GBrowse Details

Vigan.10G050800.01

Basic Information:
Name: Vigan.10G050800.01
Multiple alignment
Variant Information
Position: Chr10:5096239..5099808 (+ strand)
Length: 3570
Functional Information:
Description: Similar to Uncharacterized protein. [E9KNA5, Glycine max]
GO: Molecular Function: protein domain specific binding (GO:0019904)
InterPro: 14-3-3 protein (IPR000308)
14-3-3 protein, conserved site (IPR023409)
14-3-3 domain (IPR023410)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.75,5.44,24.22,3.70,24.86,62.99,40.13,16.80
Automatic updates:
Name: NM_001251478 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 14-3-3 protein SGF14f (SGF14f), mRNA.
PubMed ID: 21120521 NCBI(pubmed)
Status: Known Variant
Name: NM_001251494 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 14-3-3 protein SGF14e (SGF14e), mRNA.
PubMed ID: 21120521 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr10:5096239..5096351 (+ strand)
Length: 113
Type: five_prime_UTR
Position: Chr10:5096352..5096424 (+ strand)
Length: 73
Type: CDS
Position: Chr10:5097496..5097802 (+ strand)
Length: 307
Type: CDS
Position: Chr10:5098172..5098259 (+ strand)
Length: 88
Type: CDS
Position: Chr10:5098369..5098478 (+ strand)
Length: 110
Type: CDS
Position: Chr10:5098567..5098715 (+ strand)
Length: 149
Type: CDS
Position: Chr10:5099098..5099144 (+ strand)
Length: 47
Type: CDS
Position: Chr10:5099428..5099433 (+ strand)
Length: 6
Type: CDS
Position: Chr10:5099434..5099808 (+ strand)
Length: 375
Type: three_prime_UTR

>Vigan.10G050800.01 class=Sequence position=Chr10:5096239..5099808 (+ strand)
GCATCACCCC ACATTTCCTT CTTCTTCTTC TCCTTATTCT TCATCTTCAT CAACTTCTAC GCCCTTTTTC TGTGTTTGTC
CTTCTCCTAG TTTTCTGATC TCTCTCTCCC ACCATGGCTG CCGAGAAAGA GAGAGACACA CAGGTTTACT TGGCCAAACT
TGCTGAGCAG GCCGAGAGAT ACGAAGGTCT GTGCGCCCTT TCCATTTAAT CTGAGATTTT GTTTTTCCTT ATTATTTTGA
CTTTGATTTG GATTCGCTGT TCTTTTTTGT GGTTTCATGA TGGGGTTTGT GATTTGATGC TGCCATTGGG GTGGATCTGT
TTTTTGGGAG CGGTTTCGTT GTTCTGTTGG GTGGGTAATG TGGATGGAGA GTCGAAAGAT TTGATTTTGA GATGTGGGTT
TTCGGTTATT TTATGGACTA GCTTTTGGGT TAGATGGTTT TCCCTGTGAA ACCCCACCTT CTTTTGTGGA TTTGAGGCTG
GCATTGGTTC TTGGTTTTTG TTTTCAGAAA TTGTCTTTGG TTTTTAACAT GCAACTGAAT AAGGTTACTC AGATAGTTGG
TGGAGGGTGG TCTAAGGCAT ACAAAAGTGT GTAGAATTGA ATGAGAGGTT GAATGAGATG AATGCATAAG AAAAACTAGA
GCTAACTTCT CCCAAATTTG TTTTGTTTTT TAAAGCACCT ATTTTGAAAA TAATTTGCAT AAAGTAATAA CATTTTGGAT
GAATCACTGA TTGGTGTGTG AAATTATTTT GGAAAATAGA TTTTAAAATC AAAAGGTGGG AAGGGAATCA AATGGGCCCT
AATTTTCAAA ACTGTAATGG GTTACCAAAT GTTGTGATGG GGCCAATAAG GTAAGACCTT CCAACTCAGA ATAGAATGCT
GTCCTTTTCT ATTTGTACTT GAATCTGTCC ACCTATACTT GATAAATTCT ATTTGCATGG CTACCCTTTT GATGAAAAGA
GGCGAATACG GATCAATTTG TTTCTCTTAC CTTTAGAGTG TCATCTTCTT GCCTGATTAG GTGAAGATTA ATCTGTTTCT
AATTTTATTT AATTAATTGT CTTATTTTGG ACCCGGATAG ACAAAGTCTG ATTTATGCTC AGAACCTACA ATATGTGAGC
GTAATTGTTG TTGCATAGAG CATAGTGCAT GCCAGTGATC TGTACTTTGA ATTTTCTAAA TACACAGAGG TAGTATTTTG
ATCACTGTTA TAGTTTCTGT AATAATATCC TTCTGAAACT TAATACTTAT TATGCAGAAA TGGTTGAGTG TATGAAGAAA
GTTGCAAAAC TTGATCTTGA TCTAACTGTG GAAGAAAGGA ACCTCCTCTC AGTGGGATAC AAAAATGTCA TTGGTGCACG
GAGGGCCTCC TGGCGCATCA TGTCCTCAAT TGAGCAGAAG GAAGAGGCTA AGGGTAATGA GCACAATGTC AAACTGATCA
AGGGCTACCG CCAAAAAGTT GAGGAGGAGC TCTCCAAAAT TTGTGGTGAC ATTCTGACTA TTATAGACAA GCACCTGGTT
CCTTCTTCTG GATCAGCAGA AGCTAGTGTT TTCTACTATA AGATGTGAGT TATGCTGCTA CACTTCCTTT GTTACGCACT
TGATTAATTC AATTCCTTTC CCAGTTAAAA AAATTATCTT TATCTCCATA TTCTTTTTTG TATTTTCTTC CCTTGAGTAT
TTATAATTGT CTTTTCTTAT TAAAGTCTAA AAGAGGATAC CAAGACTAGT CTGGGAGGTG TGGAATCTGT ATGAATATTT
TGATGACCTA TTTTTTGTTC CTGATGCAAT GCAATGATTG GTAGAGAACC CTTACCTTCA GTCAATGTTG GATATGTAGG
GACTCTAATG CTATGAATGA GTCATTGTAT TTATTTGTTT ACCTAATATT TTTCTTTGAT ATTCCTGATT TCCTTATTCT
GTCTTTGGTT CAGGAAAGGT GATTATTTCC GGTACCTTGC TGAGTTCAAG ACTGACCAAG AAAGAAAAGA TGCAGCTGAG
CAGTCACTTA AAGGATATGA GGTCATTTTT TATGTCATGT ATTTCAGCAC TGAACTACTT CATAAATTAA TTATTGTTTA
TATTATACAT TATACTTTCA TTTGATTTTC AAAAATGTTT TAATTATTAG GCTGCTTCAG CCACTGCAAA CACTGATCTT
CCATCAACAC ATCCAATTCG TCTTGGACTT GCCCTCAATT TCTCAGTCTT TTACTATGAG ATAATGAACT CTCCTGAAAG
GTATGTTATT GGTTCTCTTA TCTGCATGGA TCCATTGAAT TGCATTTGTT GCTAGCTCTT GTCTGAATGT CATTACTACA
ACTTACAGGG CCTGCCATTT GGCTAAACAA GCTTTTGATG AGGCAATTGC GGAATTGGAC ACCCTGAGTG AAGAGTCATA
CAAGGACAGC ACCTTGATCA TGCAGCTGTT GAGAGACAAC CTGACACTCT GGACCTCTGA TTTGCCAGAG GATGGAGGTA
TGGAAATGAT TAAAACTTGA TATAAGATGC ATTTGACTTT TGCCTAGGGA AAGCAATAAA TATTGTACCG TATGTTGCTC
AATAATGATG TCTGAGACAA AAGTGGTTGA TGTACACTTG TACAATATCA TTGCAACAGT ATCTTCCACT CACTCTGTTC
CCCTCTCAAA TTTTGTGAAA AAAAAAGTAA ATTAGGATGA ATAGAAAGAA AAATAAAACT GCATGCCCTT GGAGAGATCA
TCATGAAGGT CATAAGTCAT TGTTTCAAGA GTGGTGTCTT CAACTGAGTC ACTCCTAGTT AACAGCATGA TCATGTTTCC
TTTTATTTGT TTGATACTAA CATACTTGGA ACTACTAAAA AGCTAATGCT ATTATGCAGG TGAGGACAAC ATAAAAGCTG
AAGAAGTCAA ACCTACCGAG CCTGAGGTTT GTGCATAATA AGTTGTTACT TTACATGATT TTATTGTTGA ATGTGTAGTT
AATTCTTGAC AATTCATAAT GTAGAAAACG AGCAATTCCT TATATATGAG ACCAACTAAG GGTCTGTTTA GTTTGAGACA
TTTTTCTCAG GCTTTTTCAA ATAATTATAA AATAAAATCT CAGGTGGCTG TTTCAAAGAT TTGTGCTAGA ATAATTTTTC
TGAAATCAAA CATGTCTGTA TATACTTTAG TCACTGTTTA GGTTCCTTGA CATTCTTCTA CTTGTGCAGC ATTGACCATG
ATTCGATAGT CAGATGTCTA AGGTGTCAAC AAGGGCGTTT TTCAGCTTTT CTTGCAATGG ATTTGGACCA GACAACAGGG
CCATTTTCTC CGTTACCAAA GCCAGAAGAT CTGTGCCTTT CATTTATTTA CTTCAAACCT TTTCTTTTTG TTGTCTTATC
TGTTTTAAGT AAAGTGATCA GTTGAAGCAA ATGAACAATT TAAATTTACC CTTATAAGCA TCTCAATCCT TCATTTTGTT
TGCATTTACT TTTCTTAAGA TGATTATGTT TCCTATAGGC TCCTAGTCAG TAATCATCTA TACAAAAAAC AAAACGCAAT
GGTTTAGAAT GAATAGTCTG TCATAAAAAC TAATTGTGGA TTAAAAAGGC 

>Vigan.10G050800.01
GCATCACCCC ACATTTCCTT CTTCTTCTTC TCCTTATTCT TCATCTTCAT CAACTTCTAC GCCCTTTTTC TGTGTTTGTC
CTTCTCCTAG TTTTCTGATC TCTCTCTCCC ACCATGGCTG CCGAGAAAGA GAGAGACACA CAGGTTTACT TGGCCAAACT
TGCTGAGCAG GCCGAGAGAT ACGAAGAAAT GGTTGAGTGT ATGAAGAAAG TTGCAAAACT TGATCTTGAT CTAACTGTGG
AAGAAAGGAA CCTCCTCTCA GTGGGATACA AAAATGTCAT TGGTGCACGG AGGGCCTCCT GGCGCATCAT GTCCTCAATT
GAGCAGAAGG AAGAGGCTAA GGGTAATGAG CACAATGTCA AACTGATCAA GGGCTACCGC CAAAAAGTTG AGGAGGAGCT
CTCCAAAATT TGTGGTGACA TTCTGACTAT TATAGACAAG CACCTGGTTC CTTCTTCTGG ATCAGCAGAA GCTAGTGTTT
TCTACTATAA GATGAAAGGT GATTATTTCC GGTACCTTGC TGAGTTCAAG ACTGACCAAG AAAGAAAAGA TGCAGCTGAG
CAGTCACTTA AAGGATATGA GGCTGCTTCA GCCACTGCAA ACACTGATCT TCCATCAACA CATCCAATTC GTCTTGGACT
TGCCCTCAAT TTCTCAGTCT TTTACTATGA GATAATGAAC TCTCCTGAAA GGGCCTGCCA TTTGGCTAAA CAAGCTTTTG
ATGAGGCAAT TGCGGAATTG GACACCCTGA GTGAAGAGTC ATACAAGGAC AGCACCTTGA TCATGCAGCT GTTGAGAGAC
AACCTGACAC TCTGGACCTC TGATTTGCCA GAGGATGGAG GTGAGGACAA CATAAAAGCT GAAGAAGTCA AACCTACCGA
GCCTGAGCAT TGACCATGAT TCGATAGTCA GATGTCTAAG GTGTCAACAA GGGCGTTTTT CAGCTTTTCT TGCAATGGAT
TTGGACCAGA CAACAGGGCC ATTTTCTCCG TTACCAAAGC CAGAAGATCT GTGCCTTTCA TTTATTTACT TCAAACCTTT
TCTTTTTGTT GTCTTATCTG TTTTAAGTAA AGTGATCAGT TGAAGCAAAT GAACAATTTA AATTTACCCT TATAAGCATC
TCAATCCTTC ATTTTGTTTG CATTTACTTT TCTTAAGATG ATTATGTTTC CTATAGGCTC CTAGTCAGTA ATCATCTATA
CAAAAAACAA AACGCAATGG TTTAGAATGA ATAGTCTGTC ATAAAAACTA ATTGTGGATT AAAAAGGC

>Vigan.10G050800.01
ATGGCTGCCG AGAAAGAGAG AGACACACAG GTTTACTTGG CCAAACTTGC TGAGCAGGCC GAGAGATACG AAGAAATGGT
TGAGTGTATG AAGAAAGTTG CAAAACTTGA TCTTGATCTA ACTGTGGAAG AAAGGAACCT CCTCTCAGTG GGATACAAAA
ATGTCATTGG TGCACGGAGG GCCTCCTGGC GCATCATGTC CTCAATTGAG CAGAAGGAAG AGGCTAAGGG TAATGAGCAC
AATGTCAAAC TGATCAAGGG CTACCGCCAA AAAGTTGAGG AGGAGCTCTC CAAAATTTGT GGTGACATTC TGACTATTAT
AGACAAGCAC CTGGTTCCTT CTTCTGGATC AGCAGAAGCT AGTGTTTTCT ACTATAAGAT GAAAGGTGAT TATTTCCGGT
ACCTTGCTGA GTTCAAGACT GACCAAGAAA GAAAAGATGC AGCTGAGCAG TCACTTAAAG GATATGAGGC TGCTTCAGCC
ACTGCAAACA CTGATCTTCC ATCAACACAT CCAATTCGTC TTGGACTTGC CCTCAATTTC TCAGTCTTTT ACTATGAGAT
AATGAACTCT CCTGAAAGGG CCTGCCATTT GGCTAAACAA GCTTTTGATG AGGCAATTGC GGAATTGGAC ACCCTGAGTG
AAGAGTCATA CAAGGACAGC ACCTTGATCA TGCAGCTGTT GAGAGACAAC CTGACACTCT GGACCTCTGA TTTGCCAGAG
GATGGAGGTG AGGACAACAT AAAAGCTGAA GAAGTCAAAC CTACCGAGCC TGAGCATTGA 

>Vigan.10G050800.01
MAAEKERDTQ VYLAKLAEQA ERYEEMVECM KKVAKLDLDL TVEERNLLSV GYKNVIGARR ASWRIMSSIE QKEEAKGNEH
NVKLIKGYRQ KVEEELSKIC GDILTIIDKH LVPSSGSAEA SVFYYKMKGD YFRYLAEFKT DQERKDAAEQ SLKGYEAASA
TANTDLPSTH PIRLGLALNF SVFYYEIMNS PERACHLAKQ AFDEAIAELD TLSEESYKDS TLIMQLLRDN LTLWTSDLPE
DGGEDNIKAE EVKPTEPEH*