GBrowse Details

Vigan.10G181300.01

Basic Information:
Name: Vigan.10G181300.01
Multiple alignment
Variant Information
Position: Chr10:23648151..23651935 (+ strand)
Length: 3785
Functional Information:
Description: Similar to Glycosyltransferase. [Q4VZ79, Glycine max]
GO: Cellular Component: membrane (GO:0016020)
Molecular Function: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (GO:0015018)
InterPro: Glycosyl transferase, family 43 (IPR005027)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.71,26.33,19.25,11.71,12.55,50.91, 16.93,57.17
Arabidopsis thaliana homolog: AT4G36890.1, AT5G67230.1
Automatic updates:
Name: NM_001249894 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glycosyltransferase (PGLCAT8), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:23648151..23648378 (+ strand)
Length: 228
Type: five_prime_UTR
Position: Chr10:23648379..23649079 (+ strand)
Length: 701
Type: CDS
Position: Chr10:23649242..23649784 (+ strand)
Length: 543
Type: CDS
Position: Chr10:23651288..23651519 (+ strand)
Length: 232
Type: CDS
Position: Chr10:23651520..23651935 (+ strand)
Length: 416
Type: three_prime_UTR

>Vigan.10G181300.01 class=Sequence position=Chr10:23648151..23651935 (+ strand)
GCGGTTTATC CTTAAACCCA AAGAAATGAT GAATGATTAA ATGACAGGGG CACCAACCTA AAGCCACCAG CAACCTAAAA
CCAACCACCA TCTCCAACCG ACAACCCTCT CTCTTATCTT TTCTGCTCCG AACTTCAATC TTAAAATTAA ATCCAAACAT
ATAATAGCGT AAGTGTGTTA CCACTTCAAC TCGCCAACAT TCTTTCTTTG ACTACGGACA GGGACAAAAT GAAGCTCTCG
GCGTTGCAGC AGAGTTACCT CACGCGCCGA GCCAACAGCT TCAGGGGATC CGCGCAGTTG GATTCGTCCG CCGACGGCGC
GGTGAAGTCG CCGGCGGCGA TTTTCTGGCT GGTAATCCAC GGTCTCTGCT GCCTCATCAG TCTCGTCCTT GGCTTCCGCT
TCTCCCGACT GGTGTTCTTC TTCCTGTTCT CTACCAGTCT CTACACCGCT CCGTTCCGCG GCGGAGCGGA TATCGCGGCG
CCGCTGAACG TCCCTCCGGC GGCGAACAGG ACGGCGGCGG TGAGCACTGC GAGTCGTGTG GTGGTCGGGC GGCACGGGAT
CCGAATCCGG CCGTGGCCGC ACCCGGATCC CGTGGAGGTG ATGAAAGCGC ACCGCATAAT CGAGAGAGTG CAGAGGGAGC
AGAGGTCGCT GTTCGGGGTG AAGAACCCTA GGACGGTGAT CGCTGTGACG CCAACGTATG TTCGGACGTT CCAGACGCTG
CACTTGACTG GTGTGATGCA CACGCTGATG CTGGTGCCGT ACGATCTGGT GTGGATCGTG GTGGAGGCCG GCGGAGTCAC
CAACGAAACC GCTTCGATTA TTGCCAAGTC CGGCCTCAGA ACAATCCACG TTGGCTTTTC TCCACGAATG CCGAATTCGT
GGGATGCTAG GCATAAACTC GAGTCTCGGA TGCGACTTCA TGCTTTGAGG TTAACTTTTG CTACCTCCTT TTACTCGATT
AATGTTATTA TTGTTATGCT GAGTGTAGAA ACTTTATGGA GTACTATTTT TGTTAGTGCG CGAAGCATAA TCACAGAATA
CAGTGAAAAT GCATCATGAA GACTTACTTG CGTTCGATTG ATTTTGAACA GAGTTGTGAG AAAAGAGAAG CTGGACGGAG
TTGTGGTGTT TGCTGATGAT AGTAATATGC ATAGTATGGA GTTGTTTGAT GAAGCACAAA ATGTGAAATG GATCGGAGCT
GTTTCGGTTG GAATATTGCT TCATTCGGAT GATTCTTCAT CCATGGTTCA AACGGAGGAG GAAGGTGCGG TTATGCCTGT
GCAGGGCCCT GCTTGTAATG CCACGGATAA GTTGGTTGGG TGGCACACCT TCAATTCACT GCGTTATACA GGAAGGAGTG
CGGTTTATAT TGATGATAAG GCACCTGTTC TGCCCACAAA GCTCGAGTGG TCTGGGTTTG TGTTAAATTC AAGGTTGGTT
TGGAAGGATG TTGATGATAA GCCAGAGTGG GTTAAAGATC TTGATGAATT AGATGGGGCT GATGAAGGAA TAGAGAGTCC
ACTGTCCTTG CTCAAGAGCA CGTCTGTGGT AGAGCCGCTT GGGAACTGTG GACGTCAAGT TTTGCTTTGG TGGCTACGGG
TTGAAGCCCG CACAGACAGC AAATTTCCTT CTCAGTGAGT CCTCTCCCTG ATTTTGAAGT TTTCATTTGT GATGATCTTA
AGATGTCTGG CATTCTTTTT TTATAATTTT CTGCATGATA TCTGGCATGT TTAACCATTT TGAATATGTG CGAGATTTAA
ATGTGTTTGA TAGGATGTCA AGCCCAAAGA ATACAGACCT ATTATCAGTT CTGTGCTTAT TGTGAACCTA TACCGCGGTG
CTTAGAATCA TCTTATTTGG AATAGCTGCA TTTTGCATTC ACATTTGGAC ATCGATAGAT GTAGAGTGTA GACTTATTTT
CTAGGACGAT CTGTAATTTT ATAGCTTAAT TGAACTCTAC CGAATTACCA GCTAAGATGA TGATGATACA GGTATATAAG
ACTAAGTAAG CAGAATGTAG CGTAGAAGGT AAGCTGCTGC CAAGTTGGTG CAGAATTTTT ATTGACGTTC TATATTATCA
TAGTTGTTAA GATTTTTCAT CCTGGTTTGA AAAATATCTC ACTGGGTACA CACTTCCAAT AATGAGAAAC TGAACGACTC
AATGTCATTG GGCACAAAGT TTTCTTCCCT TTTCGTCTTG CTTGTCTTAT ATAGGGGATC GTCTTTTAGA TAGTCTACAC
GACTCTCTCC CTAGGTGTTG GTTGTCTTCA GGGGTTACTA AATATAAGTG TTGAAACATG GAAACATGGT TGAGGGATAG
TTTCCATTAC AGGCATCTTG ATTATTTAAT TATCTGGACA ATGTGTAGAA TTGCAGGTTT TCTATCAAGC CATTAGTATC
TGACTGAAAG TCACGCAGTT ACGTATGCAA GTTACAGTCT TTAGATAGTC TTGGTAGTCT AAGAATGCTG GTTTGTTCGA
TTGTATTCGT TGGTTAACGT CTGTTAGTTC AATTCCTTCT TGTCAATGAT ATCCAAGCAT CTGTTGCGAA TGCCTCGATT
GGGATTTTTG TATCCTTATC AATAAAATAT TTTGGTACAT TTAAGATCTG TCCAAAGGTT ACGTAATTAA TAACTGGAAG
AAGGAACATT GAGATTTTAG TTCCACGATT AGCGCAATCT TTAAAGATTT CAAGACATCA CACGCAAGCA ATAACGACCG
TTGTTTAAGG CTGCACCGTA TTGTCTTTGT CATCTTTTCT TCATCAAGTC AATTTTCTGG ATTCTGAAAT TTGTTCTTCC
CGGGAATAAC GAAAGCTATT CCTCAAATAT GTGAAATATC GTTGTACATG AATTTACTCT TTTCACAAAC AATTACAGAA
ACATCATTCT TGTTTGACCA TAGTAGAAAG TACTGTATAA ATAATATGAC CTGTGTAGTT TTTGTGTAGA ATTAAGAAAC
ATAAACTGAA AATGTATTCC AAAACCTGTT TGACCCTAAA ATTTCTACGG AAATCACGGA GTTGTTTATT TGGGCACATA
TCATGCAGAT TTTTGTGCTT GTAATTTATG ATGTGGCATC CAACAGATAG ATGTATTTAT GTATCCCTAA CTGAGTATAC
GGTTCTACTT TATGCAGATG GATAATTGAC CCTCCTTTGG ACATCACTAT TCCATCAAAA CGCACTCCAT GGCCAGATAC
TCCTCCTGAG CTGCCATCTA ATGAGAAAGT GTTAATTGGT AGCCAAGAGC AGACAAACAA GCCCTCTACA AGGACCAAAA
CGCCTAGATC CCGGCGTAGT AGAAGTAAGA GAAAGCATGA CAGCAAAGTG ATAGGAGTGC AAGTCTCTAC ACATTCCGAG
GAAAACTAAA CAGGGATGTT AACCATTGTA TTGTACATCA GAGGAATTTA CTGCCCAGTA ACTGCTACTG GCCTTCAGCA
ACAAGAATTT GGATTCATCA ATGGAAAAAG CTGCTGCTGC ATACGTTGGT GGCGTAACTT TTATGGAGGC CCGACCCGCA
TATGTGCATC CGAGTCTGAT TTCACCCATT TTTTATATTC ATTTTTATCT CTTTTTATTG GAGTTCGTCG GAATGAAAGT
TTGAAAGGTA ATGTCGACTT GTTATGCTGC CTTGCTGAAA GCCTGTATTC AATTGTAGGG TTGTATTGGA TTGAATATAA
GGTGGTGCAT TGAATTAAGA TTTTAAAAGA TTATTCTGAC AATAGTTTTC TTTTTTTTTT TTGGCAAATT TTAAAATACT
CCTTACAAAT ATTCGGAGTT ATTAA

>Vigan.10G181300.01
GCGGTTTATC CTTAAACCCA AAGAAATGAT GAATGATTAA ATGACAGGGG CACCAACCTA AAGCCACCAG CAACCTAAAA
CCAACCACCA TCTCCAACCG ACAACCCTCT CTCTTATCTT TTCTGCTCCG AACTTCAATC TTAAAATTAA ATCCAAACAT
ATAATAGCGT AAGTGTGTTA CCACTTCAAC TCGCCAACAT TCTTTCTTTG ACTACGGACA GGGACAAAAT GAAGCTCTCG
GCGTTGCAGC AGAGTTACCT CACGCGCCGA GCCAACAGCT TCAGGGGATC CGCGCAGTTG GATTCGTCCG CCGACGGCGC
GGTGAAGTCG CCGGCGGCGA TTTTCTGGCT GGTAATCCAC GGTCTCTGCT GCCTCATCAG TCTCGTCCTT GGCTTCCGCT
TCTCCCGACT GGTGTTCTTC TTCCTGTTCT CTACCAGTCT CTACACCGCT CCGTTCCGCG GCGGAGCGGA TATCGCGGCG
CCGCTGAACG TCCCTCCGGC GGCGAACAGG ACGGCGGCGG TGAGCACTGC GAGTCGTGTG GTGGTCGGGC GGCACGGGAT
CCGAATCCGG CCGTGGCCGC ACCCGGATCC CGTGGAGGTG ATGAAAGCGC ACCGCATAAT CGAGAGAGTG CAGAGGGAGC
AGAGGTCGCT GTTCGGGGTG AAGAACCCTA GGACGGTGAT CGCTGTGACG CCAACGTATG TTCGGACGTT CCAGACGCTG
CACTTGACTG GTGTGATGCA CACGCTGATG CTGGTGCCGT ACGATCTGGT GTGGATCGTG GTGGAGGCCG GCGGAGTCAC
CAACGAAACC GCTTCGATTA TTGCCAAGTC CGGCCTCAGA ACAATCCACG TTGGCTTTTC TCCACGAATG CCGAATTCGT
GGGATGCTAG GCATAAACTC GAGTCTCGGA TGCGACTTCA TGCTTTGAGA GTTGTGAGAA AAGAGAAGCT GGACGGAGTT
GTGGTGTTTG CTGATGATAG TAATATGCAT AGTATGGAGT TGTTTGATGA AGCACAAAAT GTGAAATGGA TCGGAGCTGT
TTCGGTTGGA ATATTGCTTC ATTCGGATGA TTCTTCATCC ATGGTTCAAA CGGAGGAGGA AGGTGCGGTT ATGCCTGTGC
AGGGCCCTGC TTGTAATGCC ACGGATAAGT TGGTTGGGTG GCACACCTTC AATTCACTGC GTTATACAGG AAGGAGTGCG
GTTTATATTG ATGATAAGGC ACCTGTTCTG CCCACAAAGC TCGAGTGGTC TGGGTTTGTG TTAAATTCAA GGTTGGTTTG
GAAGGATGTT GATGATAAGC CAGAGTGGGT TAAAGATCTT GATGAATTAG ATGGGGCTGA TGAAGGAATA GAGAGTCCAC
TGTCCTTGCT CAAGAGCACG TCTGTGGTAG AGCCGCTTGG GAACTGTGGA CGTCAAGTTT TGCTTTGGTG GCTACGGGTT
GAAGCCCGCA CAGACAGCAA ATTTCCTTCT CAATGGATAA TTGACCCTCC TTTGGACATC ACTATTCCAT CAAAACGCAC
TCCATGGCCA GATACTCCTC CTGAGCTGCC ATCTAATGAG AAAGTGTTAA TTGGTAGCCA AGAGCAGACA AACAAGCCCT
CTACAAGGAC CAAAACGCCT AGATCCCGGC GTAGTAGAAG TAAGAGAAAG CATGACAGCA AAGTGATAGG AGTGCAAGTC
TCTACACATT CCGAGGAAAA CTAAACAGGG ATGTTAACCA TTGTATTGTA CATCAGAGGA ATTTACTGCC CAGTAACTGC
TACTGGCCTT CAGCAACAAG AATTTGGATT CATCAATGGA AAAAGCTGCT GCTGCATACG TTGGTGGCGT AACTTTTATG
GAGGCCCGAC CCGCATATGT GCATCCGAGT CTGATTTCAC CCATTTTTTA TATTCATTTT TATCTCTTTT TATTGGAGTT
CGTCGGAATG AAAGTTTGAA AGGTAATGTC GACTTGTTAT GCTGCCTTGC TGAAAGCCTG TATTCAATTG TAGGGTTGTA
TTGGATTGAA TATAAGGTGG TGCATTGAAT TAAGATTTTA AAAGATTATT CTGACAATAG TTTTCTTTTT TTTTTTTGGC
AAATTTTAAA ATACTCCTTA CAAATATTCG GAGTTATTAA 

>Vigan.10G181300.01
ATGAAGCTCT CGGCGTTGCA GCAGAGTTAC CTCACGCGCC GAGCCAACAG CTTCAGGGGA TCCGCGCAGT TGGATTCGTC
CGCCGACGGC GCGGTGAAGT CGCCGGCGGC GATTTTCTGG CTGGTAATCC ACGGTCTCTG CTGCCTCATC AGTCTCGTCC
TTGGCTTCCG CTTCTCCCGA CTGGTGTTCT TCTTCCTGTT CTCTACCAGT CTCTACACCG CTCCGTTCCG CGGCGGAGCG
GATATCGCGG CGCCGCTGAA CGTCCCTCCG GCGGCGAACA GGACGGCGGC GGTGAGCACT GCGAGTCGTG TGGTGGTCGG
GCGGCACGGG ATCCGAATCC GGCCGTGGCC GCACCCGGAT CCCGTGGAGG TGATGAAAGC GCACCGCATA ATCGAGAGAG
TGCAGAGGGA GCAGAGGTCG CTGTTCGGGG TGAAGAACCC TAGGACGGTG ATCGCTGTGA CGCCAACGTA TGTTCGGACG
TTCCAGACGC TGCACTTGAC TGGTGTGATG CACACGCTGA TGCTGGTGCC GTACGATCTG GTGTGGATCG TGGTGGAGGC
CGGCGGAGTC ACCAACGAAA CCGCTTCGAT TATTGCCAAG TCCGGCCTCA GAACAATCCA CGTTGGCTTT TCTCCACGAA
TGCCGAATTC GTGGGATGCT AGGCATAAAC TCGAGTCTCG GATGCGACTT CATGCTTTGA GAGTTGTGAG AAAAGAGAAG
CTGGACGGAG TTGTGGTGTT TGCTGATGAT AGTAATATGC ATAGTATGGA GTTGTTTGAT GAAGCACAAA ATGTGAAATG
GATCGGAGCT GTTTCGGTTG GAATATTGCT TCATTCGGAT GATTCTTCAT CCATGGTTCA AACGGAGGAG GAAGGTGCGG
TTATGCCTGT GCAGGGCCCT GCTTGTAATG CCACGGATAA GTTGGTTGGG TGGCACACCT TCAATTCACT GCGTTATACA
GGAAGGAGTG CGGTTTATAT TGATGATAAG GCACCTGTTC TGCCCACAAA GCTCGAGTGG TCTGGGTTTG TGTTAAATTC
AAGGTTGGTT TGGAAGGATG TTGATGATAA GCCAGAGTGG GTTAAAGATC TTGATGAATT AGATGGGGCT GATGAAGGAA
TAGAGAGTCC ACTGTCCTTG CTCAAGAGCA CGTCTGTGGT AGAGCCGCTT GGGAACTGTG GACGTCAAGT TTTGCTTTGG
TGGCTACGGG TTGAAGCCCG CACAGACAGC AAATTTCCTT CTCAATGGAT AATTGACCCT CCTTTGGACA TCACTATTCC
ATCAAAACGC ACTCCATGGC CAGATACTCC TCCTGAGCTG CCATCTAATG AGAAAGTGTT AATTGGTAGC CAAGAGCAGA
CAAACAAGCC CTCTACAAGG ACCAAAACGC CTAGATCCCG GCGTAGTAGA AGTAAGAGAA AGCATGACAG CAAAGTGATA
GGAGTGCAAG TCTCTACACA TTCCGAGGAA AACTAA

>Vigan.10G181300.01
MKLSALQQSY LTRRANSFRG SAQLDSSADG AVKSPAAIFW LVIHGLCCLI SLVLGFRFSR LVFFFLFSTS LYTAPFRGGA
DIAAPLNVPP AANRTAAVST ASRVVVGRHG IRIRPWPHPD PVEVMKAHRI IERVQREQRS LFGVKNPRTV IAVTPTYVRT
FQTLHLTGVM HTLMLVPYDL VWIVVEAGGV TNETASIIAK SGLRTIHVGF SPRMPNSWDA RHKLESRMRL HALRVVRKEK
LDGVVVFADD SNMHSMELFD EAQNVKWIGA VSVGILLHSD DSSSMVQTEE EGAVMPVQGP ACNATDKLVG WHTFNSLRYT
GRSAVYIDDK APVLPTKLEW SGFVLNSRLV WKDVDDKPEW VKDLDELDGA DEGIESPLSL LKSTSVVEPL GNCGRQVLLW
WLRVEARTDS KFPSQWIIDP PLDITIPSKR TPWPDTPPEL PSNEKVLIGS QEQTNKPSTR TKTPRSRRSR SKRKHDSKVI
GVQVSTHSEE N*