GBrowse Details

Vigan.11G248200.01

Basic Information:
Name: Vigan.11G248200.01
Multiple alignment
Variant Information
Position: Chr11:37087937..37090040 (- strand)
Length: 2104
Functional Information:
Description: Similar to uncharacterized protein. [C6T072, Glycine max]
GO: Molecular Function: oxidoreductase activity (GO:0016491)
InterPro: Thioredoxin-like fold (IPR012336)
Redoxin (IPR013740)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:32.00,101.55,310.90,308.32,241.66,1594.43,297.38,245.84
Arabidopsis thaliana homolog: AT1G65980.1
Automatic updates:
Name: NM_001248868 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499771 (LOC100499771), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001250734 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306620 (LOC100306620), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:37087937..37088254 (- strand)
Length: 318
Type: three_prime_UTR
Position: Chr11:37088255..37088508 (- strand)
Length: 254
Type: CDS
Position: Chr11:37089160..37089239 (- strand)
Length: 80
Type: CDS
Position: Chr11:37089714..37089868 (- strand)
Length: 155
Type: CDS
Position: Chr11:37089869..37090040 (- strand)
Length: 172
Type: five_prime_UTR

>Vigan.11G248200.01 class=Sequence position=Chr11:37087937..37090040 (- strand)
ACTCCACACA GCCTCCTCCC TTCTAGAATC TTCCATATTG GCAGTTCTTT CGATGTCTGA TTGACTGATA CACAGCACTG
TTTCTTATAT AGGTTGGATC CAGTTTGTGA AGCAAGAATA GCACAACACA AATTCATAGT ACACCATTTC CATCGTAATC
ATCGTCGTGA ATATGGCTCC AATTGCTGTG GGAGATGCTA TTCCAGACGG CATTCTGGCT TATTTGGATG ATGAAAACAA
ACCCCAATCT GTTTCCATTC ACTCTCTTGC CGCTGGCAAG AAAGTCATCA TCTTTGGTGT TCCCGGTGCC TTCACTCCTA
CATGCAGGTC CTCGTTTACC CTTTTCTCTT TATGCTTTCC AATCTTCATA TCTGAATCAT ACAAGTTAAA ATAATCGGAA
AAACCTTCGT GGGTATACCA GATTCACCTT TTTGACCCCC AAAGTTTCAG TATTTTTAAT GAAATGTGAA CTTATGTTTA
TTGATTCAAG ATAATTTACA ACTGGGGTGC TCAAAGTTCT GTTCTTTTTC CTTATCCAGT TTTTGTTTCA AGGTAAAATT
CCCCTTTTGA GTAAAATTTG TCGATGTCGA GTGTTAACAA AGCAAAAAAT AAAAGTGACT CCTAGACAGA AAAATATAAA
ACGTGGGAGT TATACGATGA ATTGGGTGTT GGAGAATGTG TTCCTGGATC CCCAATTTTG GAGGGTGCTT TGCTGTTTCG
ATTATTGCGA GGTTTTTTGG ATCATAAAGT AGAGGTGGTG GTATTTAAAC AGTTTGGTCT TAATCTGTGA CTTTTTAACA
GCTTGAAGCA CGTGCCTGGC TTCATCGAGA GAGCAGAAGA GCTGAAAGGA AAGGGTGTGG ATGAAATCAT CTGTATCAGT
GGTAAGTATA AAGGATGAAC ACATCACTCT TTTTACTACT TTAATGTGCA ATTCAATATC AGTATTAGCA TAAAAATATG
AAATGGGTTG CTGATTGGTT AATTTGAGTC GGAATGGTTA ATTGCTCAAT CAATTGATAC TGATGGTTTA GTGTGTTGTG
GTATGTGTTG ACCTGCGTTT GAAAAATCTT CCTAATTCTT AGTGTTGCAT GGTTTAATCT AAACTTCCAA CAAGTTACTT
GTCTAGAAAG TTGAAATTCA CCAACATTTT TGCACTTCTT GAGCCCAGAA GACTCCTCCA AGGCTCCAAT GTACCAGGTT
TCTTTGTAAA AATGGATTCC TAAATCCAAA TAGCTCGTTG TCTGGTTGTT AATATACTAA CCAACCACTG ATTGTTGATT
TGTTCTTATC ATCTTTAAAA CTGGAAAAGC TTGCATGCAA TGATTTTGAA TTTGAAATTG TTAAACCACA ACTATGATGA
ATAAATGACC TTGGTTATTT ACTCTCCTTA TCTTCTTTTG TTATATAGAT TAAATTGTAG AACACTTTAT GACAGACACT
TGGTGAATAA TGAGTTAAAT CGTGATCATG ATGCAAGTAA CGAAAGTGTT TGTGAAGTGG CTAATTTGAA GTTTGGTTTG
ATTATGTTGC AGTGAATGAC CCCTTTGTGA TGAACTCATG GGCGAAAACT TTCCCAGAGA ACAAGCATGT GAAGTTTCTT
GCAGATGGTG CTGCGAAATA CACCAATGCA CTTGGGCTTG AGCTTGACCT GACAGAGAAG GGGCTTGGTG TTAGGTCTAG
GAGGTTTGCT CTGCTGGTGG AAGACCTGAA GGTGAAGGTT GCCAATGTTG AAAATGCAGG AGAGTTCACT GTCTCCAGTG
CTGAAGATAT CATCAAGGCT CTTTAAACCC TTCAGTTGTG GCTTAGGAAC CTTTGTTCTT TCATGTTCCT GTGACTCTTT
TGATGCCAAA ACTTTTAGTA CAAACATTTT CATAGATGTA ATTGTGTTGT GTGCTTTTAC AAGGGCATGA TGTGGTGCAT
GCTATGGAAA TAAATAAACT TTTTAGCTTC AAGTGTTTTG GGGTGTTGGT GTTTAAAAAC AACTCACATC AGTATCATGT
TTCACTTCTT TCTGCCATTC ATTACTCAGT CTACTATTTG CTGTTTTCTG GTGAAAAAAA CAGTGTAAGT GGGATATGAA
AACAATTAAG AGTGATTCTT CCTA

>Vigan.11G248200.01
ACTCCACACA GCCTCCTCCC TTCTAGAATC TTCCATATTG GCAGTTCTTT CGATGTCTGA TTGACTGATA CACAGCACTG
TTTCTTATAT AGGTTGGATC CAGTTTGTGA AGCAAGAATA GCACAACACA AATTCATAGT ACACCATTTC CATCGTAATC
ATCGTCGTGA ATATGGCTCC AATTGCTGTG GGAGATGCTA TTCCAGACGG CATTCTGGCT TATTTGGATG ATGAAAACAA
ACCCCAATCT GTTTCCATTC ACTCTCTTGC CGCTGGCAAG AAAGTCATCA TCTTTGGTGT TCCCGGTGCC TTCACTCCTA
CATGCAGCTT GAAGCACGTG CCTGGCTTCA TCGAGAGAGC AGAAGAGCTG AAAGGAAAGG GTGTGGATGA AATCATCTGT
ATCAGTGTGA ATGACCCCTT TGTGATGAAC TCATGGGCGA AAACTTTCCC AGAGAACAAG CATGTGAAGT TTCTTGCAGA
TGGTGCTGCG AAATACACCA ATGCACTTGG GCTTGAGCTT GACCTGACAG AGAAGGGGCT TGGTGTTAGG TCTAGGAGGT
TTGCTCTGCT GGTGGAAGAC CTGAAGGTGA AGGTTGCCAA TGTTGAAAAT GCAGGAGAGT TCACTGTCTC CAGTGCTGAA
GATATCATCA AGGCTCTTTA AACCCTTCAG TTGTGGCTTA GGAACCTTTG TTCTTTCATG TTCCTGTGAC TCTTTTGATG
CCAAAACTTT TAGTACAAAC ATTTTCATAG ATGTAATTGT GTTGTGTGCT TTTACAAGGG CATGATGTGG TGCATGCTAT
GGAAATAAAT AAACTTTTTA GCTTCAAGTG TTTTGGGGTG TTGGTGTTTA AAAACAACTC ACATCAGTAT CATGTTTCAC
TTCTTTCTGC CATTCATTAC TCAGTCTACT ATTTGCTGTT TTCTGGTGAA AAAAACAGTG TAAGTGGGAT ATGAAAACAA
TTAAGAGTGA TTCTTCCTA

>Vigan.11G248200.01
ATGGCTCCAA TTGCTGTGGG AGATGCTATT CCAGACGGCA TTCTGGCTTA TTTGGATGAT GAAAACAAAC CCCAATCTGT
TTCCATTCAC TCTCTTGCCG CTGGCAAGAA AGTCATCATC TTTGGTGTTC CCGGTGCCTT CACTCCTACA TGCAGCTTGA
AGCACGTGCC TGGCTTCATC GAGAGAGCAG AAGAGCTGAA AGGAAAGGGT GTGGATGAAA TCATCTGTAT CAGTGTGAAT
GACCCCTTTG TGATGAACTC ATGGGCGAAA ACTTTCCCAG AGAACAAGCA TGTGAAGTTT CTTGCAGATG GTGCTGCGAA
ATACACCAAT GCACTTGGGC TTGAGCTTGA CCTGACAGAG AAGGGGCTTG GTGTTAGGTC TAGGAGGTTT GCTCTGCTGG
TGGAAGACCT GAAGGTGAAG GTTGCCAATG TTGAAAATGC AGGAGAGTTC ACTGTCTCCA GTGCTGAAGA TATCATCAAG
GCTCTTTAA

>Vigan.11G248200.01
MAPIAVGDAI PDGILAYLDD ENKPQSVSIH SLAAGKKVII FGVPGAFTPT CSLKHVPGFI ERAEELKGKG VDEIICISVN
DPFVMNSWAK TFPENKHVKF LADGAAKYTN ALGLELDLTE KGLGVRSRRF ALLVEDLKVK VANVENAGEF TVSSAEDIIK
AL*