GBrowse Details

Vigan.10G157100.01

Basic Information:
Name: Vigan.10G157100.01
Multiple alignment
Variant Information
Position: Chr10:21542333..21547209 (- strand)
Length: 4877
Functional Information:
Description: Similar to Uncharacterized protein. [V7CKY4, Phaseolus vulgaris]
GO: Molecular Function: acid-amino acid ligase activity (GO:0016881)
InterPro: Ubiquitin-conjugating enzyme, E2 (IPR000608)
Ubiquitin-conjugating enzyme/RWD-like (IPR016135)
Ubiquitin-conjugating enzyme, active site (IPR023313)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:190.76,93.23,54.35,63.39,77.26,55.32,89.98,44.86
Arabidopsis thaliana homolog: AT1G75440.1
Automatic updates:
Name: NM_001250347 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305572 (LOC100305572), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:21542333..21542960 (- strand)
Length: 628
Type: three_prime_UTR
Position: Chr10:21542961..21543056 (- strand)
Length: 96
Type: CDS
Position: Chr10:21543290..21543378 (- strand)
Length: 89
Type: CDS
Position: Chr10:21546509..21546572 (- strand)
Length: 64
Type: CDS
Position: Chr10:21546671..21546773 (- strand)
Length: 103
Type: CDS
Position: Chr10:21546922..21547025 (- strand)
Length: 104
Type: CDS
Position: Chr10:21547117..21547146 (- strand)
Length: 30
Type: CDS
Position: Chr10:21547147..21547209 (- strand)
Length: 63
Type: five_prime_UTR

>Vigan.10G157100.01 class=Sequence position=Chr10:21542333..21547209 (- strand)
GAATCTCTTC TTCTTTGTTC ATTGAGAATT GTTCCTGTAC CCATTCGTGT ACGCGGAAGA ATCATGACTA GTTCTTCTGG
TGCCGCTCGC AAGGTTAGCC CTAACCCCTT TCGCTCTTCG ATTGTCTTTC TTGGTTGTTC GTTTTTCGGT TCTTAGGTTT
GAATTGGGAT CGTGGCTGTT TTAGAATCTC AGTAAGATTG CCTGCAATAG GCTCCAGAAA GAGCTCGTGG AGTGGCAGGT
CAATCCCCCA ACTGGTTTCA AGCACAAAGT CACCGATAAT CTCCAGAGGT ATCGGATTCT TCTAATTACC CCTCATAATC
CACCTAACTT TTTTCACTTT TACACAACAT GTTTTCTTAT GCTTTGATTT CCTCTTTCTC TTCTTCCTTT GCATTCTTTT
TTCTTTCCCC CACTTTGCTT TGTTCCTCCC TGGAAGGTGG GTTGTTGAAG TCACTGGAGC TCCCGGGACA CTTTACGCCA
ATGAGACCTA CCAGCTTCAG GTCGATTTTC CCGAGAATTA CCCTATGGAA GCTCCCCAGG TTCCTCTTTT GCCCCTTCCT
TGCACAATTT AATATTTAAT CTGCACCGGT GTCTGTTGTT CACTGCTATT ATTATTCTAT TGTTAACGGT TCTACAGGTC
ATATTCTTGC ATCCGGCTCC GCTGCATCCC CATATCTACA GCAACGGCCA TATTTGTTTA GGTATGTGTG TGTTTTTTAT
AGTTACCGTA TTTTGAGTAT AATCCTCTGG CACACCCTTT TGTTACAGGG TTGTGTTATT TGTTGCTTTT TATGTTTGTT
TGTATTGTTT TTCATGTTGT CGATTCTTTC GGACACTGGC TGTTCTTGTT ACCTTCTTCG GGTTATAATT TTCCTTGAAG
TCCCGACTTC GAAGTTAGAA TTTCTTGTTG AGAACTGTTG GGAAGAGGAC TGCGATTGAT TGTTTACTTG TTTAGGGTTC
TCCTAGTACA TGAGAAAATC AATTCTTTTT TCTGAAAGAA TTGTCCTGAT TAATTGATTG AAAATATATT GTTAACTATT
AACTGAGACA TTTGGGTTTC AATATAGTGA ATGGTTTTAC ATTGTTGATG AAGTCTTACT GTTTTAAGTA AGTATGAAAA
TTGTTGGGAA CTCTTAGCAT AACCCAATTG AAATTTGAAA GCAGCTAACA TTTAATAAGT TAATAAACCA TAGAGAATGC
ACGGAACACG TGTGAACGGC CATGATAATT TTGCAGATGT GTATGTCCTC AGCTCGGTAT GCCCAAGAAT GTAATTGGAC
CACAATAGTA AATATGCTAG GAGTGTTATT TTATGGCTGT GAATTGTGAT GGTGTCCTAT ATAAACTGTT GTATGCTATA
TATGCCAGGA ATAGAGAGAA GTCAGAAGTG TGGGTCCTTC TTGCCAACTG TTTTTCACTT TGGTGTTTCA GTGCCTTCAC
ATCTTGTTTA GTTTTGGTGT TAGAATGGAG CAATTCTACT TTCCCAGCTG ATTTTTAAAT CTAGTAATTT GTTGTTTCTG
ATAAACTGTA GACGACTCTG AACTGTGATC CATTATTAAA TTGATGTGAT TCTGAAGTAC ACAAAACATT GATATGATTC
TGAAGTACAC AAAACATTGA TATGATTCTG TTAACATACA TGAAACAAAC GATCCAATAA TTCATTTTTT ATATTCCGTT
CCAATTTTCA TGAGTCATAA AAATTTCAGA GAAGCTCAAA TTCTCAAACA AAAAGAAATT GAATTAAATG CACCTTATTT
AATTACTCCA TTCCTATGTT TTTCATTCTT TTGAAATAGG GGCTTCGCAT AGTTATTAAA CCACTTGCGC ACTATTTGGT
TTTTCCATTT CTCCATTATC AATCTTCTGC AATAGAAGCT TGACAGTCAC CTGCTTACTC TCTATGTTCC TGGTTTTGCT
GCATTGTTGC TTTGTATTTG TTCTTTTGAA CTATAGGCTT CAAGTAGTAC GGTCACGCTA TGAGCCTCCT AAGGCTAAGG
AGATGAAGGA TGTTACCTCA GCTTTGAACT TTTTTCGCAA ATATATTTCT GTTAGGATGA ACTATCATTA TTAGGAATAC
GTATAGAATT ATGACTTGTG AATTTACTTG TGACGCGGCT TTTACTGACA TAATAGTATT ATTGAAATTT ACTTTTCTTT
GGTGATGTAA GATTATGAAC ATTTTGATAC TTTTGAGTAT TATTCATAAT GTTTTAGGTA TTTAATATTA ATATATTACT
GCCTTTGGTT TTTATTATAA GGCACATTTT GTAAGGAATT GTTGGTCCTT TTTATAAAGC ATTTTATAAT ATCTATTCAA
CTTTATATTT TATTTTCCTT GTTTAGACCT ATTAAACATT ATAGGTATTT GTATTTTATA TTAATTAATA GTAATGTGAA
GATAGTTTTA AAAGTCATTA ATAATGAGTA TTAATTTGGT ACAATGGTTA TATTTTTAAA AGATCAACTA GACTATTGTT
TTCATTATCT GTGATTATGT TAGAAGTGTC TTATTTTAAG GAACAGAAGG AGTATTTAGA ATGATTCTAT GGCTTATATT
TCTAAAATTG AACAAATGAT TATTGATAAT ATTGAATTAT ATTCCAATGT TCATAATCTT CTTTTTCTCC CATTCTATTT
GGGCTGAGCT GCTTCTGTTG TTTTCTTTTT CTCATCTTCT GGGATGAATT GAGTCGGAGT TTGTACTGCA TAATGAGTTG
TAAGATATCC AACTAAGAGA AATTGTACGT GACTGATCAG ACAAATGCGC GTTTTGTCTT TTTCTTTTTG CTGGTTGGCA
AATGGTTGTC AGTTATGCCA AGAAATTTTT TCAAGGCCTC TTCTCCCCGC AGCCCCCCCT CCCACACACA CACACACACC
CCAACCCCCA CTTTTTTTGT TCTTAAGAGT AGGCATTTGA AGGAGGGTAG CAATGGAGAG TGTATGATTG AAGTTAGGAA
TGCATTATTT TCTGCTTTAT TCATTCATGC CAGGCTAGAT ATCCAACTAT ATTAAAAATT ACCATTGTAC AATTTCTAGA
GTGAAATTCT TACTCTTCTA ACTCTCTCAA TTAGATCTTC AGTCTTTACT CTCTTTTGAT ATTTGGACAT TTCACATATT
CTCAACTAGC TCTAAAAGTC CTCTTAATCA TCTAAAACTA CCATTCTTTT ATCTTTATTT TCCTACTTTT AACCTGTTTT
TTTATTGCTA TATATAAATT AAATTTGAAT AGTTTAAAAG TAAATTGGTA ATGATCTTTT ATCACAACTA AAATTGTTCG
ATTCAAAGTT TTATTGGTTT ATTATGATTT TTAACTTTAA TATATATATA TATATATATA TATATATATA TATATATATA
TATATATATA TATATATATA TATATATATA TGTATATGTA TGTATATGTA TGTATATGTA TGTATGTATA TGTAAATATA
TATATATGAA ATATTTTTTA TAATGAACTT TAAAGTATGT AAAAGGGGTT TATCTTTCGC ATTCAGGGGT TTGATGTTTC
CAGAGTTTTA CTTTTATGTA ATCAATATTA TCGTTGTTAT TATTATTGTT TCTATATATG AATTCTAAGT TGAGGTATGA
TTCATTTCTC ACTTCTGGGA ATTTGATGTT TGTAGTTATA CTTTGACATA ATCGAAAATA TTTTTCTTAT TTAAATATTC
GGTTTTTAAA TCTGGAGTAT CTGAAAACCC ACTTATTGAA GTTTGTAATA CTTGATGAAA AAAATTTCTT TCTAGATTTA
GATTGAAACA TGATTAACTA GTTGCTACTT GTTGGTGGTC AGCTGAGATT AATATGCTTG GAATTATGCA GATATATTGT
ATGATTCCTG GTCCCCTGCC ATGACAGTTA GTTCTATCTG CATCAGTATT CTCTCAATGC TTTCTAGCTC GACCACAAAG
GTGTGAATTT ATTTACTGTG AATCTTGTAT TTTCCTACTT ATTCCATGTG CTGTGATAGT ATTAATGGAC ACCTAGGACA
TGCTATATTT TTAACAAGGT TTTATTACAT TTTGATTTGA TAAATGGTAG GTTATATTAC TTAAGATTCT ACGGGTGAAT
TTAGGTAGGT CATTGATCCA TCTTGAAATG GTTGTCATGC CTTAATAAAC TCATGACTTG ATTTCTTTGG CAGCAACGCC
CTGAAGATAA TGATCGCTAT GTAAAGAACT GCAGAAATGG CAGATCGCCT AAGGAGACTA GGTGGTGGTT CCATGATGAC
AAAGTATAAA AAAAAGTTTC TCTATTAAGT CCACAAAAGG TAGAGAGTAG AGGATTATCC TTTTGAAATC AAAATGAAAT
GGGAAAATGC ATTTTGAGAA ACCAGGATCC CTTTAAATTA ATTGGATAAT AACTCTGCTG TAAATTGTCA TTGCCTGGTA
TTTGTAAAGG AAGGGGAAAC TGTGTCTTAA GCAACTTAAG GAGCAAACGA ACTCAAAACA TCGTGGTTAA TCCCTGACTG
AGGTCTTTGG ATGTGGATAT AGATGGTCTG GTTAACCCCC GTATTGCTGA CTTGTGTTTA ATAATTCTCT TAAGAATTGT
CCACTATAAC TCATAATTGA CTATATGCAT TTCCGACTTT CAGTAATGAT ATAGAAAACA ACTCCTCATA CATCTTTGGT
CGTAAGTACG GGGTGCTCTA ATCTTTCCTT GTACTCAGCT CTTAAACTTG TCGATGCATC AATTTGTTAG GAACACTAGA
AAAATGCGAC TTTACTTTTT GTTCTTCCTT TTATATCACC TAGTTCTTGT TACTCATTTT CTTGGGTAGA AAAGCTTCGA
GAAGGGAACG ATTAAATCTT TCTAGTCCAA AGGGGACGGT AAGACAAAAT TGTTTTTCAA TATGAATTGC ACTTGAA

>Vigan.10G157100.01
GAATCTCTTC TTCTTTGTTC ATTGAGAATT GTTCCTGTAC CCATTCGTGT ACGCGGAAGA ATCATGACTA GTTCTTCTGG
TGCCGCTCGC AAGAATCTCA GTAAGATTGC CTGCAATAGG CTCCAGAAAG AGCTCGTGGA GTGGCAGGTC AATCCCCCAA
CTGGTTTCAA GCACAAAGTC ACCGATAATC TCCAGAGGTG GGTTGTTGAA GTCACTGGAG CTCCCGGGAC ACTTTACGCC
AATGAGACCT ACCAGCTTCA GGTCGATTTT CCCGAGAATT ACCCTATGGA AGCTCCCCAG GTCATATTCT TGCATCCGGC
TCCGCTGCAT CCCCATATCT ACAGCAACGG CCATATTTGT TTAGATATAT TGTATGATTC CTGGTCCCCT GCCATGACAG
TTAGTTCTAT CTGCATCAGT ATTCTCTCAA TGCTTTCTAG CTCGACCACA AAGCAACGCC CTGAAGATAA TGATCGCTAT
GTAAAGAACT GCAGAAATGG CAGATCGCCT AAGGAGACTA GGTGGTGGTT CCATGATGAC AAAGTATAAA AAAAAGTTTC
TCTATTAAGT CCACAAAAGG TAGAGAGTAG AGGATTATCC TTTTGAAATC AAAATGAAAT GGGAAAATGC ATTTTGAGAA
ACCAGGATCC CTTTAAATTA ATTGGATAAT AACTCTGCTG TAAATTGTCA TTGCCTGGTA TTTGTAAAGG AAGGGGAAAC
TGTGTCTTAA GCAACTTAAG GAGCAAACGA ACTCAAAACA TCGTGGTTAA TCCCTGACTG AGGTCTTTGG ATGTGGATAT
AGATGGTCTG GTTAACCCCC GTATTGCTGA CTTGTGTTTA ATAATTCTCT TAAGAATTGT CCACTATAAC TCATAATTGA
CTATATGCAT TTCCGACTTT CAGTAATGAT ATAGAAAACA ACTCCTCATA CATCTTTGGT CGTAAGTACG GGGTGCTCTA
ATCTTTCCTT GTACTCAGCT CTTAAACTTG TCGATGCATC AATTTGTTAG GAACACTAGA AAAATGCGAC TTTACTTTTT
GTTCTTCCTT TTATATCACC TAGTTCTTGT TACTCATTTT CTTGGGTAGA AAAGCTTCGA GAAGGGAACG ATTAAATCTT
TCTAGTCCAA AGGGGACGGT AAGACAAAAT TGTTTTTCAA TATGAATTGC ACTTGAA

>Vigan.10G157100.01
ATGACTAGTT CTTCTGGTGC CGCTCGCAAG AATCTCAGTA AGATTGCCTG CAATAGGCTC CAGAAAGAGC TCGTGGAGTG
GCAGGTCAAT CCCCCAACTG GTTTCAAGCA CAAAGTCACC GATAATCTCC AGAGGTGGGT TGTTGAAGTC ACTGGAGCTC
CCGGGACACT TTACGCCAAT GAGACCTACC AGCTTCAGGT CGATTTTCCC GAGAATTACC CTATGGAAGC TCCCCAGGTC
ATATTCTTGC ATCCGGCTCC GCTGCATCCC CATATCTACA GCAACGGCCA TATTTGTTTA GATATATTGT ATGATTCCTG
GTCCCCTGCC ATGACAGTTA GTTCTATCTG CATCAGTATT CTCTCAATGC TTTCTAGCTC GACCACAAAG CAACGCCCTG
AAGATAATGA TCGCTATGTA AAGAACTGCA GAAATGGCAG ATCGCCTAAG GAGACTAGGT GGTGGTTCCA TGATGACAAA
GTATAA

>Vigan.10G157100.01
MTSSSGAARK NLSKIACNRL QKELVEWQVN PPTGFKHKVT DNLQRWVVEV TGAPGTLYAN ETYQLQVDFP ENYPMEAPQV
IFLHPAPLHP HIYSNGHICL DILYDSWSPA MTVSSICISI LSMLSSSTTK QRPEDNDRYV KNCRNGRSPK ETRWWFHDDK
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