GBrowse Details

Vigan.11G237700.01

Basic Information:
Name: Vigan.11G237700.01
Multiple alignment
Variant Information
Position: Chr11:36224125..36226118 (+ strand)
Length: 1994
Functional Information:
Description: Similar to Uncharacterized protein. [I1M2R0, Glycine max]
InterPro: NADH-ubiquinone oxidoreductase, subunit 10 (IPR019377)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:40.17,36.72,37.29,24.49,52.83,64.84,42.07,24.55
Arabidopsis thaliana homolog: AT3G18410.1
Automatic updates:
Name: NM_001249990 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500620 (LOC100500620), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:36224125..36224312 (+ strand)
Length: 188
Type: five_prime_UTR
Position: Chr11:36224313..36224601 (+ strand)
Length: 289
Type: CDS
Position: Chr11:36224824..36224855 (+ strand)
Length: 32
Type: CDS
Position: Chr11:36224856..36226118 (+ strand)
Length: 1263
Type: three_prime_UTR

>Vigan.11G237700.01 class=Sequence position=Chr11:36224125..36226118 (+ strand)
CACAAGGCAT GCTAGCTCTT CAGCACTAAA GTTAGCAAAA TTATATATAT TGGGCCGATA ATAACGGGCC TTTGACTGCA
ATAAGCCCAA TCCGAAGGTA AGTGCAGGTA TAGAATCAGA ATTCGGAAGC ATCCGAGTTG AGCTGAGTTG TGTTGAGTTG
AGACAGGAGA GAGAACTCGT TGGTGAGAAT GGGAAGGAAG AAGGGGTATG TGGAGTTCGA CGAATCGCCG CCGGACGATT
TCGATCCGGC GAATCCGTAC AAGGACCCGG TGGCGATGCT GGAGATGAGG GAGTACATCG TTAGAGAGAA GTGGATTCAA
ATCGAGAAGG CCAAGATCAT CAGAGAGAAG CTACGCTGGT GCTACCGCAT CGAAGGCATC AACCACCTTC AGAAGTGCCG
CCATCTCGTC AACCAGTACC TCGAATCCAC ACGTGGTATC GGTTGGGGCA AGGACGGTCG CCATCCCTCT CTCCATGGTC
AGTCACTTAA TTTCTGAAAC CATTTTTTCA AATTGAATGT TCTAGGGTTT TTATTTTTGG GAATTATTGG GCAATGTGGA
AACTCCGTTA CGTATTTTGT TGTTTTCAAC TACAGAGGTG TGATCCGTTT GGTGATTTTC ATTAACGATG TTTGTAATCG
TGGTTCATTG TCATGATTTT TTTGTGATTC CTTATTCATT GTTTAATTTT ATGATACAGC TCCTAAGGTT GAGCCGGTTG
AGTCTGAATG ACTGTCTTGT GGATAAATAA AAGGTACTTT CAAACATTAT TTCTGTCATT TTTCTTGTTT TATATGAATT
GTTATTGTTA AATGAATCAA TCGTCAAATG AGCTATTCAT CTTTTGGGTT TTGGCTATTT TTGGTTGAAT GGAGATGGTG
TAATGCAAAC CTCATCTTTG CCTAGGATTT ATTTGAATAA ACCTTTCTGG AAGCACGTTA GCTAAAGAAA ACTAGAATGA
ACAATGAGTA AGCTCTTTCG TAAATTAAAC TTAGCTTGTG CGTAAATTGT TTTTTAACTC ATCCAGTAGC TGATTTAGTT
TACGAGGGAA TTTATTTCCT TTTTGTTTCT TATTTTCTTT TCAATTTTAA TTCATTTTTA GTTAGACCTC TTGAGTGATT
TATGTTCATG GTTTCTATTG GTTTTATATT GGCTTTTGAT GGCCTAATGC AACCATGAAT TTGGAACGAC AATGAGATCA
TTGGTGGAGT TAGTTCTTAA GTGAATCCCA CCGGAAAAAA AATGGACTTA CAAGTGAAAT AAGTACTTGG TGACTAGTGA
AACAAGTGAA GTATTTATAT TTCTGCTGAC TCTTCATGCT TATCATGTCT AACGAATTTG AGCTCCATGT CAAAAGTTAG
GATATCCGAC AAGTTGTTGT TGAGCATTCT GAACTTTGCT GAGGGTAATA AATCAGCATT AACTCTTTTG ACGATAGATA
CTAGGGCCTA AATTAAGTGA CATTTGACAG CTTTTCAGAG AAGAATTGCT GTCAACATTG ATGTTGTCAC CATGAACTTC
TTGGTAGAGA TCCCTCTCAT TTCTGGTTAT AATGACGCCG ATGTAGATGA CTGGCGACAC AGTAATAAAG CGAATTTCTC
TAATAAATTC AAGAAAGTGA TGAGTGCTTA AATCGAGTTG TTGAAATGGT TAAAAGTTCT ATTTGCATGA GATATAGCTG
GTCTTCCCTC TCCCCCATCT TACCAACTTT TGTTCCACTA AGTGATGATT GATGGCTCAT TTGCATTGCT ATTAAATTTG
TAAGAACTAA TCATTGGAGT TATTTGATGT ATTTGGTCGG AGGAACATTT GTTTGGTTAA TTTGATAAGT TCAATATCTT
TGGGTGAGTT ATTGATAACA TCTGAATCTT AATTCGAAAT GTCACGTACA CTATTTTTGT TGTAATATTT CTTTATTTTA
AAATAGTTTT CATTGATGCA ATCATTTTGT CTATCAATGA AAGTAAGTTT TGTTTCTCTT ACAGGGAAAG ATTG

>Vigan.11G237700.01
CACAAGGCAT GCTAGCTCTT CAGCACTAAA GTTAGCAAAA TTATATATAT TGGGCCGATA ATAACGGGCC TTTGACTGCA
ATAAGCCCAA TCCGAAGGTA AGTGCAGGTA TAGAATCAGA ATTCGGAAGC ATCCGAGTTG AGCTGAGTTG TGTTGAGTTG
AGACAGGAGA GAGAACTCGT TGGTGAGAAT GGGAAGGAAG AAGGGGTATG TGGAGTTCGA CGAATCGCCG CCGGACGATT
TCGATCCGGC GAATCCGTAC AAGGACCCGG TGGCGATGCT GGAGATGAGG GAGTACATCG TTAGAGAGAA GTGGATTCAA
ATCGAGAAGG CCAAGATCAT CAGAGAGAAG CTACGCTGGT GCTACCGCAT CGAAGGCATC AACCACCTTC AGAAGTGCCG
CCATCTCGTC AACCAGTACC TCGAATCCAC ACGTGGTATC GGTTGGGGCA AGGACGGTCG CCATCCCTCT CTCCATGCTC
CTAAGGTTGA GCCGGTTGAG TCTGAATGAC TGTCTTGTGG ATAAATAAAA GGTACTTTCA AACATTATTT CTGTCATTTT
TCTTGTTTTA TATGAATTGT TATTGTTAAA TGAATCAATC GTCAAATGAG CTATTCATCT TTTGGGTTTT GGCTATTTTT
GGTTGAATGG AGATGGTGTA ATGCAAACCT CATCTTTGCC TAGGATTTAT TTGAATAAAC CTTTCTGGAA GCACGTTAGC
TAAAGAAAAC TAGAATGAAC AATGAGTAAG CTCTTTCGTA AATTAAACTT AGCTTGTGCG TAAATTGTTT TTTAACTCAT
CCAGTAGCTG ATTTAGTTTA CGAGGGAATT TATTTCCTTT TTGTTTCTTA TTTTCTTTTC AATTTTAATT CATTTTTAGT
TAGACCTCTT GAGTGATTTA TGTTCATGGT TTCTATTGGT TTTATATTGG CTTTTGATGG CCTAATGCAA CCATGAATTT
GGAACGACAA TGAGATCATT GGTGGAGTTA GTTCTTAAGT GAATCCCACC GGAAAAAAAA TGGACTTACA AGTGAAATAA
GTACTTGGTG ACTAGTGAAA CAAGTGAAGT ATTTATATTT CTGCTGACTC TTCATGCTTA TCATGTCTAA CGAATTTGAG
CTCCATGTCA AAAGTTAGGA TATCCGACAA GTTGTTGTTG AGCATTCTGA ACTTTGCTGA GGGTAATAAA TCAGCATTAA
CTCTTTTGAC GATAGATACT AGGGCCTAAA TTAAGTGACA TTTGACAGCT TTTCAGAGAA GAATTGCTGT CAACATTGAT
GTTGTCACCA TGAACTTCTT GGTAGAGATC CCTCTCATTT CTGGTTATAA TGACGCCGAT GTAGATGACT GGCGACACAG
TAATAAAGCG AATTTCTCTA ATAAATTCAA GAAAGTGATG AGTGCTTAAA TCGAGTTGTT GAAATGGTTA AAAGTTCTAT
TTGCATGAGA TATAGCTGGT CTTCCCTCTC CCCCATCTTA CCAACTTTTG TTCCACTAAG TGATGATTGA TGGCTCATTT
GCATTGCTAT TAAATTTGTA AGAACTAATC ATTGGAGTTA TTTGATGTAT TTGGTCGGAG GAACATTTGT TTGGTTAATT
TGATAAGTTC AATATCTTTG GGTGAGTTAT TGATAACATC TGAATCTTAA TTCGAAATGT CACGTACACT ATTTTTGTTG
TAATATTTCT TTATTTTAAA ATAGTTTTCA TTGATGCAAT CATTTTGTCT ATCAATGAAA GTAAGTTTTG TTTCTCTTAC
AGGGAAAGAT TG

>Vigan.11G237700.01
ATGGGAAGGA AGAAGGGGTA TGTGGAGTTC GACGAATCGC CGCCGGACGA TTTCGATCCG GCGAATCCGT ACAAGGACCC
GGTGGCGATG CTGGAGATGA GGGAGTACAT CGTTAGAGAG AAGTGGATTC AAATCGAGAA GGCCAAGATC ATCAGAGAGA
AGCTACGCTG GTGCTACCGC ATCGAAGGCA TCAACCACCT TCAGAAGTGC CGCCATCTCG TCAACCAGTA CCTCGAATCC
ACACGTGGTA TCGGTTGGGG CAAGGACGGT CGCCATCCCT CTCTCCATGC TCCTAAGGTT GAGCCGGTTG AGTCTGAATG
A

>Vigan.11G237700.01
MGRKKGYVEF DESPPDDFDP ANPYKDPVAM LEMREYIVRE KWIQIEKAKI IREKLRWCYR IEGINHLQKC RHLVNQYLES
TRGIGWGKDG RHPSLHAPKV EPVESE*