GBrowse Details

Vigan.10G096900.01

Basic Information:
Name: Vigan.10G096900.01
Multiple alignment
Variant Information
Position: Chr10:11630646..11633056 (+ strand)
Length: 2411
Functional Information:
Description: Similar to axial regulator YABBY 4-like. [XP_004489825.1, Cicer arietinum]
InterPro: YABBY protein (IPR006780)
High mobility group box domain (IPR009071)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,1.00,0.73,0.03,0.00,0.00,2.05
Arabidopsis thaliana homolog: AT1G23420.1
Automatic updates:
Name: NM_001357803 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor YABBY8 (GMYABBY8), mRNA.
PubMed ID: 28866235 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr10:11630646..11631025 (+ strand)
Length: 380
Type: five_prime_UTR
Position: Chr10:11631026..11631106 (+ strand)
Length: 81
Type: CDS
Position: Chr10:11631220..11631354 (+ strand)
Length: 135
Type: CDS
Position: Chr10:11631507..11631630 (+ strand)
Length: 124
Type: CDS
Position: Chr10:11631748..11631796 (+ strand)
Length: 49
Type: CDS
Position: Chr10:11631876..11631951 (+ strand)
Length: 76
Type: CDS
Position: Chr10:11632065..11632172 (+ strand)
Length: 108
Type: CDS
Position: Chr10:11632755..11632835 (+ strand)
Length: 81
Type: CDS
Position: Chr10:11632836..11633056 (+ strand)
Length: 221
Type: three_prime_UTR

>Vigan.10G096900.01 class=Sequence position=Chr10:11630646..11633056 (+ strand)
TGCAAAGTTC CATAGAACTT TGGGCCACTG CAACCCTATG GAGAAGTTTG TCAGTGAGAA ATAATGTTCA TGCAAACAGG
AAAAAATTAT CATAAACCCT CTTCTGAAGG GTGTGGCTGT AATTTGACAC CCTACACAAG GCTTCAAAAT ATTAAACTCT
CCACATCCTT AACGTCAATG TTGGAGTGCT TTCCGGCAAT GAAAACCACC TTAAGTACCC CATTCCACAA ATCATTAAAG
TAAGATGATG ATTGATTTAT GAGTGTCCAT CTTCAACTAT AAATGCTTCC TTGTCCCAAA AGAGCCACAC CTTCATCTCT
CTATCTCTTC TTTCTCTTCC TCTCTGATAT ACACTCACAA ATTCAGACAC ATACACACTA ATGTCAACAC TGAACCATCT
TTTTGATCTT CCTGAACAGA TATGTTACGT ACAATGTGGA TTCTGCACCA CTATATTAAT GGTAATGGAC TCTTTTGTCA
CTTCAACTGC ACCTCTCAAG TTCATGTGGC TGTATTTTCT AACTTCACTT GTTGAGTTCA TTTTCTTTAT GTTTTCAATT
CAACTGAGAT GCAGGTAAGT GTCCCATGCA GCAGTTTGTC AATGGTGGTG ACAGTAAGAT GTGGGCACTG CACAAGCCTC
CTTTCTGTTA ACATGATGAA AGCTTCTTTT GTCCCTTTCC ACCTTTTAGC ATCTCTTAGT CATCTTGAGG TGATAGCTTA
CCTTTCCAAT TCTATGTTTG TTTCCTTTGT GTGTTGCTGT AGTGAATCCA ATGACCCACA TACTCATCTT TAATTATTTG
CATCATTTAT TGGATTTTCT TTTCTGAAAA AACATTTGTG ACTGTCTTCA CTCTTCTCCA GCCAAAAGAA AGTAGTCCAG
AACAAGATGC TAACAAGACT TTGAACAGCC ACAGTGCATC CCTGATGACC TATTCTGATT GTGAGGAAGA GGATCTCATT
CCAATGAGTA ATATTGTGAA TAAACGTACG TAAGATAGTT ACTTCAATAG TAAGATGAGT TATTGAGTTT AAAGCAAGGT
TTTTTGCACT CATACTTCAC TGAAAATTGT TTTTTTTCTT CTTATCCATG GATTGTATGC AGCTCCGGAG AAGAGACAGC
GAACGCCATC AGCTTATAAC TGCTTCATCA AGTAATGATT CAATGAACAA AGTTGTATAG CAGTCATAGT TCAAACTTTG
AATTCTAATG AGAGTACTAG TTTAATGCAG AGAAGAGATT AAAAGGCTAA AGGCTGAGAA CCCTGACATG GCTCACAAAG
AAGCATTTAG TACTGCTGCA AAAAATGTAA GGTCTAATTT CTTAAGCTGC TTTTTAGTTA AACTCGTTTG CAAATTTGGA
AGTCTTATAA AGTTGGTGCT TTTGTTAAGC TTTATCTTGA AAATGTTCGT CATTTTCAGT GGGCCAATTT CCCCCCAACT
CAGTGCAAAG GAGATGATCA AGAGAGCTGT AGCCAGACAG ATCAACTTGT GGATCTTGAC TCCCAAGTGG ACCCTCCTGA
TGCTGAGGTA AAAGCATAAC CGTTTTGAAA AACTCACCAA TTTCTTCATT GAAAACAAAT GCTTCTCTCA TATCTGAAAC
AGATTGCTTT AGCTGATTAA AAGGAGTTAT TAGGAGGAGA TTCTTTGGTA GGACACTGCA TCTATCTTTA GAAATTGCAT
GTCCCTTTCT TTCATATCAC AGGAACAGTA GAAGTAGGCT CCATTCATTC AATACCAAAG ACTTATCCTC ATGGTGGTTG
CCAATTTCTT TGACACTGAT ACATTGAACC GTTTACTAGA ACTTTTTGTA GATTCTCTAT AAATTATGAT CAGTATAAGA
TGTTGATTAA CATGGTATTC TAAAAGTATG CAGAATGCAT TAAAACTTTA GCTAAATGGA GTTATTCTAG ATGGCAATAA
CACTGAAGTA AATAAGACAA CACAGTAACT TTAACAATGG AGTTATTATT CTAATGTGAT GTCTGTAGCC AGTCAATTGC
TGACACTGTC CTTGATATGT GTTAACTTTT CTAGAGTAAT GCAGATGCAG TTCACTCCAC ATGCACCTTT AAGCCTACTT
AATACTTCAA CATTCTATGA AACTTTCAGG TGAACGAAGA AGATGGTCAA GGTTTCCGTG GAAGAAAGGT CCAAAGGAAC
TCCATCTTTG AAAGGACACC ATTTGAGTGA AGAAAGTTCA GTTTTTATGA CATGACAAGA GAGTTGTTTT GTGTCTTAAC
ATTAAGGTTG CCTCTAAATC ATTTTCCAAA TGAAGAAAAG ATGCTCTTTC TTGGTAATGA GAATGAATTA AGTAGGATTA
AGAGCTCACA ATTTGAAACT TTGAGAAGTG CTTAAATTGA TAGTTTTATC TGACAGCAGC ATACTGGTTC CATTAATTAG
TCTTCTTGAC C

>Vigan.10G096900.01
TGCAAAGTTC CATAGAACTT TGGGCCACTG CAACCCTATG GAGAAGTTTG TCAGTGAGAA ATAATGTTCA TGCAAACAGG
AAAAAATTAT CATAAACCCT CTTCTGAAGG GTGTGGCTGT AATTTGACAC CCTACACAAG GCTTCAAAAT ATTAAACTCT
CCACATCCTT AACGTCAATG TTGGAGTGCT TTCCGGCAAT GAAAACCACC TTAAGTACCC CATTCCACAA ATCATTAAAG
TAAGATGATG ATTGATTTAT GAGTGTCCAT CTTCAACTAT AAATGCTTCC TTGTCCCAAA AGAGCCACAC CTTCATCTCT
CTATCTCTTC TTTCTCTTCC TCTCTGATAT ACACTCACAA ATTCAGACAC ATACACACTA ATGTCAACAC TGAACCATCT
TTTTGATCTT CCTGAACAGA TATGTTACGT ACAATGTGGA TTCTGCACCA CTATATTAAT GGTAAGTGTC CCATGCAGCA
GTTTGTCAAT GGTGGTGACA GTAAGATGTG GGCACTGCAC AAGCCTCCTT TCTGTTAACA TGATGAAAGC TTCTTTTGTC
CCTTTCCACC TTTTAGCATC TCTTAGTCAT CTTGAGCCAA AAGAAAGTAG TCCAGAACAA GATGCTAACA AGACTTTGAA
CAGCCACAGT GCATCCCTGA TGACCTATTC TGATTGTGAG GAAGAGGATC TCATTCCAAT GAGTAATATT GTGAATAAAC
CTCCGGAGAA GAGACAGCGA ACGCCATCAG CTTATAACTG CTTCATCAAA GAAGAGATTA AAAGGCTAAA GGCTGAGAAC
CCTGACATGG CTCACAAAGA AGCATTTAGT ACTGCTGCAA AAAATTGGGC CAATTTCCCC CCAACTCAGT GCAAAGGAGA
TGATCAAGAG AGCTGTAGCC AGACAGATCA ACTTGTGGAT CTTGACTCCC AAGTGGACCC TCCTGATGCT GAGGTGAACG
AAGAAGATGG TCAAGGTTTC CGTGGAAGAA AGGTCCAAAG GAACTCCATC TTTGAAAGGA CACCATTTGA GTGAAGAAAG
TTCAGTTTTT ATGACATGAC AAGAGAGTTG TTTTGTGTCT TAACATTAAG GTTGCCTCTA AATCATTTTC CAAATGAAGA
AAAGATGCTC TTTCTTGGTA ATGAGAATGA ATTAAGTAGG ATTAAGAGCT CACAATTTGA AACTTTGAGA AGTGCTTAAA
TTGATAGTTT TATCTGACAG CAGCATACTG GTTCCATTAA TTAGTCTTCT TGACC

>Vigan.10G096900.01
ATGTCAACAC TGAACCATCT TTTTGATCTT CCTGAACAGA TATGTTACGT ACAATGTGGA TTCTGCACCA CTATATTAAT
GGTAAGTGTC CCATGCAGCA GTTTGTCAAT GGTGGTGACA GTAAGATGTG GGCACTGCAC AAGCCTCCTT TCTGTTAACA
TGATGAAAGC TTCTTTTGTC CCTTTCCACC TTTTAGCATC TCTTAGTCAT CTTGAGCCAA AAGAAAGTAG TCCAGAACAA
GATGCTAACA AGACTTTGAA CAGCCACAGT GCATCCCTGA TGACCTATTC TGATTGTGAG GAAGAGGATC TCATTCCAAT
GAGTAATATT GTGAATAAAC CTCCGGAGAA GAGACAGCGA ACGCCATCAG CTTATAACTG CTTCATCAAA GAAGAGATTA
AAAGGCTAAA GGCTGAGAAC CCTGACATGG CTCACAAAGA AGCATTTAGT ACTGCTGCAA AAAATTGGGC CAATTTCCCC
CCAACTCAGT GCAAAGGAGA TGATCAAGAG AGCTGTAGCC AGACAGATCA ACTTGTGGAT CTTGACTCCC AAGTGGACCC
TCCTGATGCT GAGGTGAACG AAGAAGATGG TCAAGGTTTC CGTGGAAGAA AGGTCCAAAG GAACTCCATC TTTGAAAGGA
CACCATTTGA GTGA

>Vigan.10G096900.01
MSTLNHLFDL PEQICYVQCG FCTTILMVSV PCSSLSMVVT VRCGHCTSLL SVNMMKASFV PFHLLASLSH LEPKESSPEQ
DANKTLNSHS ASLMTYSDCE EEDLIPMSNI VNKPPEKRQR TPSAYNCFIK EEIKRLKAEN PDMAHKEAFS TAAKNWANFP
PTQCKGDDQE SCSQTDQLVD LDSQVDPPDA EVNEEDGQGF RGRKVQRNSI FERTPFE*