GBrowse Details

Vigan.10G220000.01

Basic Information:
Name: Vigan.10G220000.01
Multiple alignment
Variant Information
Position: Chr10:26749389..26751725 (- strand)
Length: 2337
Functional Information:
Description: Similar to Uncharacterized protein. [I1K6E6, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
Molecular Function: chromatin binding (GO:0003682)
InterPro: SANT/Myb domain (IPR001005)
Homeodomain-like (IPR009057)
Myb domain (IPR017930)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.02,0.34,0.73,0.06,2.96,1.72,14.01
Arabidopsis thaliana homolog: AT1G63910.1
Automatic updates:
Name: NM_001415066 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max myb superfamily protein (LOC128125823), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001415092 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max myb superfamily protein (LOC128125825), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:26749389..26749771 (- strand)
Length: 383
Type: three_prime_UTR
Position: Chr10:26749772..26750483 (- strand)
Length: 712
Type: CDS
Position: Chr10:26751169..26751298 (- strand)
Length: 130
Type: CDS
Position: Chr10:26751461..26751593 (- strand)
Length: 133
Type: CDS
Position: Chr10:26751594..26751725 (- strand)
Length: 132
Type: five_prime_UTR

>Vigan.10G220000.01 class=Sequence position=Chr10:26749389..26751725 (- strand)
AAGAGATTGC ATACAAATTA ATCCCCGCAT TTGATCGAGG CAATAAGAGG CCACTGAGGA AACATTTAAG ACTAAAAGAC
AGGAATAGAA GGAGACTACA TAGGTAGCTA CAAAAGAAGT TAAGAAATTA AGATGGGTCA CCATTCTTGC TGTAACCAAC
AGAAGGTTAA GAGAGGCCTT TGGTCTCCCG AGGAAGACGA GAAGCTCATC AGATACATTA CCACTCACGG CTATGGTTGC
TGGAGTGAAG TTCCAGAGAA AGCTGGTCTC TCCTTTTATC TATTTATCTA TTTTTATATC AAAAATATGT CTTCTTTCCT
TCATCATGTA TGGAATTGCC CTAGCTAGAC TTGCTTTTTT GTGATGAAAT CAACCCTTTT CTTTTATTTA TTTATGATTG
ATGTTCATTC TTTGGCCTGG CTTCCAGGGC TTCAAAGGTG TGGCAAGAGT TGTCGCCTGA GATGGATTAA TTATTTGAGG
CCTGATATTA GAAGAGGAAG GTTTACACCT GAAGAGGAGA AGTTAATTAT AAGTCTTCAC GGGGTTGTTG GCAACAGGTT
TGAACCACAC TTCATTGTAC ACACTATCAA CCATTTTTCA TTATGATCAC TGCATTTTCC GGTTTGCTCT TGCCATTTCT
TTCCAATCAC TACCTTGTAT ACTTGTCTTT CTTCTTTCTA TCAAACACCA ACCCTAAAAT TTTCATATTG ATCAGTATGA
AAGGATATTT CAAGAAAGAA ACTATGGTAA TGGTTCAAAT TAATTGGAAC ACGATCAATC ACAGATAGTA TTATTATGCA
GTTAATTTTC CATAGAACGA GCAATTAGAA ATAGAGTTGA GACCTGTAGC ACTAGTTATG TAACTCATTC ATAGGAATTA
GTCGTAATTA AATCAGCCAT AGTTATTAAC GAATCAATCT GAAGGATCAT GCCCGGAGCT ACAGTTTTGG AGAAGTTAAG
CAGGCAATTT TGTCAGTTGA AATTTACTTG TCTGTTTTCA GTGTGTGTGC ACTCACAGCC TCTCGTGTCG ACATTCATTC
TAATACTACT TTTTCTTGAA GCAACTAAAT TGTTATTTTA TTATCCATTT CTTTCCACGT TTTTCTCAAC ACATTTGCTT
CCAAATTACG ATTCTACGCG AGACATCTTA ACTAAGAAGA TACTGTTTTT AATAATGTAA AAACATTATA TAAACTCGAT
TAATTAACTA TACATGTTCT TTCTTTTGCT TGGGAAATGC AGATGGGCGC ACATTGCAAG CCACTTACCA GGTAGAACTG
ACAATGAAAT AAAGAACTAT TGGAATTCTT GGATCAAAAA GAAAATTAGA AAGCCTTCGG TGACTTCATC AATCACCACT
ACACAGAGTG TGGATCACCA CCCTCAGTTC AATTATAGTT CCAACCAACT AGATCACTTT GGCAACCAAG ACAACGTAAC
AACAAAACCA GCGGTGCAAG AAACCATATT TTCCTCGACG TGCCCTCTAT TTATGTTTGA CACTAGTTCG TTAGACCACG
GGACAACAAC AGTAGACACC ACCAATGTTC GAGCAGAACT GTTCCAAGAT TCATTGGGTT TGAGCAGCGA AACGTGGAAC
TTGAGCCACC ACCAAGTCCA TCATGCTCTT CCTCCTCAAC CAGCACAGGC AGCAGCAACT TTTACAGCAG CTACAGTGAT
GGATAGTACG AATTATCTGC CACCATTGAT AGAGAATGTG GAAAACATGG TGCCAAACAT GGAAGTGCAG GGTTGTAGTA
TAGACGAGGA AGGAGAAATG GCACTGGAGT GTTTGCGGAG ACAAGAGTTG AATGAGTGGG TGGAGAATCA ACAACACTGT
CCCAGTTTTC TTTTCTGGGA CAGCGTTGAA GGACAACTTG GGGGGGAAGA ACTAGCACCA AACACGTCAA ATATTGGAAC
CAATACACTT TCACCTTTTC CTTCATCTTT ATGACTGAGA TCGAGGACTG TCCCCACTGC TCTTTTTCTC ATGCCCCTTC
TAACCAGGAA GAGCTTTCAG AAATGGTCCA GGCCAGCCTG AAACTTATGC AGAGATTGCT TTTCTTCTTT TCATTTTTTT
TTCCAACCTC GCTTTCGATT GTTGATTGGA AAAAGATTGC GAAAAAACGA GTGAAGATAA TATTATTCTA TATATATAAA
TATAGCAAAG AGTGTTTATT GAGTGTTTGA CATGGAAGAG GATACTAATA AAGGCGATTG GCAGCAGCAG GAAAGTTTGA
TTTTGAAGAT ATGGAAAAAT ATTGAATTTG TTATTAATTT GACTGTACAT TTGGTGTTTT TTGAATGAGA ATATACAATA
ATGGATTTGC CTTTTAA

>Vigan.10G220000.01
AAGAGATTGC ATACAAATTA ATCCCCGCAT TTGATCGAGG CAATAAGAGG CCACTGAGGA AACATTTAAG ACTAAAAGAC
AGGAATAGAA GGAGACTACA TAGGTAGCTA CAAAAGAAGT TAAGAAATTA AGATGGGTCA CCATTCTTGC TGTAACCAAC
AGAAGGTTAA GAGAGGCCTT TGGTCTCCCG AGGAAGACGA GAAGCTCATC AGATACATTA CCACTCACGG CTATGGTTGC
TGGAGTGAAG TTCCAGAGAA AGCTGGGCTT CAAAGGTGTG GCAAGAGTTG TCGCCTGAGA TGGATTAATT ATTTGAGGCC
TGATATTAGA AGAGGAAGGT TTACACCTGA AGAGGAGAAG TTAATTATAA GTCTTCACGG GGTTGTTGGC AACAGATGGG
CGCACATTGC AAGCCACTTA CCAGGTAGAA CTGACAATGA AATAAAGAAC TATTGGAATT CTTGGATCAA AAAGAAAATT
AGAAAGCCTT CGGTGACTTC ATCAATCACC ACTACACAGA GTGTGGATCA CCACCCTCAG TTCAATTATA GTTCCAACCA
ACTAGATCAC TTTGGCAACC AAGACAACGT AACAACAAAA CCAGCGGTGC AAGAAACCAT ATTTTCCTCG ACGTGCCCTC
TATTTATGTT TGACACTAGT TCGTTAGACC ACGGGACAAC AACAGTAGAC ACCACCAATG TTCGAGCAGA ACTGTTCCAA
GATTCATTGG GTTTGAGCAG CGAAACGTGG AACTTGAGCC ACCACCAAGT CCATCATGCT CTTCCTCCTC AACCAGCACA
GGCAGCAGCA ACTTTTACAG CAGCTACAGT GATGGATAGT ACGAATTATC TGCCACCATT GATAGAGAAT GTGGAAAACA
TGGTGCCAAA CATGGAAGTG CAGGGTTGTA GTATAGACGA GGAAGGAGAA ATGGCACTGG AGTGTTTGCG GAGACAAGAG
TTGAATGAGT GGGTGGAGAA TCAACAACAC TGTCCCAGTT TTCTTTTCTG GGACAGCGTT GAAGGACAAC TTGGGGGGGA
AGAACTAGCA CCAAACACGT CAAATATTGG AACCAATACA CTTTCACCTT TTCCTTCATC TTTATGACTG AGATCGAGGA
CTGTCCCCAC TGCTCTTTTT CTCATGCCCC TTCTAACCAG GAAGAGCTTT CAGAAATGGT CCAGGCCAGC CTGAAACTTA
TGCAGAGATT GCTTTTCTTC TTTTCATTTT TTTTTCCAAC CTCGCTTTCG ATTGTTGATT GGAAAAAGAT TGCGAAAAAA
CGAGTGAAGA TAATATTATT CTATATATAT AAATATAGCA AAGAGTGTTT ATTGAGTGTT TGACATGGAA GAGGATACTA
ATAAAGGCGA TTGGCAGCAG CAGGAAAGTT TGATTTTGAA GATATGGAAA AATATTGAAT TTGTTATTAA TTTGACTGTA
CATTTGGTGT TTTTTGAATG AGAATATACA ATAATGGATT TGCCTTTTAA 

>Vigan.10G220000.01
ATGGGTCACC ATTCTTGCTG TAACCAACAG AAGGTTAAGA GAGGCCTTTG GTCTCCCGAG GAAGACGAGA AGCTCATCAG
ATACATTACC ACTCACGGCT ATGGTTGCTG GAGTGAAGTT CCAGAGAAAG CTGGGCTTCA AAGGTGTGGC AAGAGTTGTC
GCCTGAGATG GATTAATTAT TTGAGGCCTG ATATTAGAAG AGGAAGGTTT ACACCTGAAG AGGAGAAGTT AATTATAAGT
CTTCACGGGG TTGTTGGCAA CAGATGGGCG CACATTGCAA GCCACTTACC AGGTAGAACT GACAATGAAA TAAAGAACTA
TTGGAATTCT TGGATCAAAA AGAAAATTAG AAAGCCTTCG GTGACTTCAT CAATCACCAC TACACAGAGT GTGGATCACC
ACCCTCAGTT CAATTATAGT TCCAACCAAC TAGATCACTT TGGCAACCAA GACAACGTAA CAACAAAACC AGCGGTGCAA
GAAACCATAT TTTCCTCGAC GTGCCCTCTA TTTATGTTTG ACACTAGTTC GTTAGACCAC GGGACAACAA CAGTAGACAC
CACCAATGTT CGAGCAGAAC TGTTCCAAGA TTCATTGGGT TTGAGCAGCG AAACGTGGAA CTTGAGCCAC CACCAAGTCC
ATCATGCTCT TCCTCCTCAA CCAGCACAGG CAGCAGCAAC TTTTACAGCA GCTACAGTGA TGGATAGTAC GAATTATCTG
CCACCATTGA TAGAGAATGT GGAAAACATG GTGCCAAACA TGGAAGTGCA GGGTTGTAGT ATAGACGAGG AAGGAGAAAT
GGCACTGGAG TGTTTGCGGA GACAAGAGTT GAATGAGTGG GTGGAGAATC AACAACACTG TCCCAGTTTT CTTTTCTGGG
ACAGCGTTGA AGGACAACTT GGGGGGGAAG AACTAGCACC AAACACGTCA AATATTGGAA CCAATACACT TTCACCTTTT
CCTTCATCTT TATGA

>Vigan.10G220000.01
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF TPEEEKLIIS
LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS VTSSITTTQS VDHHPQFNYS SNQLDHFGNQ DNVTTKPAVQ
ETIFSSTCPL FMFDTSSLDH GTTTVDTTNV RAELFQDSLG LSSETWNLSH HQVHHALPPQ PAQAAATFTA ATVMDSTNYL
PPLIENVENM VPNMEVQGCS IDEEGEMALE CLRRQELNEW VENQQHCPSF LFWDSVEGQL GGEELAPNTS NIGTNTLSPF
PSSL*