GBrowse Details

Vigan.10G183700.01

Basic Information:
Name: Vigan.10G183700.01
Multiple alignment
Variant Information
Position: Chr10:23814603..23818636 (+ strand)
Length: 4034
Functional Information:
Description: Similar to Uncharacterized protein. [I1J9B4, Glycine max]
GO: Biological Process: transport (GO:0006810)
Cellular Component: membrane (GO:0016020)
Molecular Function: transporter activity (GO:0005215)
InterPro: Natural resistance-associated macrophage like (IPR001046)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:129.37,69.66,17.84,27.04,11.53,39.69,28.49,12.75
Arabidopsis thaliana homolog: AT1G47240.1, AT2G23150.1, AT4G18790.1, AT5G67330.1
Automatic updates:
Name: NM_001357773 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max divalent metal ion transporter NRAMP1a (GMNRAMP1A), mRNA.
PubMed ID: 28868061 NCBI(pubmed)
Status: Known Variant
Name: NM_001357777 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max divalent metal ion transporter NRAMP1b (GMNRAMP1B), mRNA.
PubMed ID: 28868061 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr10:23814603..23814933 (+ strand)
Length: 331
Type: five_prime_UTR
Position: Chr10:23814934..23815442 (+ strand)
Length: 509
Type: CDS
Position: Chr10:23815555..23815691 (+ strand)
Length: 137
Type: CDS
Position: Chr10:23816068..23816720 (+ strand)
Length: 653
Type: CDS
Position: Chr10:23817834..23818055 (+ strand)
Length: 222
Type: CDS
Position: Chr10:23818056..23818636 (+ strand)
Length: 581
Type: three_prime_UTR

>Vigan.10G183700.01 class=Sequence position=Chr10:23814603..23818636 (+ strand)
AAAAAACGAA AAAGAAAGAG GAGGATATCT TCTTAACTTT GGCGCCTGAG ATGTCATGTC ACGATACGTA TTATCACAAG
AAACCTTATT CTATTGGGAA AATAAATAGA CATAGATTAG TGTGGGAGGA AAAATGCGAA AAAAGATAAA CGAGAGCAAC
TGAATTTCCT TTCCGGAAAA CGCAAGGGTT GTTTTCAATT GATTCTTATT TTTATACGAT AAGCACTCAA TCAGCTGTTC
TGGTTCTCGC CGCCGAGACA GTAGCGAGTG ACCACGCTGG CGTAACACCA ACGCCACTCA CTTCTTCGTT CTTTAGTTTC
CTCATTCAGC GATGCCTCCA CAAGACCACC ACCAGCCGCT GTTAGCGGAG GAGCAGGAAG AGACTGCGTA CGATTCCGCG
GACAAGGTCG TGGTGGTCGG AATCGACGAG CAGGACGGTG ACGAGGCGCT GCCGTTCTCA TGGCGGAAGC TGTGGCTGTT
CACGGGGCCG GGGTTTCTGA TGAGCATCGC GTTTCTGGAT CCCGGGAATC TGGAGGGGGA TCTTCAGTCT GGTGCCATTG
CTGGGTACTC CCTCTTGTGG CTCCTCATGT GGGCCACTGC TATGGGCCTC CTTATTCAGC TTCTCTCGGC CCGCCTTGGC
GTCGCCACTG GGAGACACTT AGCTGAACTG TGCAGGGAAG AGTATCCTGC ATGGGCTAGG ATTGTGCTCT GGCTTATGAC
TGAAATCGCT CTTATTGGCT CTGACATTCA GGAGGTTATC GGGAGCGCTA TTGCTATCAA GATTCTCAGT AATGGCGTCG
TTCCCCTTTG GGCTGGGGTC GTAGTTACAG CTTTAGATTG GTAGCTAACA TTTGTCTCCC TTTCTTTCTT AAACCATATT
TAGATATTTT AAATGGAGCA ATTAGTTATT TAATTAGCTT CTCTTTTAAT TGTCTTTATT TTTTTTTTAC AGTTTCATTT
TTCTCTTTCT TGAGAACTAT GGTGTGAGGA AACTGGAGGC GTTTTTCGCT GTTCTGATTG CTGTAATGGC TCTGTCGTTT
GCGTGGATGT TTGGTGAAGC AAAGCCCAAT GGTGTTGATG TTCTTGTTGG TAAGTTTGTT TTGGTTTTTA CTTTCAACTA
TTCACTTTCT CCCAGTACTC ATCCATGTTT TAATTTAGTC TCTATAAAAA ACTGTCTTTT TTAGTTTCTA TACAGTTTTT
TTTAATGGTT TATAAACGTT AGAAAGCTTT TGTAGTGGTT TTACACTGCT TAAAATTCTT TTTTAATGCT GGCGTCGAGG
ACCAAAATTA ACTTTTATGT ACGAGTAGGG ACTAAAGCTT ACAACTTAAA ACGAAGACAT CATATGAACC AAATTTAATG
TTTCGTTTAG TTGATTTGGG CGAGTGGAAT TTTACTGTCT TAGAGTAAAT TCTTAGGTGT GCTCTTCCGA CATATCTGAT
AAACACTTCA ATCTTATATT TGTAGGTATT TTGGTTCCTA AACTTAGCTC CAGAACTATA CAACAAGCTG TTGGAGTTGT
GGGTTGCATT ATTATGCCTC ACAATGTGTT TTTGCATTCT GCGCTTGTTC AATCTAGGCA GGTTGACCCC AGCAAGAAAG
GCCGTGTTCA GGAAGCTCTT AATTACTACT CGATAGAGTC CACCATCGCC CTGGCGGTGT CCTTTGTGAT TAATATATTT
GTTACAACTG TGTTTGCCAA GGGCTTTTAT GGTACTGAAA TAGCAAACAA CATTGGTCTT GTAAACGCAG GTCAGTACCT
TCAGGAGAAG TACGGGGGTG GACTTTTCCC CATCATGTAT ATATGGGGTA TTGGGTTGTT AGCAGCCGGC CAGAGTAGCA
CAATTACTGG TACATATGCG GGACAATTTA TCATGGGGGG TTTTCTGAAT TTAAGGTTGA AAAAGTGGGT GAGGGCATTG
ATTACTCGAA GTTTTGCAAT CATCCCAACA ATGATAGTTG CTCTTATATT CGATACCTCG GAGGAGTCAT TAGATGTTCT
GAACGAATGG CTTAATGTTC TCCAATCAGT TCAAATCCCA TTTGCACTCA TTCCCTTGCT TTGCTTAGTG TCCAAAGAAC
AGATAATGGG CAGTTTCAGA ATTGGCCCTG TCCTTAAGGT ATATATTATC ACTTTCTCTG CATTTTTGTC AGACTTTGCC
CGTTGTCAGT GTATTAATTT GATGGAAGAC TTTGAAATGT CGTATTATTT CATTTGATAT AAAATTGCCA GCTTTATCTT
CCTTTATGGG TAATCAATTA AATGAAACCT AGGAAGAGAT AATTCGGAAA TGTCCCAGGG TAGTCCTTTA TGTCTTGCTT
TTCTGGCAAG AGATAATTCA GAATTGACTT AAGGCATACC TGATTTCTCC TATAATTCAA AATTAGATTT TAAGAAGGAA
AACGGGTAGC TTGATTTTAC TGTCCTGTCT TGAGAGTTGA AAGGAGGTGA GATAGTGGAC TGTCCATTAT CTAGTTTCAC
AAATTATTCA CCCCAGGACC TTGATCTTCT TAACAACTAT TCCAAAGCCA TACATTCTTA TATTCTTATC TGTGTATATT
ATTATATTAT CATCATGAGA TTATGTTTTC ATCGTTTTTT CCAATGTGAC CATGGGCACA TGTTAAGAAG AGAAAAATAG
AAAGTTTTTA TTAAAAGTGT AAAACATTTA CTATATTAAA AACATAAAAG TCATTTGATA CATGTTTTTT TATGTAATTA
TAAGGATTTA GTGCTTCCTG CCCATGGGCT CAAAACTGTA TTTTCAATAT CCTATATCAT GCGTTATTTT GCTGCAGTTG
GAGAGTATGT GAATCAGCAT TGTCTTGAAA CGTCAAGAAA ATGACATATG TAGATTACAT GTGATAAAAT AATGCCCACC
ATTGAGATTT TTGATAATTT CTCTACCTAG GTTAACGAGA ACGACTTATG CTTTCCGGAG TCAGTGGTTT CAAGGATTCC
TTTTTTGTAC CCCTACCCGT CTTTTTTTTT TCCTTTATAA GTTTTTTCTG GGGCGTTGGT TCTGCTTAAT ATTATTTAAT
GTTGGACATG CTAAAACAGT ATTGTTTATA TGATGCTTTG CTTTCTGTCA AGGTGTTCTT CAATTGTAGC TTCTGTGGAC
ATTGGTTGTA TTTAGACCAA CACCCCTTTA CCCGATTTTA TGCTTTGTTC TCTTGAATTA ATTGTGCTAT AGTCATGAAT
CATTATTGTC TTTTGGATGA CATGGATACA GATTATTTCC TGGCTTGTGG CTGCTCTGGT GATAGTGATA AACGGCTATC
TTTTGGTGGA ATTCTTCTCC TCTGAAGTGA ATGGAGCAGT GTTTGCAGCT ATAGTGTTTG TATTAACAGC TGCATATGTT
GCATTCGTAC TTTACCTTAT TTCACGAGCC ATTACCTATA CACCATGGCA ACGTTTAACC GGATCTAAGA CAGTTGCTAC
CGCAGAGAAT TGAGCAGTCG TTCAAGTTTC ACAAGTAATT TTCCTCTATT CTTTAAGGCT CACTCGTGCT TGTTATTTGT
AAAAGAACTT GCAACTGGAT GCACGGGGCA CAGGAACCTT GGTTGTCATA CTTCAACAAA ACAAAACGAG TCGGAGTTTA
TGTATCTGTA ATTCTGTCAG AACTCTATGT ATAAATGCAG CTGTAAGCAT ACCTTGGATG TTGAGATAAT GTAGCTGAGA
CAGATTGGGA TTGCTTTTTA GGCTGTGGCT AGAATATGAC AATGTATATA TACCCTTATG ATACCCTCTT AAGTCCATGT
CAATTGCAGC AATAACATTT CTTTCAAAAT ATAGGCAAGA AAAAGGGAAC CAAAGGAAAC TGTCTTGCGA TAACGGAAAT
TCATTCATCC GTGACAGAGT AAACAATGTT TGTAACATTG ATATTTTTGA TACATTCTTA TATCTGAAGT CATTCAACAA
TCCTAACAAA CATCCCAATC AAATATTCAA AAACCAATGT TGTTCCCACA TAATTGTAGC TCACATTTTA AAACCCCTCT
ACTTTTTATA CTTTTCCTAC GGTATCTTTT CTCC

>Vigan.10G183700.01
AAAAAACGAA AAAGAAAGAG GAGGATATCT TCTTAACTTT GGCGCCTGAG ATGTCATGTC ACGATACGTA TTATCACAAG
AAACCTTATT CTATTGGGAA AATAAATAGA CATAGATTAG TGTGGGAGGA AAAATGCGAA AAAAGATAAA CGAGAGCAAC
TGAATTTCCT TTCCGGAAAA CGCAAGGGTT GTTTTCAATT GATTCTTATT TTTATACGAT AAGCACTCAA TCAGCTGTTC
TGGTTCTCGC CGCCGAGACA GTAGCGAGTG ACCACGCTGG CGTAACACCA ACGCCACTCA CTTCTTCGTT CTTTAGTTTC
CTCATTCAGC GATGCCTCCA CAAGACCACC ACCAGCCGCT GTTAGCGGAG GAGCAGGAAG AGACTGCGTA CGATTCCGCG
GACAAGGTCG TGGTGGTCGG AATCGACGAG CAGGACGGTG ACGAGGCGCT GCCGTTCTCA TGGCGGAAGC TGTGGCTGTT
CACGGGGCCG GGGTTTCTGA TGAGCATCGC GTTTCTGGAT CCCGGGAATC TGGAGGGGGA TCTTCAGTCT GGTGCCATTG
CTGGGTACTC CCTCTTGTGG CTCCTCATGT GGGCCACTGC TATGGGCCTC CTTATTCAGC TTCTCTCGGC CCGCCTTGGC
GTCGCCACTG GGAGACACTT AGCTGAACTG TGCAGGGAAG AGTATCCTGC ATGGGCTAGG ATTGTGCTCT GGCTTATGAC
TGAAATCGCT CTTATTGGCT CTGACATTCA GGAGGTTATC GGGAGCGCTA TTGCTATCAA GATTCTCAGT AATGGCGTCG
TTCCCCTTTG GGCTGGGGTC GTAGTTACAG CTTTAGATTG TTTCATTTTT CTCTTTCTTG AGAACTATGG TGTGAGGAAA
CTGGAGGCGT TTTTCGCTGT TCTGATTGCT GTAATGGCTC TGTCGTTTGC GTGGATGTTT GGTGAAGCAA AGCCCAATGG
TGTTGATGTT CTTGTTGGTA TTTTGGTTCC TAAACTTAGC TCCAGAACTA TACAACAAGC TGTTGGAGTT GTGGGTTGCA
TTATTATGCC TCACAATGTG TTTTTGCATT CTGCGCTTGT TCAATCTAGG CAGGTTGACC CCAGCAAGAA AGGCCGTGTT
CAGGAAGCTC TTAATTACTA CTCGATAGAG TCCACCATCG CCCTGGCGGT GTCCTTTGTG ATTAATATAT TTGTTACAAC
TGTGTTTGCC AAGGGCTTTT ATGGTACTGA AATAGCAAAC AACATTGGTC TTGTAAACGC AGGTCAGTAC CTTCAGGAGA
AGTACGGGGG TGGACTTTTC CCCATCATGT ATATATGGGG TATTGGGTTG TTAGCAGCCG GCCAGAGTAG CACAATTACT
GGTACATATG CGGGACAATT TATCATGGGG GGTTTTCTGA ATTTAAGGTT GAAAAAGTGG GTGAGGGCAT TGATTACTCG
AAGTTTTGCA ATCATCCCAA CAATGATAGT TGCTCTTATA TTCGATACCT CGGAGGAGTC ATTAGATGTT CTGAACGAAT
GGCTTAATGT TCTCCAATCA GTTCAAATCC CATTTGCACT CATTCCCTTG CTTTGCTTAG TGTCCAAAGA ACAGATAATG
GGCAGTTTCA GAATTGGCCC TGTCCTTAAG ATTATTTCCT GGCTTGTGGC TGCTCTGGTG ATAGTGATAA ACGGCTATCT
TTTGGTGGAA TTCTTCTCCT CTGAAGTGAA TGGAGCAGTG TTTGCAGCTA TAGTGTTTGT ATTAACAGCT GCATATGTTG
CATTCGTACT TTACCTTATT TCACGAGCCA TTACCTATAC ACCATGGCAA CGTTTAACCG GATCTAAGAC AGTTGCTACC
GCAGAGAATT GAGCAGTCGT TCAAGTTTCA CAAGTAATTT TCCTCTATTC TTTAAGGCTC ACTCGTGCTT GTTATTTGTA
AAAGAACTTG CAACTGGATG CACGGGGCAC AGGAACCTTG GTTGTCATAC TTCAACAAAA CAAAACGAGT CGGAGTTTAT
GTATCTGTAA TTCTGTCAGA ACTCTATGTA TAAATGCAGC TGTAAGCATA CCTTGGATGT TGAGATAATG TAGCTGAGAC
AGATTGGGAT TGCTTTTTAG GCTGTGGCTA GAATATGACA ATGTATATAT ACCCTTATGA TACCCTCTTA AGTCCATGTC
AATTGCAGCA ATAACATTTC TTTCAAAATA TAGGCAAGAA AAAGGGAACC AAAGGAAACT GTCTTGCGAT AACGGAAATT
CATTCATCCG TGACAGAGTA AACAATGTTT GTAACATTGA TATTTTTGAT ACATTCTTAT ATCTGAAGTC ATTCAACAAT
CCTAACAAAC ATCCCAATCA AATATTCAAA AACCAATGTT GTTCCCACAT AATTGTAGCT CACATTTTAA AACCCCTCTA
CTTTTTATAC TTTTCCTACG GTATCTTTTC TCC

>Vigan.10G183700.01
ATGCCTCCAC AAGACCACCA CCAGCCGCTG TTAGCGGAGG AGCAGGAAGA GACTGCGTAC GATTCCGCGG ACAAGGTCGT
GGTGGTCGGA ATCGACGAGC AGGACGGTGA CGAGGCGCTG CCGTTCTCAT GGCGGAAGCT GTGGCTGTTC ACGGGGCCGG
GGTTTCTGAT GAGCATCGCG TTTCTGGATC CCGGGAATCT GGAGGGGGAT CTTCAGTCTG GTGCCATTGC TGGGTACTCC
CTCTTGTGGC TCCTCATGTG GGCCACTGCT ATGGGCCTCC TTATTCAGCT TCTCTCGGCC CGCCTTGGCG TCGCCACTGG
GAGACACTTA GCTGAACTGT GCAGGGAAGA GTATCCTGCA TGGGCTAGGA TTGTGCTCTG GCTTATGACT GAAATCGCTC
TTATTGGCTC TGACATTCAG GAGGTTATCG GGAGCGCTAT TGCTATCAAG ATTCTCAGTA ATGGCGTCGT TCCCCTTTGG
GCTGGGGTCG TAGTTACAGC TTTAGATTGT TTCATTTTTC TCTTTCTTGA GAACTATGGT GTGAGGAAAC TGGAGGCGTT
TTTCGCTGTT CTGATTGCTG TAATGGCTCT GTCGTTTGCG TGGATGTTTG GTGAAGCAAA GCCCAATGGT GTTGATGTTC
TTGTTGGTAT TTTGGTTCCT AAACTTAGCT CCAGAACTAT ACAACAAGCT GTTGGAGTTG TGGGTTGCAT TATTATGCCT
CACAATGTGT TTTTGCATTC TGCGCTTGTT CAATCTAGGC AGGTTGACCC CAGCAAGAAA GGCCGTGTTC AGGAAGCTCT
TAATTACTAC TCGATAGAGT CCACCATCGC CCTGGCGGTG TCCTTTGTGA TTAATATATT TGTTACAACT GTGTTTGCCA
AGGGCTTTTA TGGTACTGAA ATAGCAAACA ACATTGGTCT TGTAAACGCA GGTCAGTACC TTCAGGAGAA GTACGGGGGT
GGACTTTTCC CCATCATGTA TATATGGGGT ATTGGGTTGT TAGCAGCCGG CCAGAGTAGC ACAATTACTG GTACATATGC
GGGACAATTT ATCATGGGGG GTTTTCTGAA TTTAAGGTTG AAAAAGTGGG TGAGGGCATT GATTACTCGA AGTTTTGCAA
TCATCCCAAC AATGATAGTT GCTCTTATAT TCGATACCTC GGAGGAGTCA TTAGATGTTC TGAACGAATG GCTTAATGTT
CTCCAATCAG TTCAAATCCC ATTTGCACTC ATTCCCTTGC TTTGCTTAGT GTCCAAAGAA CAGATAATGG GCAGTTTCAG
AATTGGCCCT GTCCTTAAGA TTATTTCCTG GCTTGTGGCT GCTCTGGTGA TAGTGATAAA CGGCTATCTT TTGGTGGAAT
TCTTCTCCTC TGAAGTGAAT GGAGCAGTGT TTGCAGCTAT AGTGTTTGTA TTAACAGCTG CATATGTTGC ATTCGTACTT
TACCTTATTT CACGAGCCAT TACCTATACA CCATGGCAAC GTTTAACCGG ATCTAAGACA GTTGCTACCG CAGAGAATTG
A

>Vigan.10G183700.01
MPPQDHHQPL LAEEQEETAY DSADKVVVVG IDEQDGDEAL PFSWRKLWLF TGPGFLMSIA FLDPGNLEGD LQSGAIAGYS
LLWLLMWATA MGLLIQLLSA RLGVATGRHL AELCREEYPA WARIVLWLMT EIALIGSDIQ EVIGSAIAIK ILSNGVVPLW
AGVVVTALDC FIFLFLENYG VRKLEAFFAV LIAVMALSFA WMFGEAKPNG VDVLVGILVP KLSSRTIQQA VGVVGCIIMP
HNVFLHSALV QSRQVDPSKK GRVQEALNYY SIESTIALAV SFVINIFVTT VFAKGFYGTE IANNIGLVNA GQYLQEKYGG
GLFPIMYIWG IGLLAAGQSS TITGTYAGQF IMGGFLNLRL KKWVRALITR SFAIIPTMIV ALIFDTSEES LDVLNEWLNV
LQSVQIPFAL IPLLCLVSKE QIMGSFRIGP VLKIISWLVA ALVIVINGYL LVEFFSSEVN GAVFAAIVFV LTAAYVAFVL
YLISRAITYT PWQRLTGSKT VATAEN*