GBrowse Details

Vigan.11G062400.01

Basic Information:
Name: Vigan.11G062400.01
Multiple alignment
Variant Information
Position: Chr11:7139916..7142939 (- strand)
Length: 3024
Functional Information:
Description: Similar to Uncharacterized protein. [I1LWV7, Glycine max]
GO: Biological Process: cellulose biosynthetic process (GO:0030244)
Molecular Function: intramolecular transferase activity (GO:0016866)
InterPro: Reversibly glycosylated polypeptide family (IPR004901)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.31,0.30,26.25,2.79,2.55,22.50,7.40,4.21
Arabidopsis thaliana homolog: AT3G02230.1, AT3G08900.1, AT5G15650.1, AT5G50750.1
Structure :
Position: Chr11:7139916..7140267 (- strand)
Length: 352
Type: three_prime_UTR
Position: Chr11:7140268..7140597 (- strand)
Length: 330
Type: CDS
Position: Chr11:7140978..7141146 (- strand)
Length: 169
Type: CDS
Position: Chr11:7141265..7141515 (- strand)
Length: 251
Type: CDS
Position: Chr11:7142292..7142621 (- strand)
Length: 330
Type: CDS
Position: Chr11:7142622..7142939 (- strand)
Length: 318
Type: five_prime_UTR

>Vigan.11G062400.01 class=Sequence position=Chr11:7139916..7142939 (- strand)
TTTTGTTCGA CGGTGCAACA CTGATGTTGG CATTTCTCTC TGTCTCTCTC ATCCACAAAA GTTACCACAT CTTGCGGGCA
TTAGCTCTTG AAGAAGTCAT TGTTACCTTA AACATTCAGA GACATGAACC TTTAATGTAT ACACCCCATA CTAGTGCCGA
TAACTTAGGC ATTGCACGTG TTACACCCTT CTCTTTTCCC CTTAATACTC CTACAACCTC CCTCTCTTTC CCTTCAAAAG
CTCACTCTTT TTCTCCCTTC TCTTCACCCT TTCCCTTTCT CTTTCTCCTT CTCTCTGCAA CGTAACCTTC TTCTTGCAAT
GGCAACTGCA ACTTCCTATG TCACATCGCC ACCTCCATTG AAAAATGAGC TTGACATCGT TATCCCCACC ATAAGGAACC
TTGACTTTCT TGAGATGTGG AGGCCATTCT TTGAGCCTTA CCATTTGATC ATTGTGCAGG ATGGTGACCC CACCAAAACC
ATTAAGGTTC CACCTGGTTT TGACTATGAA CTCTACAACC GCAATGACAT CAACAAGCTT CTCGGTCCAA GGGCCTCTTG
CATCTCCTTC AAGGACTCTG CTTGCCGCTG CTTTGGCTAC ATGGTGTCTA AGAAGAAGTA CATCTTCACC ATTGATGATG
ACTGCTTTGT GAGTTTTTCT TTCCTTTCAC CTTTCTGGGT GTCTCGATTT TGTTAATGGA CAAAATCTAC ACGCATGGAT
TTCCAGAGTG ACACAAATTT TGATTAAAGT ACAGAACAAA AAGCATATGA AAAAACCAGA TCAAAGTTCT GCATTTGTTT
GCTCTTTTGT TCGATGTTTG GAGAGATCTT GAAGTGATTT TTTTGAACTG AGTGACCAAT TTCATGCCTC CATGCAACAA
TGATTTTGGT TGCAGATTCC CCTGTGCCCT CTAGATTACG GATTCTGTTA TTCTGCTCTG CATCATTGTT ATTCTCCAAA
TGTTTTCAAT GTGCAACTGG TGCTGTTGCT GTTTTCTTTT TTACTTTTTG GCCATTGCAT GAGTTAGATC CATGTTTTGT
GGTCTGTGAT GATGAACTTC CTCTTCAAGG TGTTTAGATT ATTAGTGAAA TATTATTTTG CTCATCTGTG CTATGAGATT
TGGTAGTTTT AAGCATTGTC TTTGAAAATT GCCTTTCTTC TTACAATTCT ACCTGCTAGG GTGTAATTTT TACTGCAAAA
TATTACATTG GTATATATTC CATAGTGTTA ACTTTGTCCT TTATCTGTTG AACTCACATG TCATTAGTGC CATATCTTCT
GCGGACCTTG GATTTATCAG TTGATTTTAT AATCATTTGT CTATACTTTT ATATGATGAT TAATATCTAA CTTTTTCTGC
TGCTACATTT TTCTGAATTA AATTAAATTA AATTATTCAC TAGTTTATTG TTTTTATGGC CCAGGTTGCC AGTGAACCAT
CTGGAAAAAA GATTAATGCT CTTGAGCAGC ATATTAAAAA CCTTCTGTGT CCATCCACAC CATACTTCTT CAATACCCTT
TATGACCCCT TCAGAGAAGG AGCAGATTAT GTTCGTGGAT ACCCTTTTAG TCTTCGTGAA GGTGCACCAA CTGCAGTTTC
TCATGGTCTT TGGCTCAACA TCCCAGACTA TGATGCTCCT ACACAACTTG TGAAGCCTCT TGAGAGGAAC ACTAGGTATA
TATATAGTAC CATATAACAT AGCAATACCC TTATTTTGAA CCTTCTACCT AACAAAAACT ACAAAGTGTT AGCCTATACA
ATTTTGATTG TGACTCTTGT CATTGTGTAC AAGGTATGTG GATGCTGTTC TGACCATTCC AAAAGGCACT TTATTCCCAA
TGTGTGGAAT GAACTTGGCA TTCGATCGTG ATCTCATTGG ACCTGCGATG TACTTTGGTC TCATGGGAGA CGGTCAACCA
ATTGGACGCT ACGATGATAT GTGGGCTGGT TGGTGCTGCA AGGTCAGTTT CTTTGCTTTA TTCCAGTGTA AAACTTTATA
GGAACAGTTA AATGGATATT TAGAAATGCT TAAATTTGTA CATACAATTG TTTTACCAAA AGTTCCCTTT AGACAGTTAG
TAAAATTAAG CAGTTATTTC TTCTGATAAC ATGATCTAAT CACACACTTA TTGAATCAGT ACTTGTTATG TCAGTACTCA
TCAAAGCAGA ACTAAGGTTA GATTGTTTTC ATTAAGTTAT TCTGCAAAGT TTCCTTAAAC ACGTACATAA ATTTGTGTTA
TAGATAAGTT CGGTAAATAG ATTCCTTACA TGCATACCCT TATAAGCTAT ATGAATATTA TAGCAAAAAA ACAAATGAGA
TACTTTGATG ATGGTGATTC AGGTGATCTG TGATCATCTG GGGCTAGGAA TCAAGACTGG TCTTCCATAC ATCTATCACA
GCAAGGCAAG CAACCCATTT GTTAACCTGA GGAAAGAGTA CAAAGGCATA TTCTGGCAGG AGGACATTAT TCCATTCTTC
CAGAATGTTG TGCTTCCAAA AGAATGCACC ACAGTGCAGA AGTGCTACAT TGAGCTCTCC AAGCAAGTCA AGGAAAAGCT
TTCAAAGATT GATCCTTACT TTGACAAGCT GGCAGATGCC ATGGTTACTT GGATTGAGGC TTGGGATGAT CTTAACCCTG
TTGGAGCATC TAAGGCCAAT GGCAAAGCAT AAACAGGTCT TGGTTAGCAA CCACTGAAAC TGGACTAGAA GTCGAACTAT
TTTTATTCTG TACTTTTTTT AAGTATTTCT TTTCGATTTA CAATTAGTGT CACTTAAGTT TGCAGCATTG TTAGCTGTAA
TTCTATTTTT TTCACTTCAT GCTTTGAGAT TATGAAGAAT AAAGTACAAT GGTCTAGTTG TTTTCTTGTG ATTTTTGTAC
CCTTAGTAGA CACACATCAC TCAGGACCTT ATCACTTGCT GGTTCTGAAG TTCAAGTGAA GCAAGTGTTA TTATAGGAAG
AATATCAATG TATGGCTCAT TACCAAATCA ACAGTGATCG AGTTTTCAAA CTGATATGTT CAGG

>Vigan.11G062400.01
TTTTGTTCGA CGGTGCAACA CTGATGTTGG CATTTCTCTC TGTCTCTCTC ATCCACAAAA GTTACCACAT CTTGCGGGCA
TTAGCTCTTG AAGAAGTCAT TGTTACCTTA AACATTCAGA GACATGAACC TTTAATGTAT ACACCCCATA CTAGTGCCGA
TAACTTAGGC ATTGCACGTG TTACACCCTT CTCTTTTCCC CTTAATACTC CTACAACCTC CCTCTCTTTC CCTTCAAAAG
CTCACTCTTT TTCTCCCTTC TCTTCACCCT TTCCCTTTCT CTTTCTCCTT CTCTCTGCAA CGTAACCTTC TTCTTGCAAT
GGCAACTGCA ACTTCCTATG TCACATCGCC ACCTCCATTG AAAAATGAGC TTGACATCGT TATCCCCACC ATAAGGAACC
TTGACTTTCT TGAGATGTGG AGGCCATTCT TTGAGCCTTA CCATTTGATC ATTGTGCAGG ATGGTGACCC CACCAAAACC
ATTAAGGTTC CACCTGGTTT TGACTATGAA CTCTACAACC GCAATGACAT CAACAAGCTT CTCGGTCCAA GGGCCTCTTG
CATCTCCTTC AAGGACTCTG CTTGCCGCTG CTTTGGCTAC ATGGTGTCTA AGAAGAAGTA CATCTTCACC ATTGATGATG
ACTGCTTTGT TGCCAGTGAA CCATCTGGAA AAAAGATTAA TGCTCTTGAG CAGCATATTA AAAACCTTCT GTGTCCATCC
ACACCATACT TCTTCAATAC CCTTTATGAC CCCTTCAGAG AAGGAGCAGA TTATGTTCGT GGATACCCTT TTAGTCTTCG
TGAAGGTGCA CCAACTGCAG TTTCTCATGG TCTTTGGCTC AACATCCCAG ACTATGATGC TCCTACACAA CTTGTGAAGC
CTCTTGAGAG GAACACTAGG TATGTGGATG CTGTTCTGAC CATTCCAAAA GGCACTTTAT TCCCAATGTG TGGAATGAAC
TTGGCATTCG ATCGTGATCT CATTGGACCT GCGATGTACT TTGGTCTCAT GGGAGACGGT CAACCAATTG GACGCTACGA
TGATATGTGG GCTGGTTGGT GCTGCAAGGT GATCTGTGAT CATCTGGGGC TAGGAATCAA GACTGGTCTT CCATACATCT
ATCACAGCAA GGCAAGCAAC CCATTTGTTA ACCTGAGGAA AGAGTACAAA GGCATATTCT GGCAGGAGGA CATTATTCCA
TTCTTCCAGA ATGTTGTGCT TCCAAAAGAA TGCACCACAG TGCAGAAGTG CTACATTGAG CTCTCCAAGC AAGTCAAGGA
AAAGCTTTCA AAGATTGATC CTTACTTTGA CAAGCTGGCA GATGCCATGG TTACTTGGAT TGAGGCTTGG GATGATCTTA
ACCCTGTTGG AGCATCTAAG GCCAATGGCA AAGCATAAAC AGGTCTTGGT TAGCAACCAC TGAAACTGGA CTAGAAGTCG
AACTATTTTT ATTCTGTACT TTTTTTAAGT ATTTCTTTTC GATTTACAAT TAGTGTCACT TAAGTTTGCA GCATTGTTAG
CTGTAATTCT ATTTTTTTCA CTTCATGCTT TGAGATTATG AAGAATAAAG TACAATGGTC TAGTTGTTTT CTTGTGATTT
TTGTACCCTT AGTAGACACA CATCACTCAG GACCTTATCA CTTGCTGGTT CTGAAGTTCA AGTGAAGCAA GTGTTATTAT
AGGAAGAATA TCAATGTATG GCTCATTACC AAATCAACAG TGATCGAGTT TTCAAACTGA TATGTTCAGG 

>Vigan.11G062400.01
ATGGCAACTG CAACTTCCTA TGTCACATCG CCACCTCCAT TGAAAAATGA GCTTGACATC GTTATCCCCA CCATAAGGAA
CCTTGACTTT CTTGAGATGT GGAGGCCATT CTTTGAGCCT TACCATTTGA TCATTGTGCA GGATGGTGAC CCCACCAAAA
CCATTAAGGT TCCACCTGGT TTTGACTATG AACTCTACAA CCGCAATGAC ATCAACAAGC TTCTCGGTCC AAGGGCCTCT
TGCATCTCCT TCAAGGACTC TGCTTGCCGC TGCTTTGGCT ACATGGTGTC TAAGAAGAAG TACATCTTCA CCATTGATGA
TGACTGCTTT GTTGCCAGTG AACCATCTGG AAAAAAGATT AATGCTCTTG AGCAGCATAT TAAAAACCTT CTGTGTCCAT
CCACACCATA CTTCTTCAAT ACCCTTTATG ACCCCTTCAG AGAAGGAGCA GATTATGTTC GTGGATACCC TTTTAGTCTT
CGTGAAGGTG CACCAACTGC AGTTTCTCAT GGTCTTTGGC TCAACATCCC AGACTATGAT GCTCCTACAC AACTTGTGAA
GCCTCTTGAG AGGAACACTA GGTATGTGGA TGCTGTTCTG ACCATTCCAA AAGGCACTTT ATTCCCAATG TGTGGAATGA
ACTTGGCATT CGATCGTGAT CTCATTGGAC CTGCGATGTA CTTTGGTCTC ATGGGAGACG GTCAACCAAT TGGACGCTAC
GATGATATGT GGGCTGGTTG GTGCTGCAAG GTGATCTGTG ATCATCTGGG GCTAGGAATC AAGACTGGTC TTCCATACAT
CTATCACAGC AAGGCAAGCA ACCCATTTGT TAACCTGAGG AAAGAGTACA AAGGCATATT CTGGCAGGAG GACATTATTC
CATTCTTCCA GAATGTTGTG CTTCCAAAAG AATGCACCAC AGTGCAGAAG TGCTACATTG AGCTCTCCAA GCAAGTCAAG
GAAAAGCTTT CAAAGATTGA TCCTTACTTT GACAAGCTGG CAGATGCCAT GGTTACTTGG ATTGAGGCTT GGGATGATCT
TAACCCTGTT GGAGCATCTA AGGCCAATGG CAAAGCATAA 

>Vigan.11G062400.01
MATATSYVTS PPPLKNELDI VIPTIRNLDF LEMWRPFFEP YHLIIVQDGD PTKTIKVPPG FDYELYNRND INKLLGPRAS
CISFKDSACR CFGYMVSKKK YIFTIDDDCF VASEPSGKKI NALEQHIKNL LCPSTPYFFN TLYDPFREGA DYVRGYPFSL
REGAPTAVSH GLWLNIPDYD APTQLVKPLE RNTRYVDAVL TIPKGTLFPM CGMNLAFDRD LIGPAMYFGL MGDGQPIGRY
DDMWAGWCCK VICDHLGLGI KTGLPYIYHS KASNPFVNLR KEYKGIFWQE DIIPFFQNVV LPKECTTVQK CYIELSKQVK
EKLSKIDPYF DKLADAMVTW IEAWDDLNPV GASKANGKA*