GBrowse Details

Vigan.10G211700.01

Basic Information:
Name: Vigan.10G211700.01
Multiple alignment
Variant Information
Position: Chr10:26186627..26188925 (- strand)
Length: 2299
Functional Information:
Description: Similar to Transcription factor bHLH14. [XP_007044561.1, Theobroma cacao]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:780.63,479.59,34.30,43.05,55.40,73.83,36.19,48.78
Arabidopsis thaliana homolog: AT1G79390.1
Automatic updates:
Name: NM_001251470 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305897 (LOC100305897), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:26186627..26186833 (- strand)
Length: 207
Type: three_prime_UTR
Position: Chr10:26186834..26187019 (- strand)
Length: 186
Type: CDS
Position: Chr10:26188662..26188838 (- strand)
Length: 177
Type: CDS
Position: Chr10:26188839..26188925 (- strand)
Length: 87
Type: five_prime_UTR

>Vigan.10G211700.01 class=Sequence position=Chr10:26186627..26188925 (- strand)
AATAAATTCA AATAAAAGTA CAACAATTTT GTGTTTTGCA TAGAAAGGTC TGGAGAAGGG GGAAGGGCGG CGAGAGGAAA
GGGCGAGATG GCGTGGAAAT GGATTGTGAG GAGGACCCCC GAATCCAAAT CCTTCTTCCT TGCATTCGCC ACCATATGCG
GCGTCGTTCC GGGCGTCATA GGCTATGGCG TCATGCAACT CACTAACACG CGCAACGAGC AGCTCGAGAC CCATCTTCGC
AGAAGTGCTC GTCCCGAATC ATTGGTAACT CTCTTCTTCG CCCTTCCAAT CCTTTTCTTT TTATTTCTTT ATGCACAAAG
TTTAAACCTT TTTAGGATTA GGATTAGGAT TGTTATCTTT GTTTATTCAC TACTTCAAAT TTAGTATATA CTTTTGCGGC
TGCTGGCTGG TAATTTGTCC GTTATATATT TGTAACTCAT TGAGTGTGGA AAGAAGTAGC GGGAGAGGAA GCAAGGGGAA
AAATAAAATC ACCTGGGTGG GTTATGGCAA ATGAACTGGA AGTTAATCAG TAGTAGGAGT GGAGAGAATG AAGAAGGGCA
TTTTCCCAAG GAAGTGGAAT GAAGGAATTC TATAGGGAAA TAGAGAAGAG GAGAAGCCAC AAATAGTCAT TTGGATCTGT
TTTACATTTT TCTTTATTTC TTCTATTCCT TAGCTGATGG GTTTACCGTG AAGAGAAGCC TAGATATTTT GTATGACATT
AGTATGATTG ATACATCACA CATATAGGGA TACAAGAAAC TCTTAAAAAT TGGAAATATG ATACGGCATA TATGCACAAT
ATTTATGGAG ACACTGATCA TTTCTCTTTA TTCTGTAACT GTAATGCACA ATTATAATTT ATATCAGTGG ATGACAGGGA
TCTCTTACAA AAACAATACT TGTGATGACA ACAAAGGCCG TTGTTACATA TTTGAATTTG TTGTTTTCAT ATTTGTTCAA
AATTACATTC CTTTCCCCGA TACCTTTCAG AGTGTCAAAG AAGCATCATT GGTCCTACTC AGCTAGCTAT TTCCTACTAT
TAGCTATAGC ATAACGATAG AGGGGAAACA TAGATCCATG TGTAATTTTA ATCCTACTCA AAATTTTGGA GCCTCATCTC
AAACATCAGT CAATAAAATT GGACTATTCT CCTTGGATAC ATTTCTAAAA CTATTATAGG TCTATCAGTA TCAGATACAG
GTGCAACTCC AATACTTTAG CCGCCCGGGC TTAATTAATG GGCTACCTCA ATCTCTGTTT TTTATTTCTA GTGCTGTCAG
GTGGTGCTTT CCATCATTCT GCCTTCTTCG ATTTTTAATC CGGGCCTGTA CCCTTCATGT GACCATTATG ATAAATAATT
GGGAAACTTC CTTGTGAACT GTTTGGCTCG GAAACAAGTC TTCAGATCTC ATGGACCATG TCTGCCAAAG TCCGATATAT
ACTTTCTTGA CTTCGTGTTG ACTACTTTTC CTCTCCATAA CAAATTAACT ATACATTAAT CATATATGGA GCCTGCAGGT
GTGAGGCTGT GAACTGTTCA GAACCATAGG GTGAATTGTC AATGTATCTT GGATCCCACA TTTTGCATAA TCTGGGATTC
AACTTTCTAT CCATTTAATT GTGTAGGTTT TTCTTAAAAT GATACATTCT TGTGTGTATT TTCTTCACAC ATTTTTAATT
TCGCCAATTC CTATATTTCA TTTTGATAAT TTTGTCATGA TCATTTTAAA CTTACATATG TAACCAACAA GATTTATCTT
GGATTGGAAT AGAAGTTCCG TTTATCTTAG AAGTTAAATA ACTTGTTAAG TTGAATTAAA TAATCAAGTT CGCACTTGTT
TCATCGAGGT GATTTCCTTT CTTTGGTGAA AATCCTAACG AAGTAGTTTC TTTAATTACG TATCAGATGA TGGGGCAAGT
GAATAAAGAG AGACTGGCAG AGTACCTCGG AGAACTACAG CGGAAGGAGG ATACTAATGA CCGATATACT GCTGCTCTAA
GAGGAGAGAC TTTAACGAGG AAACCTTATG TCAGAATACA ACCAATTCCA GAGCAAACAG ACACCAAGGT TGACAAGGAA
CAGAAGAAAT GAATAAGTTG CAGGTCTACA CTATTGTGAA TATAGATTTT TATAATTCAC TACGAACTTG ATACTGCTTT
GTCTGCGTTT AATCGTGTTT TGTTACTGAA TGTGTTTGCA TAAGCACTGA ACTCCTTTTC AAGTGGGTTT GGTTAGGCGG
ACAAGAGTGA CTAGCCATAC TTTATATTAT TCGATTTAGA CAAATTTTTC AGAGGAGAT

>Vigan.10G211700.01
AATAAATTCA AATAAAAGTA CAACAATTTT GTGTTTTGCA TAGAAAGGTC TGGAGAAGGG GGAAGGGCGG CGAGAGGAAA
GGGCGAGATG GCGTGGAAAT GGATTGTGAG GAGGACCCCC GAATCCAAAT CCTTCTTCCT TGCATTCGCC ACCATATGCG
GCGTCGTTCC GGGCGTCATA GGCTATGGCG TCATGCAACT CACTAACACG CGCAACGAGC AGCTCGAGAC CCATCTTCGC
AGAAGTGCTC GTCCCGAATC ATTGATGATG GGGCAAGTGA ATAAAGAGAG ACTGGCAGAG TACCTCGGAG AACTACAGCG
GAAGGAGGAT ACTAATGACC GATATACTGC TGCTCTAAGA GGAGAGACTT TAACGAGGAA ACCTTATGTC AGAATACAAC
CAATTCCAGA GCAAACAGAC ACCAAGGTTG ACAAGGAACA GAAGAAATGA ATAAGTTGCA GGTCTACACT ATTGTGAATA
TAGATTTTTA TAATTCACTA CGAACTTGAT ACTGCTTTGT CTGCGTTTAA TCGTGTTTTG TTACTGAATG TGTTTGCATA
AGCACTGAAC TCCTTTTCAA GTGGGTTTGG TTAGGCGGAC AAGAGTGACT AGCCATACTT TATATTATTC GATTTAGACA
AATTTTTCAG AGGAGAT

>Vigan.10G211700.01
ATGGCGTGGA AATGGATTGT GAGGAGGACC CCCGAATCCA AATCCTTCTT CCTTGCATTC GCCACCATAT GCGGCGTCGT
TCCGGGCGTC ATAGGCTATG GCGTCATGCA ACTCACTAAC ACGCGCAACG AGCAGCTCGA GACCCATCTT CGCAGAAGTG
CTCGTCCCGA ATCATTGATG ATGGGGCAAG TGAATAAAGA GAGACTGGCA GAGTACCTCG GAGAACTACA GCGGAAGGAG
GATACTAATG ACCGATATAC TGCTGCTCTA AGAGGAGAGA CTTTAACGAG GAAACCTTAT GTCAGAATAC AACCAATTCC
AGAGCAAACA GACACCAAGG TTGACAAGGA ACAGAAGAAA TGA

>Vigan.10G211700.01
MAWKWIVRRT PESKSFFLAF ATICGVVPGV IGYGVMQLTN TRNEQLETHL RRSARPESLM MGQVNKERLA EYLGELQRKE
DTNDRYTAAL RGETLTRKPY VRIQPIPEQT DTKVDKEQKK *