GBrowse Details

Vigan.10G140800.01

Basic Information:
Name: Vigan.10G140800.01
Multiple alignment
Variant Information
Position: Chr10:19875529..19880652 (+ strand)
Length: 5124
Functional Information:
Description: Similar to Uncharacterized protein. [I1J8C1, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:9.35,8.03,8.89,6.05,7.12,3.15,7.07,11.36
Arabidopsis thaliana homolog: AT2G17530.1, AT4G35500.2
Automatic updates:
Name: NM_001255203 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max serine/threonine-protein kinase SRPK2-like protein (LOC100784192), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:19875529..19876840 (+ strand)
Length: 1312
Type: five_prime_UTR
Position: Chr10:19876841..19877023 (+ strand)
Length: 183
Type: CDS
Position: Chr10:19878072..19878857 (+ strand)
Length: 786
Type: CDS
Position: Chr10:19879966..19880013 (+ strand)
Length: 48
Type: CDS
Position: Chr10:19880093..19880404 (+ strand)
Length: 312
Type: CDS
Position: Chr10:19880405..19880652 (+ strand)
Length: 248
Type: three_prime_UTR

>Vigan.10G140800.01 class=Sequence position=Chr10:19875529..19880652 (+ strand)
GTCAACTTAT CAATTATAAA TTAATTTATC ACTTATAAAA AAAGTTATAA ATTAGTTTTA CGAGAAATGC TGCAAATAAA
AGTCTATAAT GCATAACATA ACATGTTCTC TAACACTGAC AACAAAACAT ATTCTCTCTG CACTCATGAT GTTACTTATG
CATTTAGCTT TTCATGCCAT TTTCAGCTTT TAGGTCCATC AATTTAAAAA AAAACTACAA ATGATTTTAT TTTTAACCAT
ACCAATCTGC TTCCAATTTA TTCCACTACA TTTTACTGTC ACATTAATTG CCAGCTTCAT AGGTATATGA GATCTTAAAA
GGGAAAAAGA ATGACTGATA AAGTTTAAGA ACTTAGCATC AGTGAATCAA TTCAGCTACA AAGACCACAA CATTAAAATG
GAAAAGTTAA TGAAACACTT TGAATGGAGT AGCTGTTTTT CTGAGACAGT CATGCCATGT GCTAGTGTGA TCCTCCTCAG
TCATATCTAG AGATGCTTTA TGTTAGAGAG GAAGTATAGT AGAGAGGTTT TAAATTAATG CTTGAAAGGT GTTTGAATAA
ATTCATAAAT GAGAAGAATA ATAAGCACAA GATACACTTT CTAAGTAAGT AGCATTACAA AAAGTAAGAA AATACATGAA
TTTTTAGTTC AACATATTGA TGGCACATTA GACTAACAAG TCAAATCAAA TCTACGCAAA ATAAAACCGA ATAAATAAAC
CGAGACTTTT AAGATTTACT ACTAAATTAA CTCATGAAAT TATTAGTTGT AGGAGTGATT AAGCAGGTCA TTACCTAGGA
ACCCTAGAAA AACAAAGAAA GAAACAAACC ATAAAGACAT ACATTAAAAA AAAAAGGTGC ATGATGTTGG AAATGACAGA
AGCCCACAAA GCTGTTTCAG AGTATGATTG CTCCACCTCA CTTGGAAACA GACAGTTGAA ATTATGGAAT CCCGAAAATA
GTCAATGACA GAGGTAAACC AACCAAGGAA AACGAAGGGC ATAGAGGGAA TGATAAAGAC GATGGGCTAT GAAATTGGAG
TAGGAAAAAT GGAAGACCCA CACATCACAT GAAGAAAGAA AGAGAAAAAA GTGGAGGAAT AAGGAATAGG AATTGCATCC
TCCTAAACAA AAGCCTCACA CACCGCAAAT ATAATAACGC TTCATCCTCC TAAACAAAGA CTTCGCGTCC AAGCAATTTC
CGAGTTAAAG AAGATATATC AAAAGGGGAA AGCAGAGCGA ATCACTGGAG AATTTTCAAG AAAGAATCAG ATTTTGAGTT
TCTTTTGGTG AATCTGAATA GATCAGAAGG TGATGTCGTG TTCGTCGTCG TCGGGGTCGG AGGAAGACGA TGAGGGATTC
GACTCTTACC GGAAAGGAGG TTACCACGCC GTCAGAGTCG GCGATCAGTT CGGCGGCGGC AGGTACATAG CGCAGAGGAA
ACTGGGTTGG GGTCAGTTCT CCACCGTCTG GCTTGCTTAC GATACTAAAA CTTCCGTATG TTTCTTACCC ATCTTTTTTC
CCCCTTTATT ATGTCGTTTT TTTTCTTTGT TTTCTGCAAA AAGGCGTCGT TTTGAGACCA CCCTTTTTGG GTTTGGATTT
TGAGCTGTGA TGAGTGTACT GGGTTTGAAA ATTTTCATTG TGCTTTGTTG GTTGGAAATT TGCGTCCTTT GAATTTTGTG
GAGGTTCCGG GATCTTCGGT TCTTGTTTGG GCACCTTTAT GTCGTTTTGT GTCTGAGATT ATTTGGCTTC TTGATGTTGA
TTGCTTGCCA CTTTGGAAAT ACGAATCCAT GATTCCTCCT TTTGTTCAAC TTGTGTCATA AAAAGGAATC TATGCATGTT
GGTTTAACGG GAAATGGTGA ATGGTCCTCA CAGAATGTGA CCACCTGGTT TACATGGGTG ATAGATTTGT CTGTACATAG
AGGGGCAATA AATGTGCCCC TGCTCCTTCT GTTTGAACAG CTTGATTCTG ATTTGGTGAC GATTTTGTGT ATTAAGCACC
TCGGTAACCG TGACACTGGT GTTTCAATTT TAATATAAGG GTAAACGTGA GCTGTATATG GAATGGTAGT TAGTTATTGC
GGTTCTGAAG TTAAATTCTG ATTCAGCAGA GGTGAAGGTT AGGACTAAGG AATGAGTCTT TTATGTGTAT AACTGCCATC
TAGATGGATC CAACACTTCT GCCACCATAA ATCGCATAAC TTGTAATTGT AGGTTCTTGC TAGTGCTTGA ATTTAGAAAG
CAGAAAATGG TGCAAATCCT AAGAAGAAAA TAAGTTTAAG CTATACAGCA TATGCACAAT GACACTCTTC AGTGGTACAG
GTGGGGTTGT TCCACGGTGA ACCATGTCCA ACTTCATCCT TTGTTCATTT ATGTGTGTTT TTGATTCAGA AACCTTATAT
GAAGGTTAAA CATGTATGTA CGGTTGTTTA TTTATTCTCA GAGTTTACCT TTACCCCCAA ACATGGTATT TTCTTGTTAT
TTTTGTGCAC CAGCTTTCAT TTTCTTTTCC AATTTTATCT AATTTTTAGA TTGTGGTTTT CAGTCATTTG TTGCTCTCAA
GATCCAGAAA AGTGCCGCCG AGTTTGTTCA GGCTGCCCTT CATGAGATTG ATATTCTTTC ATCCATTGCT GACCATGACC
CATCAAATTC AAAATTTGTG ATTCAATTGA TTGACAACTT TAAGCACACT GGTCCAAATG GGCAGCATCT TTGCATGGTC
CTGGGGTTTC TTGGCGATAG TTTGCTTCGC TTGATCAAAT ATAACCGTTA CAAAGGCCTT CCATTGAATA AAGTTAGAGA
GATTTGCAAA TGCGTTTTAA TTGGTTTGAA CTACTTGCAT ACTGATCTTG GTATAATCCA CTCTGACCTA AAACCTGAAA
ACATTCTTCT ATGTTCAACC ATTGATCCTG CCAAAGACCC TTTAAGATCT GGACTCTCTC CAATTCTAGA GCGACCTGAG
GGAAACACAA ATGGTGGAGT ATCAAGTCTT ATTGAGAAAA GGTTGAAAAG GAGAGCAAGG TCGGCAGTTG CTAAGATATC
CGGAAGGAGA GGGTCAATGG GAGGAACAGA AGATGTTGCA AAGACCGGTA GAAACATTAA TGGGATTGAT GTGAGATGCA
AGATAGTAGA TTTTGGAAAT GCTTGTTGGG CTGAGAAGCA GTTTGCAGAA GAAATACAGA CAAGACAGTA CAGAGCACCT
GAAGTTGTAC TGATATCTGG CTATTCTTTC CCTGTTGACA TGTGGTCTTT TGCTTGCATA GCTTTTGAAC TAGCCACTGG
AGATATGTTG TTTACACCAA AGGGTGGACA AGGTTTTAGT GAGGATGAGG TATGGTGATT TCATTAATAC TATAATGGTT
AATTACACTT TTAAATCTAA CGCAATTATA ATTAATTATA AATGGTCTTG CATAGACTGT TTAGCTTAGA TTTCTTTGGC
ATAAATTATA GATAAAAGCA TGTTTTCATA ATTCAATAAT TCGATTAACT AGTTTGAGAG GAGGTTTAGG TGTGGAGTTG
GTGCTGGAAA TCACTCTTGA TTATTGGCTT TAAAGGGTGC TGGAAATCAC TCTTGATTAT GCTACACTTT GGTGCATCTG
GTTGGATCAT AATTCCATAT TTTTTAAGGA GGTGCTTTAA TTTTGTGTAA AGCATGTGAT CTTTTTGAAA GTAGCAAGAC
TATCAGAAAC GATTTGAAAA AAATGGTTGA ATCTTGTTAT CTTTTGTCGC TAATACTTAC AAATACACTT ATATTGCTTT
TATTGTGGAA TATGTGAAAG GTAACATAAT ACAAAAGAAT AGAATTCATT GAATCACCTT GTTAAACCAG TAAGCCAGAT
GTCAGTTTGA CAAAATTTCT GTGCTATTTT ACTAAAGCAT TTTTTGCATC GTTCATGACA AAATAGTTGA CAGTAATTGT
ATAATCAGTC TCGAGTGCCA AGATTATTTT AGAATATCTC TTCTGTTGTA ATAAATTATC TGTAAGTATT CATGTTTTCA
TCTTTTTATG ATCCTTTTAC AAGCTACAGG CCTGATGTGA GTGGAACTAA AAATGTTTTT TCTGGTTGCG TTTTTATTTC
TGAAAATGAG TTCTTACAAT CATAGGATGA AATTGAAAGT TCCACGATTC TGATCTGTGA TCAACAACTC TTGAAATAGC
TACAGTAAGA AATCTATCAA ATTGTAGTTT CCAAAGCTGA AGCTTTTAAT CTTGGCTGAT ATTGTTGCCA AAAAAGAGGG
TCAAGATTGA GTTTTTGCTT CATGGATTGG AGTCAGAACT ATTCTTTGAT CTGTTCATCA ACAAAAAGGA AGGAAAAAAT
CACCACGGTC ATTAATGTTA GGTCACATGT GATTGATTGC CTGAACTTGT TGAACACAAG TCTACCCTAA AGATTTTTTT
AGCAGAATAC TAAACTCTGC ATTTTTGTTG ATTTTAGGAT CACCTCGCCC TGATGATGGA ACTCCTTGGA AAGATGCCCC
GGAAGGTGAG TACACTCTTG AACACTTTGT TCATATAGTT TATTGAAGGG CTACTCTGTC ATATCTAATG CTTGTGAGTT
GCAGATTGCT ATTGGTGGAG CTCAGTCCAA GGATTACTTT GACAGGCATG GGGATCTAAA AAGGATTCGA AGGCTAAAAT
TCTGTCCACT AGACAAATTG CTGACTGATA AATATAAATT TTCAGTTAAT GATGCTCAAG AGTTTTCAGA ATTTCTTCTA
CCACTCTTTG ATTTTGCCCC TGAGAAGCGA CCAACTGCGA GACAGTGCCT GGAACATCCA TGGCTGAAGT GCATGGAGTC
CCCTCCAAAT CAAACTGCTG AGGAAAAAGT GCATGTTGGA ATGAGCAACC TTAAAATCTC ACAGTCCAAG GCATAGTCAC
ATCACATCTT TAAGCCCCTC CTTCCACATG AACTATTGAT TGTGATATTA TTATTTTTTG TTAAACTTCA ATAAGATTCT
TTCTATTGGA TTATTAACTT CAAAGATGTA AATCAGTAAA GAATTTTGTT CCTCCACAGA TATCTGACAC CAGAATTTGC
CTGTATACTG TTCATATATG TTGTAAGTCA TGACATCATA TGACTTTAAT TCAAGTCTTA GCTTTTCCTT TAATCTGAAT
TTGG

>Vigan.10G140800.01
GTCAACTTAT CAATTATAAA TTAATTTATC ACTTATAAAA AAAGTTATAA ATTAGTTTTA CGAGAAATGC TGCAAATAAA
AGTCTATAAT GCATAACATA ACATGTTCTC TAACACTGAC AACAAAACAT ATTCTCTCTG CACTCATGAT GTTACTTATG
CATTTAGCTT TTCATGCCAT TTTCAGCTTT TAGGTCCATC AATTTAAAAA AAAACTACAA ATGATTTTAT TTTTAACCAT
ACCAATCTGC TTCCAATTTA TTCCACTACA TTTTACTGTC ACATTAATTG CCAGCTTCAT AGGTATATGA GATCTTAAAA
GGGAAAAAGA ATGACTGATA AAGTTTAAGA ACTTAGCATC AGTGAATCAA TTCAGCTACA AAGACCACAA CATTAAAATG
GAAAAGTTAA TGAAACACTT TGAATGGAGT AGCTGTTTTT CTGAGACAGT CATGCCATGT GCTAGTGTGA TCCTCCTCAG
TCATATCTAG AGATGCTTTA TGTTAGAGAG GAAGTATAGT AGAGAGGTTT TAAATTAATG CTTGAAAGGT GTTTGAATAA
ATTCATAAAT GAGAAGAATA ATAAGCACAA GATACACTTT CTAAGTAAGT AGCATTACAA AAAGTAAGAA AATACATGAA
TTTTTAGTTC AACATATTGA TGGCACATTA GACTAACAAG TCAAATCAAA TCTACGCAAA ATAAAACCGA ATAAATAAAC
CGAGACTTTT AAGATTTACT ACTAAATTAA CTCATGAAAT TATTAGTTGT AGGAGTGATT AAGCAGGTCA TTACCTAGGA
ACCCTAGAAA AACAAAGAAA GAAACAAACC ATAAAGACAT ACATTAAAAA AAAAAGGTGC ATGATGTTGG AAATGACAGA
AGCCCACAAA GCTGTTTCAG AGTATGATTG CTCCACCTCA CTTGGAAACA GACAGTTGAA ATTATGGAAT CCCGAAAATA
GTCAATGACA GAGGTAAACC AACCAAGGAA AACGAAGGGC ATAGAGGGAA TGATAAAGAC GATGGGCTAT GAAATTGGAG
TAGGAAAAAT GGAAGACCCA CACATCACAT GAAGAAAGAA AGAGAAAAAA GTGGAGGAAT AAGGAATAGG AATTGCATCC
TCCTAAACAA AAGCCTCACA CACCGCAAAT ATAATAACGC TTCATCCTCC TAAACAAAGA CTTCGCGTCC AAGCAATTTC
CGAGTTAAAG AAGATATATC AAAAGGGGAA AGCAGAGCGA ATCACTGGAG AATTTTCAAG AAAGAATCAG ATTTTGAGTT
TCTTTTGGTG AATCTGAATA GATCAGAAGG TGATGTCGTG TTCGTCGTCG TCGGGGTCGG AGGAAGACGA TGAGGGATTC
GACTCTTACC GGAAAGGAGG TTACCACGCC GTCAGAGTCG GCGATCAGTT CGGCGGCGGC AGGTACATAG CGCAGAGGAA
ACTGGGTTGG GGTCAGTTCT CCACCGTCTG GCTTGCTTAC GATACTAAAA CTTCCTCATT TGTTGCTCTC AAGATCCAGA
AAAGTGCCGC CGAGTTTGTT CAGGCTGCCC TTCATGAGAT TGATATTCTT TCATCCATTG CTGACCATGA CCCATCAAAT
TCAAAATTTG TGATTCAATT GATTGACAAC TTTAAGCACA CTGGTCCAAA TGGGCAGCAT CTTTGCATGG TCCTGGGGTT
TCTTGGCGAT AGTTTGCTTC GCTTGATCAA ATATAACCGT TACAAAGGCC TTCCATTGAA TAAAGTTAGA GAGATTTGCA
AATGCGTTTT AATTGGTTTG AACTACTTGC ATACTGATCT TGGTATAATC CACTCTGACC TAAAACCTGA AAACATTCTT
CTATGTTCAA CCATTGATCC TGCCAAAGAC CCTTTAAGAT CTGGACTCTC TCCAATTCTA GAGCGACCTG AGGGAAACAC
AAATGGTGGA GTATCAAGTC TTATTGAGAA AAGGTTGAAA AGGAGAGCAA GGTCGGCAGT TGCTAAGATA TCCGGAAGGA
GAGGGTCAAT GGGAGGAACA GAAGATGTTG CAAAGACCGG TAGAAACATT AATGGGATTG ATGTGAGATG CAAGATAGTA
GATTTTGGAA ATGCTTGTTG GGCTGAGAAG CAGTTTGCAG AAGAAATACA GACAAGACAG TACAGAGCAC CTGAAGTTGT
ACTGATATCT GGCTATTCTT TCCCTGTTGA CATGTGGTCT TTTGCTTGCA TAGCTTTTGA ACTAGCCACT GGAGATATGT
TGTTTACACC AAAGGGTGGA CAAGGTTTTA GTGAGGATGA GGATCACCTC GCCCTGATGA TGGAACTCCT TGGAAAGATG
CCCCGGAAGA TTGCTATTGG TGGAGCTCAG TCCAAGGATT ACTTTGACAG GCATGGGGAT CTAAAAAGGA TTCGAAGGCT
AAAATTCTGT CCACTAGACA AATTGCTGAC TGATAAATAT AAATTTTCAG TTAATGATGC TCAAGAGTTT TCAGAATTTC
TTCTACCACT CTTTGATTTT GCCCCTGAGA AGCGACCAAC TGCGAGACAG TGCCTGGAAC ATCCATGGCT GAAGTGCATG
GAGTCCCCTC CAAATCAAAC TGCTGAGGAA AAAGTGCATG TTGGAATGAG CAACCTTAAA ATCTCACAGT CCAAGGCATA
GTCACATCAC ATCTTTAAGC CCCTCCTTCC ACATGAACTA TTGATTGTGA TATTATTATT TTTTGTTAAA CTTCAATAAG
ATTCTTTCTA TTGGATTATT AACTTCAAAG ATGTAAATCA GTAAAGAATT TTGTTCCTCC ACAGATATCT GACACCAGAA
TTTGCCTGTA TACTGTTCAT ATATGTTGTA AGTCATGACA TCATATGACT TTAATTCAAG TCTTAGCTTT TCCTTTAATC
TGAATTTGG

>Vigan.10G140800.01
ATGTCGTGTT CGTCGTCGTC GGGGTCGGAG GAAGACGATG AGGGATTCGA CTCTTACCGG AAAGGAGGTT ACCACGCCGT
CAGAGTCGGC GATCAGTTCG GCGGCGGCAG GTACATAGCG CAGAGGAAAC TGGGTTGGGG TCAGTTCTCC ACCGTCTGGC
TTGCTTACGA TACTAAAACT TCCTCATTTG TTGCTCTCAA GATCCAGAAA AGTGCCGCCG AGTTTGTTCA GGCTGCCCTT
CATGAGATTG ATATTCTTTC ATCCATTGCT GACCATGACC CATCAAATTC AAAATTTGTG ATTCAATTGA TTGACAACTT
TAAGCACACT GGTCCAAATG GGCAGCATCT TTGCATGGTC CTGGGGTTTC TTGGCGATAG TTTGCTTCGC TTGATCAAAT
ATAACCGTTA CAAAGGCCTT CCATTGAATA AAGTTAGAGA GATTTGCAAA TGCGTTTTAA TTGGTTTGAA CTACTTGCAT
ACTGATCTTG GTATAATCCA CTCTGACCTA AAACCTGAAA ACATTCTTCT ATGTTCAACC ATTGATCCTG CCAAAGACCC
TTTAAGATCT GGACTCTCTC CAATTCTAGA GCGACCTGAG GGAAACACAA ATGGTGGAGT ATCAAGTCTT ATTGAGAAAA
GGTTGAAAAG GAGAGCAAGG TCGGCAGTTG CTAAGATATC CGGAAGGAGA GGGTCAATGG GAGGAACAGA AGATGTTGCA
AAGACCGGTA GAAACATTAA TGGGATTGAT GTGAGATGCA AGATAGTAGA TTTTGGAAAT GCTTGTTGGG CTGAGAAGCA
GTTTGCAGAA GAAATACAGA CAAGACAGTA CAGAGCACCT GAAGTTGTAC TGATATCTGG CTATTCTTTC CCTGTTGACA
TGTGGTCTTT TGCTTGCATA GCTTTTGAAC TAGCCACTGG AGATATGTTG TTTACACCAA AGGGTGGACA AGGTTTTAGT
GAGGATGAGG ATCACCTCGC CCTGATGATG GAACTCCTTG GAAAGATGCC CCGGAAGATT GCTATTGGTG GAGCTCAGTC
CAAGGATTAC TTTGACAGGC ATGGGGATCT AAAAAGGATT CGAAGGCTAA AATTCTGTCC ACTAGACAAA TTGCTGACTG
ATAAATATAA ATTTTCAGTT AATGATGCTC AAGAGTTTTC AGAATTTCTT CTACCACTCT TTGATTTTGC CCCTGAGAAG
CGACCAACTG CGAGACAGTG CCTGGAACAT CCATGGCTGA AGTGCATGGA GTCCCCTCCA AATCAAACTG CTGAGGAAAA
AGTGCATGTT GGAATGAGCA ACCTTAAAAT CTCACAGTCC AAGGCATAG

>Vigan.10G140800.01
MSCSSSSGSE EDDEGFDSYR KGGYHAVRVG DQFGGGRYIA QRKLGWGQFS TVWLAYDTKT SSFVALKIQK SAAEFVQAAL
HEIDILSSIA DHDPSNSKFV IQLIDNFKHT GPNGQHLCMV LGFLGDSLLR LIKYNRYKGL PLNKVREICK CVLIGLNYLH
TDLGIIHSDL KPENILLCST IDPAKDPLRS GLSPILERPE GNTNGGVSSL IEKRLKRRAR SAVAKISGRR GSMGGTEDVA
KTGRNINGID VRCKIVDFGN ACWAEKQFAE EIQTRQYRAP EVVLISGYSF PVDMWSFACI AFELATGDML FTPKGGQGFS
EDEDHLALMM ELLGKMPRKI AIGGAQSKDY FDRHGDLKRI RRLKFCPLDK LLTDKYKFSV NDAQEFSEFL LPLFDFAPEK
RPTARQCLEH PWLKCMESPP NQTAEEKVHV GMSNLKISQS KA*