GBrowse Details

Vigan.10G149200.01

Basic Information:
Name: Vigan.10G149200.01
Multiple alignment
Variant Information
Position: Chr10:20804135..20805498 (- strand)
Length: 1364
Functional Information:
Description: Similar to Uncharacterized protein. [I1LI42, Glycine max]
InterPro: Uncharacterised protein family UPF0434/Trm112 (IPR005651)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.18,4.29,8.21,9.67,11.74,11.14,5.20,10.72
Arabidopsis thaliana homolog: AT4G35905.1
Automatic updates:
Name: NM_001250993 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500428 (LOC100500428), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:20804135..20804711 (- strand)
Length: 577
Type: three_prime_UTR
Position: Chr10:20804712..20804840 (- strand)
Length: 129
Type: CDS
Position: Chr10:20805186..20805240 (- strand)
Length: 55
Type: CDS
Position: Chr10:20805318..20805406 (- strand)
Length: 89
Type: CDS
Position: Chr10:20805407..20805498 (- strand)
Length: 92
Type: five_prime_UTR

>Vigan.10G149200.01 class=Sequence position=Chr10:20804135..20805498 (- strand)
ATTCATTAGA GGGCCATTTT GCAATTTATG AAAATTATTT GTAAGGGGTA CCTGGCAGTT TAGCGTGAAA GAGAGAGTGA
AGTTGAACAG AAATGGTGAA AGGAAGTAAA GAGATTCTGC AAAAAGCAGC CAAAACCCTA TCCGACATCC TCGTTTGCCC
TCTCTCTAAG CAACCTTTGA GGTTCCCCTC TCAATTTCTT CATAACTGTT CATAATTTTC TTCATTTTTT TACTAATAAT
CTTTCTTTGG TTTTGCAGGT ATTGTGAGGA ATCAAATTCC CTGATCAGCG ATGCTATTGG CGTTGCCTTT CCCGTCGGTT
CTAATTCCCC TCTTCTCTTT CATTTCAATT TCACTTTCTG TTCCTTTTTT ATCCTTTTGG GAATTTTATG GATCCTTATC
AGCTGACAGT GTTGTTTTAC TGCCGAAATC CTAATTTTCT CCGCGAGGGT TACTGCATAA GCCCCATTTC CCAGCATCTA
CGAATCTGTA GTTTGTTCTA TCTGTAAATT CAGGAATCTT GAAGGATTAT AAAATGTTTG TAATGAAAAC GTTTATTACA
GGGGAAAATC ACCCCTCTCT CCAATAATAA CGTGCATATT GTTTAATGGT GAGTGTTGAC TCATGTAGTT ATGTTTCTTT
TTTCTTTTTA CTTGTTAGAT AAAAAATGGG GTACCGTGCT TGGTTCCAAG AGATGGGAAG ATACTTGAGG AAGAAGATGC
GTCAAAACAT GATAGTGATA CCAATTTATC AGCCGTGAAT GAAGAGAGTC TTGGAAGAAG TGCCTGAGAT TAAGTTGTAA
GATTTTTTTA TGTTTGGATT TCAATTCATT AGGGTTGGTT GCTGTTATTC TTTCTATGAT GATCAACTTT CTGTGACCCT
GCTGACAGTG TAACGTTGTG TGAGAGATTT CACTTGGAGG GAAGAATCGT GTTTTTCTTC TTTTCCTTGA ATGAAAAGAA
TTTGAACAAT TTAATCTCAC TTTCCCCCTT CCCTTTTCGT TGTTTGTATT AATAGCTGAT TTGTATCTCC CAGAGTTCTC
TAACTGTATG ATTCGAGGTT TATTATTATA CTCTTGTGAA AATTAGTAGT GGTAAACAGA AGTTGTAATT TGTTTGGTTC
AATTACAAGT GTTGAGGATG CTAACCTCTG TTAAAGTGAT ATAAGGCTAT GGAGATCTAT AATCAATAGC TTTACATAAA
GATGAACCTG GTCCATGGTG TAGGAAATCG AGAGCACTTT CAATTTTTTT TCTTTGGTGT CTTCTCCCTG TATATTCTTT
TAACTTTTTG ACTTGTCTGC ATTGTAAATA TATAGTACAT TGTAATATAA TCTTTCTGCA ATAACAAAAT TAGAAACTTC
TGTA

>Vigan.10G149200.01
ATTCATTAGA GGGCCATTTT GCAATTTATG AAAATTATTT GTAAGGGGTA CCTGGCAGTT TAGCGTGAAA GAGAGAGTGA
AGTTGAACAG AAATGGTGAA AGGAAGTAAA GAGATTCTGC AAAAAGCAGC CAAAACCCTA TCCGACATCC TCGTTTGCCC
TCTCTCTAAG CAACCTTTGA GGTATTGTGA GGAATCAAAT TCCCTGATCA GCGATGCTAT TGGCGTTGCC TTTCCCATAA
AAAATGGGGT ACCGTGCTTG GTTCCAAGAG ATGGGAAGAT ACTTGAGGAA GAAGATGCGT CAAAACATGA TAGTGATACC
AATTTATCAG CCGTGAATGA AGAGAGTCTT GGAAGAAGTG CCTGAGATTA AGTTGTAAGA TTTTTTTATG TTTGGATTTC
AATTCATTAG GGTTGGTTGC TGTTATTCTT TCTATGATGA TCAACTTTCT GTGACCCTGC TGACAGTGTA ACGTTGTGTG
AGAGATTTCA CTTGGAGGGA AGAATCGTGT TTTTCTTCTT TTCCTTGAAT GAAAAGAATT TGAACAATTT AATCTCACTT
TCCCCCTTCC CTTTTCGTTG TTTGTATTAA TAGCTGATTT GTATCTCCCA GAGTTCTCTA ACTGTATGAT TCGAGGTTTA
TTATTATACT CTTGTGAAAA TTAGTAGTGG TAAACAGAAG TTGTAATTTG TTTGGTTCAA TTACAAGTGT TGAGGATGCT
AACCTCTGTT AAAGTGATAT AAGGCTATGG AGATCTATAA TCAATAGCTT TACATAAAGA TGAACCTGGT CCATGGTGTA
GGAAATCGAG AGCACTTTCA ATTTTTTTTC TTTGGTGTCT TCTCCCTGTA TATTCTTTTA ACTTTTTGAC TTGTCTGCAT
TGTAAATATA TAGTACATTG TAATATAATC TTTCTGCAAT AACAAAATTA GAAACTTCTG TA

>Vigan.10G149200.01
ATGGTGAAAG GAAGTAAAGA GATTCTGCAA AAAGCAGCCA AAACCCTATC CGACATCCTC GTTTGCCCTC TCTCTAAGCA
ACCTTTGAGG TATTGTGAGG AATCAAATTC CCTGATCAGC GATGCTATTG GCGTTGCCTT TCCCATAAAA AATGGGGTAC
CGTGCTTGGT TCCAAGAGAT GGGAAGATAC TTGAGGAAGA AGATGCGTCA AAACATGATA GTGATACCAA TTTATCAGCC
GTGAATGAAG AGAGTCTTGG AAGAAGTGCC TGA

>Vigan.10G149200.01
MVKGSKEILQ KAAKTLSDIL VCPLSKQPLR YCEESNSLIS DAIGVAFPIK NGVPCLVPRD GKILEEEDAS KHDSDTNLSA
VNEESLGRSA *