GBrowse Details

Vigan.10G053500.01

Basic Information:
Name: Vigan.10G053500.01
Multiple alignment
Variant Information
Position: Chr10:5448586..5450812 (+ strand)
Length: 2227
Functional Information:
Description: Similar to Uncharacterized protein. [K4BXT9, Solanum lycopersicum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:273.07,338.40,61.60,37.09,68.51,174.47,63.35,69.65
Automatic updates:
Name: NM_001249587 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305520 (LOC100305520), transcript variant 1, mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001251388 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499684 (LOC100499684), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001352499 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305520 (LOC100305520), transcript variant 2, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:5448586..5449368 (+ strand)
Length: 783
Type: five_prime_UTR
Position: Chr10:5449369..5449749 (+ strand)
Length: 381
Type: CDS
Position: Chr10:5450581..5450667 (+ strand)
Length: 87
Type: CDS
Position: Chr10:5450668..5450812 (+ strand)
Length: 145
Type: three_prime_UTR

>Vigan.10G053500.01 class=Sequence position=Chr10:5448586..5450812 (+ strand)
CCCAGATCTG CTTCTTCCTC ACCCACAGGT ACTTCCATTA GGGTTCCCAT TTTTACTCAA ATTTCTCTTT TTCATTTCTA
TTCTTGATAC TAATTTAGCA TTTTATTTGC GATCTCTTGC TAACTCGTCA ATCTCCCTTA TTCAGATCCA TTCCCAATTT
TCAATTTCGT TTTTATTTTG CTGTATGGAA TCATAGGTTT TAATGTAACC GATTTCTGTT CTGTGATTTA TTTGAATCAA
CGCATGGCGT TGAGCTTGCT CCTGTACCGG GAAACATGAA TGATAATTGT GGAACGGAGG GTCGTTACTC TGTTTCCACC
GAAACAATTA GAATTATGTG AACATGGAAC ATTTGATTTT TATTCTGTTT TGCAAGTATG TGCTTGTTGT TTTGTGCATT
GACTCCATGA TTGGATTGGA TAAATATATG TGTGTATATA TATATTTTAA ATTATTTTAG TCCAGGTTTT AATCTGTTGT
CTGGCGGCCA CCCCAAAAGC CTTGATGTAG TGCCCAAATT GTGATTTTGA ATTGGTTTTA AGGCCTAAAG TTGAATGAGA
TGTAAGATCA ATTGGCCGGA AGAAAAATGG TTGTAAAACA GAAATTTGGC GTCAATAAAG TCTGATCAGT TGTTTGTTTT
CAAATTTCAA CATTGTCAAT CTATGTGCTT TTTGATTTTC TGGGTGTGCT TTTGTACGAA GGAAATGGAA TAAAATAAGT
ACTAGGTGAT TGAATACTAG TGAAAATTCA TTTGATAAAT GTTTACTGGG TGGTTGAATG TGAATGTGGT ATGAATATAT
ATTTGTTGGT TACCGCGTAT TATTCACCAT TTATTTTCTT GTTGTGTTTT TCCTAACTTC TGATCCGATC TTTGTCTGTT
TATTTGAATG CAGAGACTAC AGTTTAGGTT TAAAAGATCA GTTGAATAAC ATGGGTCGTG GAGTTAGCTA TGGTGGTGGT
CAAAGTTCAT TAGGCTATCT TTTTGGCAGT GGAGAGGCTC CAGCTCCAAA ACCTGCAACA AATAACGCCC AACCTGAAGT
GCAGGCTGTA AATGATGTGC CTCCTTCAAA ACCGGTTGAG GCTCCTAAAT CAATAGACCC TAACAAGCCT GCTGGTATCA
ACAGTCACTC TACTGAAGGC CAGAACACTG GCAACTTCAT CACGGTAATA CTTGGTCCTC TAACTTATAT TTAGTTCTCT
TTTTTCCAAG TGTCAGTCAG TATTATAGTT TAACTCTGAA AAGAACTAAC TATACAAAAA GCTTAAACTG TTTAAATGAA
CACACAGTAA TGGTATTATA TTATATCTCT GACACCTGAA CTAATTATGA AAATTATGAT GCCCTAAGAT GGATTAAAAC
TGCTAAACTG CACACTTACA AAATATGTTG GTTGTCCCTA ATGTGTTTTA ATCGTCTTAT ATGTATTGGT ACTATAATAA
TTTTGTTACC GTGTGTTTAT ATAGATGATG ATTTAATTTG TCACCTAGCA TGTTCGTAAT TCTGAACAGT TAGGTCGCAA
TATGTCAATT TAGTTAGCTG TACTAATAAT ATCTGAACAA GTGTGGAAAC AATCAAATAT CTGAATGATA AATTTTTATT
TGGCTTTGAT TCTTATTGCT GTATACATAA GAATCAGTTG ATTCTTATGC TTTTTCAATG AGGATTAATC TACTCAAATG
AGGATAAATC TTCATGTATT TTACCTTGAA TATCAGCACT GACTGTTATT TATGAAATAT GTACTGCTCA GAATACTCGG
TGTTGACTTC CTATCTCTTT ATTTTAATCT AGTCCCACGT GTGCTTATTT GAACTGTCAT GGCAAATTCA TTACAATACC
CCTCCTCATT GTACTAAAGT GACGATGTCT TGCAAAATGA AACTACATTA AAATGTTACT TTCCATGACA TTATGGGGCC
CCTGCTAAGA AGACTCTGTT ATGTTTGGAA CTCATTTGGA CTGGTGTCTG AATTTCTTTT CCAATTCATC TGCAGGACCG
ACCCTCAACC AAGGTCCATG CTGCCCCTGG TGGTGGTTCT TCTCTGGGTT ATCTCTTTGG TGGACCTGGA GAGGGAAAAT
GATACATTGG TTCGAATCAT AATGAACGAT TTATTTTGAA ATTCAGGTCG TGGAAACATA ATGGAAGATA TGGTGTATTA
TAGGTTATGG GTGCTGGGAT AAGTGGGTCA AGAGTGCTAT ATTTTGGATG TGCTAAACAT CTATTAC

>Vigan.10G053500.01
CCCAGATCTG CTTCTTCCTC ACCCACAGGT ACTTCCATTA GGGTTCCCAT TTTTACTCAA ATTTCTCTTT TTCATTTCTA
TTCTTGATAC TAATTTAGCA TTTTATTTGC GATCTCTTGC TAACTCGTCA ATCTCCCTTA TTCAGATCCA TTCCCAATTT
TCAATTTCGT TTTTATTTTG CTGTATGGAA TCATAGGTTT TAATGTAACC GATTTCTGTT CTGTGATTTA TTTGAATCAA
CGCATGGCGT TGAGCTTGCT CCTGTACCGG GAAACATGAA TGATAATTGT GGAACGGAGG GTCGTTACTC TGTTTCCACC
GAAACAATTA GAATTATGTG AACATGGAAC ATTTGATTTT TATTCTGTTT TGCAAGTATG TGCTTGTTGT TTTGTGCATT
GACTCCATGA TTGGATTGGA TAAATATATG TGTGTATATA TATATTTTAA ATTATTTTAG TCCAGGTTTT AATCTGTTGT
CTGGCGGCCA CCCCAAAAGC CTTGATGTAG TGCCCAAATT GTGATTTTGA ATTGGTTTTA AGGCCTAAAG TTGAATGAGA
TGTAAGATCA ATTGGCCGGA AGAAAAATGG TTGTAAAACA GAAATTTGGC GTCAATAAAG TCTGATCAGT TGTTTGTTTT
CAAATTTCAA CATTGTCAAT CTATGTGCTT TTTGATTTTC TGGGTGTGCT TTTGTACGAA GGAAATGGAA TAAAATAAGT
ACTAGGTGAT TGAATACTAG TGAAAATTCA TTTGATAAAT GTTTACTGGG TGGTTGAATG TGAATGTGGT ATGAATATAT
ATTTGTTGGT TACCGCGTAT TATTCACCAT TTATTTTCTT GTTGTGTTTT TCCTAACTTC TGATCCGATC TTTGTCTGTT
TATTTGAATG CAGAGACTAC AGTTTAGGTT TAAAAGATCA GTTGAATAAC ATGGGTCGTG GAGTTAGCTA TGGTGGTGGT
CAAAGTTCAT TAGGCTATCT TTTTGGCAGT GGAGAGGCTC CAGCTCCAAA ACCTGCAACA AATAACGCCC AACCTGAAGT
GCAGGCTGTA AATGATGTGC CTCCTTCAAA ACCGGTTGAG GCTCCTAAAT CAATAGACCC TAACAAGCCT GCTGGTATCA
ACAGTCACTC TACTGAAGGC CAGAACACTG GCAACTTCAT CACGGACCGA CCCTCAACCA AGGTCCATGC TGCCCCTGGT
GGTGGTTCTT CTCTGGGTTA TCTCTTTGGT GGACCTGGAG AGGGAAAATG ATACATTGGT TCGAATCATA ATGAACGATT
TATTTTGAAA TTCAGGTCGT GGAAACATAA TGGAAGATAT GGTGTATTAT AGGTTATGGG TGCTGGGATA AGTGGGTCAA
GAGTGCTATA TTTTGGATGT GCTAAACATC TATTAC

>Vigan.10G053500.01
ATGTGGTATG AATATATATT TGTTGGTTAC CGCGTATTAT TCACCATTTA TTTTCTTGTT GTGTTTTTCC TAACTTCTGA
TCCGATCTTT GTCTGTTTAT TTGAATGCAG AGACTACAGT TTAGGTTTAA AAGATCAGTT GAATAACATG GGTCGTGGAG
TTAGCTATGG TGGTGGTCAA AGTTCATTAG GCTATCTTTT TGGCAGTGGA GAGGCTCCAG CTCCAAAACC TGCAACAAAT
AACGCCCAAC CTGAAGTGCA GGCTGTAAAT GATGTGCCTC CTTCAAAACC GGTTGAGGCT CCTAAATCAA TAGACCCTAA
CAAGCCTGCT GGTATCAACA GTCACTCTAC TGAAGGCCAG AACACTGGCA ACTTCATCAC GGACCGACCC TCAACCAAGG
TCCATGCTGC CCCTGGTGGT GGTTCTTCTC TGGGTTATCT CTTTGGTGGA CCTGGAGAGG GAAAATGA

>Vigan.10G053500.01
MWYEYIFVGY RVLFTIYFLV VFFLTSDPIF VCLFECRDYS LGLKDQLNNM GRGVSYGGGQ SSLGYLFGSG EAPAPKPATN
NAQPEVQAVN DVPPSKPVEA PKSIDPNKPA GINSHSTEGQ NTGNFITDRP STKVHAAPGG GSSLGYLFGG PGEGK*