358AG311390.771.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18420422GA361517.771.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18420452GC451740.771.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18421035CA552236.771.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18421827GT622496.771.00UTR_3_PRIME(|177||None|Vigan.02G177700.01)Vigna nepalensis
18422195TG28552.770.93UTR_3_PRIME(|545||None|Vigan.02G177700.01)Vigna nepalensis

Indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
18419635CCCACCAA452062.731.00UTR_5_PRIME(|22||None|Vigan.02G177700.01)Vigna nepalensis
18420166TGAATTATACTTTGT411808.731.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18420347ATA461831.731.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18420525ATA32864.731.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18420563GAG321372.731.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18420576TTA311552.731.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis
18421534AAACC502182.731.00CODON_CHANGE_PLUS_CODON_INSERTION(|atg/aACCtg|M248NL|None|Vigan.02G177700.01)Vigna nepalensis

SSR-associated indels

PositionRef.Alt.DepthScoreFreq. Of Alt.EffectSpecies
18420577(TA)10(TA)17311552.731.00INTRON(|||None|Vigan.02G177700.01)Vigna nepalensis