GBrowse Details

Vigan.11G220900.01

Basic Information:
Name: Vigan.11G220900.01
Multiple alignment
Variant Information
Position: Chr11:34742602..34746068 (- strand)
Length: 3467
Functional Information:
Description: Similar to Annexin. [V7C5L5, Phaseolus vulgaris]
GO: Molecular Function: calcium ion binding (GO:0005509)
Molecular Function: calcium-dependent phospholipid binding (GO:0005544)
InterPro: Annexin (IPR001464)
Annexin, plant (IPR009118)
Annexin repeat, conserved site (IPR018252)
Annexin repeat (IPR018502)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:55.05,20.79,83.13,61.89,39.30,46.59,100.08,44.70
Arabidopsis thaliana homolog: AT1G68090.1
Automatic updates:
Name: NM_001253211 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max annexin D5-like (LOC100820062), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr11:34742602..34742832 (- strand)
Length: 231
Type: three_prime_UTR
Position: Chr11:34742833..34743036 (- strand)
Length: 204
Type: CDS
Position: Chr11:34743865..34743954 (- strand)
Length: 90
Type: CDS
Position: Chr11:34744041..34744256 (- strand)
Length: 216
Type: CDS
Position: Chr11:34744536..34744757 (- strand)
Length: 222
Type: CDS
Position: Chr11:34745215..34745360 (- strand)
Length: 146
Type: CDS
Position: Chr11:34745758..34745833 (- strand)
Length: 76
Type: CDS
Position: Chr11:34745834..34746068 (- strand)
Length: 235
Type: five_prime_UTR

>Vigan.11G220900.01 class=Sequence position=Chr11:34742602..34746068 (- strand)
AAAGGAATGG CTTTTTTTCA GCTCAAGACA AGAAGTGGAG ACAACAAAGT TACTTTAGTA GAAGAAAGTG GTTGGGTAGG
ACATGTTGAA GAAAGATGAA ATTAATGTTT TCTAAATGCG GTGGACGGAG AAGAAGACAT TGAATTGAAT AATTCCACCC
ATCGGTGTTA TCTTCTCATA ACATTTTTCT CTATTTTTCC AACTTCTCTT CTGAGAGTTT CTCACAGGAA TCAAGATGGC
TACTTTGACT GTGCCCCCAG TTCCTCCTTC TCCTAGAGAT GATGCACTGC AACTTTACCG TGCCTTTAAG GGTACCCTTT
TTCTCTTCAA TTTTCAATTC TTCTTATGCT TTTAAACACA CCTTAAAAGT CTCACCTTTA ATTAACTACC TAGTTTTCTG
TTTGAAACTT CCCTTTGGGG AACATGCTAT TTCTGGAAAT TCATGTCATG TCAGTGTGAA TTTTAACATA ATATCCCAGT
ATTAACCTTT TTGCATTTTT GGTTTTAATT TTGAAGTTTG GAAACAAGCC CTGATTGCCA ATGTTGTTGT TTTCTTTTTG
TTTTGCATGT AAATGTACCT TGTGAAGAAG AGTCTTGACT CTTGAACGTT TATTTCTTAT ATTGCTCTGA ACTTTCTCAA
CCCTAATTTG AACATTTTTT TCAATTATTC AGACCTGTGA TTTCTTTCTA ATTGTGCTGT TTTCACAGGA TTGGGTTGTG
ATACCAGTGC TGTTATCAAT CTTCTTGCTC ATCGTGATGC TACACAGCGT GCCTACATCC AACAAGAGTA CAAAACAATG
TATTCTGAGG AACTTTCCAA ACGTTTAGCT TCAGAGCTTA GTGGAAAGTT AGAGGTATAC TAATCATTAA AATACAGTAC
CATGTTCAGA GGAAATTTTC CATAAACTTA TGTAAGAAAC AAAGAGCAAA AATATATTCT TTATGCATAA GTGTCATATA
TGTCAGGAAT GTAAGTGTAG GTCTAAATCA GAGATTAAAT AAATAATAAT ATTGAGCAAA GAAAATTCAT AAATCTATTG
TTTTAAAACT TTAGATTAAA AGTAGTGTTA ATATGTTATG TGAATTTGGC TCATGTCATT GTTGTTATAA ACTGACGAAA
CCAAACAGAA CCGATGAAAG AGCAGAAATG TGTTTTAGAC AAAAATAGAC ATATAGATAG ATTATTCATA TTCTAGAAAC
ATATTTGTAT AGAAAACTAA ATCATGTGTC TTAAAATTTA GAATAGAGGA TGAAATGTTT CCCAACACTT CTGGTTGGTC
TTATACGTTC TTTTTTTTGT CTGTTTATCA GAGTGCAGTT CTGATGTGGT TGAAAGACCC TGCAGGACGT GATGCATCAA
TCATTAGGAA GTCTCTGGTA GAGATCCGAA GCCTTGAAGG TGCTACTGAA GTTATATGTT CACGAACTCC ATCTCAGCTG
CAGTATTTAA AACAGGTCTA CCATTCATTG TTTGGTGTTT ATCTTGAGCA TGATATTCAA GCAAACACCA GCCCCGGGAG
TGATCATCAA AAGGTGAGAT TTCTATTGCT AACATTCATG AAACCAACCC AAGATGTTGT TCTTCAGGAT ATGCCTTGAT
AAACTAATTA ATGCATGAAC ATTTTTTAAG AGAGAAACTG AAAGAAAATA ACGAAATGAG CTTCTTTAGC TAAGATAAGT
TTAGAAATGT TACTGACAGA AAAATTCTCC AAATTAGTTT GCTTTCATGT TTGAATCCAT GAGTTCCTTT CAAGTAATTA
GAAGAGTGGA ACTGCTGCTA TTGATACCTT TTATGTATGA AACTTGCTTC AGTTGTTGCT TGCATATATA AGCACACCTC
GTCCTGAAGG CCCTGAAGTT AACAGAGAAA TTGCTCAGAA GGATGCAAAA GTTCTTTACA AAGCAGGGGA GAAGAAACTA
GGAACTGATG AAAAGTCCTT TATCCACATA TTCAGTGAAC GGAGTGCTGC ACATTTGGCT GCTGTCAGTG CTTATTACCA
TGACATGTAT GGTCATTCTC TGAAGAAGGT ATCTTCAGCA TTTTTAATTT CTTTAATTGA ATTTACTCTT TCTTCTGATA
TTTTTACTGT GTTTGTTCAA TCTGAATTTA TCAGGCAATA AAGAATGAAA CATCTGGACT GTTTGAACTT GCACTTTTGA
CAATTGTCCA ATGTGCCATT CATCCTGGAA AGTACTTTGC TAAGGTATTC AACTTTTGAT GAGTGCTTCT TGCAATGCAA
TTTCAACAAC TTTTTGTTCA ATGACTAACT GTAGACACTT ATGCTAGGCT TATTGAAAGA ATTATTTTGA CAATGATGTT
GAACATGTAT TTCACTGTTT AAAATAAATT GTGCTTGTGT TACATGGAAG GAAATTATTT TGAAAGGTTT AGGACCTGTA
CCTGTTTGAT TTCCTTCTTA CTTTTTGATT AAAAGCCTTT TACAGAACAA TTTCATAATA CTCAGCAGTT AATTTCCATC
CTTAATCTGT CAACTTTTGA AAAGTGTTTC CAAAGCAAAT GTCTTAAACC ATTAAATAGA AACAACTCAA TAGTTGCATT
TTAAAACCTT GTTTAAAAAC CTTGAATTTA AAAACCACCC TACACAGTTG TGTAAACAAC CTTGTTTGGT TGCATTTTAA
AAACTCAGCA TTTTTAGAAA AAAGAAACCG AGAACGCCTT TTGACATTCC AGAGCAAGTT TGTCAAACAT ATTTTCTCCA
GGGCATTTAG AATAAGCAGA TTGTATTGGC TAAGTCATTT GGATTCTTGT AACTTTTTGT TGGAAATCTG ATATCGACTA
TAGGGATAAA GTCAATTCAT AATATATAAG TGAATGTAAA TTTCATATTG CAAACCAGTT TTGTAAGATT GAGATAATAT
TGAAGTTTAC TTCTAAACAT GATATCAGAG TCGTGGGTTA AAGCTATCTA TATTCATCAT GATGCCTTTT GATTTGCCAA
AGCCAACATT AATGGAATTG ATTCTTCAAA TATGAATGAG GGAAGCTTTT AAAATATGTG ACCACCATGC AGGTTTTGCA
CAAGGCAATG AAAGGTTTGG GGACTGATGA TTCCACACTG ATAAGAGTGA TTGTGACAAG GACAGAGGTT GACATGCAGT
ATATCAAAGC AGAATATTCA AAGAAACACA AGAAGACTCT GAATGATGCA GTTCACTCAG AAACATCTGG TCACTACAGA
GCTTTTCTTC TCTCACTTTT AGGCCCTAAT ATCTAGCCAA CAAGATGTTC AATGTGGGAT AAACTCACCC CTCTGATGGT
TTAAGATTGG TTTGTTGCAG TTTGTGATCC ATGTAGTGTA ACCGATCTCT TGTAAAATAA GGTTGTTGTT ATTGTTTTGT
ACACTTGTAC TAATGCTTTG AGAGTATTAG TTTCAGCGTA ATGCATTGAT GAAGAACTTT TGTGTATTAA ATATATATGT
TTTTTTCTTG TTTTAACAGT CAAATTG

>Vigan.11G220900.01
AAAGGAATGG CTTTTTTTCA GCTCAAGACA AGAAGTGGAG ACAACAAAGT TACTTTAGTA GAAGAAAGTG GTTGGGTAGG
ACATGTTGAA GAAAGATGAA ATTAATGTTT TCTAAATGCG GTGGACGGAG AAGAAGACAT TGAATTGAAT AATTCCACCC
ATCGGTGTTA TCTTCTCATA ACATTTTTCT CTATTTTTCC AACTTCTCTT CTGAGAGTTT CTCACAGGAA TCAAGATGGC
TACTTTGACT GTGCCCCCAG TTCCTCCTTC TCCTAGAGAT GATGCACTGC AACTTTACCG TGCCTTTAAG GGATTGGGTT
GTGATACCAG TGCTGTTATC AATCTTCTTG CTCATCGTGA TGCTACACAG CGTGCCTACA TCCAACAAGA GTACAAAACA
ATGTATTCTG AGGAACTTTC CAAACGTTTA GCTTCAGAGC TTAGTGGAAA GTTAGAGAGT GCAGTTCTGA TGTGGTTGAA
AGACCCTGCA GGACGTGATG CATCAATCAT TAGGAAGTCT CTGGTAGAGA TCCGAAGCCT TGAAGGTGCT ACTGAAGTTA
TATGTTCACG AACTCCATCT CAGCTGCAGT ATTTAAAACA GGTCTACCAT TCATTGTTTG GTGTTTATCT TGAGCATGAT
ATTCAAGCAA ACACCAGCCC CGGGAGTGAT CATCAAAAGT TGTTGCTTGC ATATATAAGC ACACCTCGTC CTGAAGGCCC
TGAAGTTAAC AGAGAAATTG CTCAGAAGGA TGCAAAAGTT CTTTACAAAG CAGGGGAGAA GAAACTAGGA ACTGATGAAA
AGTCCTTTAT CCACATATTC AGTGAACGGA GTGCTGCACA TTTGGCTGCT GTCAGTGCTT ATTACCATGA CATGTATGGT
CATTCTCTGA AGAAGGCAAT AAAGAATGAA ACATCTGGAC TGTTTGAACT TGCACTTTTG ACAATTGTCC AATGTGCCAT
TCATCCTGGA AAGTACTTTG CTAAGGTTTT GCACAAGGCA ATGAAAGGTT TGGGGACTGA TGATTCCACA CTGATAAGAG
TGATTGTGAC AAGGACAGAG GTTGACATGC AGTATATCAA AGCAGAATAT TCAAAGAAAC ACAAGAAGAC TCTGAATGAT
GCAGTTCACT CAGAAACATC TGGTCACTAC AGAGCTTTTC TTCTCTCACT TTTAGGCCCT AATATCTAGC CAACAAGATG
TTCAATGTGG GATAAACTCA CCCCTCTGAT GGTTTAAGAT TGGTTTGTTG CAGTTTGTGA TCCATGTAGT GTAACCGATC
TCTTGTAAAA TAAGGTTGTT GTTATTGTTT TGTACACTTG TACTAATGCT TTGAGAGTAT TAGTTTCAGC GTAATGCATT
GATGAAGAAC TTTTGTGTAT TAAATATATA TGTTTTTTTC TTGTTTTAAC AGTCAAATTG 

>Vigan.11G220900.01
ATGGCTACTT TGACTGTGCC CCCAGTTCCT CCTTCTCCTA GAGATGATGC ACTGCAACTT TACCGTGCCT TTAAGGGATT
GGGTTGTGAT ACCAGTGCTG TTATCAATCT TCTTGCTCAT CGTGATGCTA CACAGCGTGC CTACATCCAA CAAGAGTACA
AAACAATGTA TTCTGAGGAA CTTTCCAAAC GTTTAGCTTC AGAGCTTAGT GGAAAGTTAG AGAGTGCAGT TCTGATGTGG
TTGAAAGACC CTGCAGGACG TGATGCATCA ATCATTAGGA AGTCTCTGGT AGAGATCCGA AGCCTTGAAG GTGCTACTGA
AGTTATATGT TCACGAACTC CATCTCAGCT GCAGTATTTA AAACAGGTCT ACCATTCATT GTTTGGTGTT TATCTTGAGC
ATGATATTCA AGCAAACACC AGCCCCGGGA GTGATCATCA AAAGTTGTTG CTTGCATATA TAAGCACACC TCGTCCTGAA
GGCCCTGAAG TTAACAGAGA AATTGCTCAG AAGGATGCAA AAGTTCTTTA CAAAGCAGGG GAGAAGAAAC TAGGAACTGA
TGAAAAGTCC TTTATCCACA TATTCAGTGA ACGGAGTGCT GCACATTTGG CTGCTGTCAG TGCTTATTAC CATGACATGT
ATGGTCATTC TCTGAAGAAG GCAATAAAGA ATGAAACATC TGGACTGTTT GAACTTGCAC TTTTGACAAT TGTCCAATGT
GCCATTCATC CTGGAAAGTA CTTTGCTAAG GTTTTGCACA AGGCAATGAA AGGTTTGGGG ACTGATGATT CCACACTGAT
AAGAGTGATT GTGACAAGGA CAGAGGTTGA CATGCAGTAT ATCAAAGCAG AATATTCAAA GAAACACAAG AAGACTCTGA
ATGATGCAGT TCACTCAGAA ACATCTGGTC ACTACAGAGC TTTTCTTCTC TCACTTTTAG GCCCTAATAT CTAG

>Vigan.11G220900.01
MATLTVPPVP PSPRDDALQL YRAFKGLGCD TSAVINLLAH RDATQRAYIQ QEYKTMYSEE LSKRLASELS GKLESAVLMW
LKDPAGRDAS IIRKSLVEIR SLEGATEVIC SRTPSQLQYL KQVYHSLFGV YLEHDIQANT SPGSDHQKLL LAYISTPRPE
GPEVNREIAQ KDAKVLYKAG EKKLGTDEKS FIHIFSERSA AHLAAVSAYY HDMYGHSLKK AIKNETSGLF ELALLTIVQC
AIHPGKYFAK VLHKAMKGLG TDDSTLIRVI VTRTEVDMQY IKAEYSKKHK KTLNDAVHSE TSGHYRAFLL SLLGPNI*