GBrowse Details

Vigan.10G049300.01

Basic Information:
Name: Vigan.10G049300.01
Multiple alignment
Variant Information
Position: Chr10:4922070..4926832 (- strand)
Length: 4763
Functional Information:
Description: Similar to Uncharacterized protein. [K7K7S2, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Leucine-rich repeat (IPR001611)
Leucine-rich repeat, typical subtype (IPR003591)
Leucine rich repeat 4 (IPR025875)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:52.86,31.95,43.66,34.19,37.99,28.90,41.09,52.44
Arabidopsis thaliana homolog: AT5G61240.2
Automatic updates:
Name: NM_001252762 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable leucine-rich repeat receptor-like protein kinase At1g35710-like (LOC100802317), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:4922070..4922358 (- strand)
Length: 289
Type: three_prime_UTR
Position: Chr10:4922359..4922449 (- strand)
Length: 91
Type: CDS
Position: Chr10:4922525..4922596 (- strand)
Length: 72
Type: CDS
Position: Chr10:4924311..4924382 (- strand)
Length: 72
Type: CDS
Position: Chr10:4924559..4924630 (- strand)
Length: 72
Type: CDS
Position: Chr10:4924725..4924805 (- strand)
Length: 81
Type: CDS
Position: Chr10:4924899..4925042 (- strand)
Length: 144
Type: CDS
Position: Chr10:4925149..4925220 (- strand)
Length: 72
Type: CDS
Position: Chr10:4925452..4925523 (- strand)
Length: 72
Type: CDS
Position: Chr10:4925924..4925995 (- strand)
Length: 72
Type: CDS
Position: Chr10:4926155..4926302 (- strand)
Length: 148
Type: CDS
Position: Chr10:4926445..4926634 (- strand)
Length: 190
Type: CDS
Position: Chr10:4926635..4926832 (- strand)
Length: 198
Type: five_prime_UTR

>Vigan.10G049300.01 class=Sequence position=Chr10:4922070..4926832 (- strand)
TAAAAAACAA AAGAGAGAAA AGAAAACCAT CAAAACCTCA GTGCCGACGC CAAGGAGTGT GTTGTTGGAT GTTCAGATTC
CAACATGATA CCGCGTTCGC TCACTCTCAA CTTCAATTGA TCAATCACCA AAATCAAATT CCTACACCAC ACCTTCTCTC
TCCTTTGCAA AATCTGAATC AACAACATAC AGCAAAACAT GTCACTCAAC CACACCAACA ACACTTCAGA TCTACGATTC
CAATCCCACA ACACAAAAAA TAAACAAAAA CCGATTTCTC CAAGCGCCCT CAAAATGGCG CCTTCACCCT TCACTTCATT
ACCCTTCGTC TTCTTTACCC TTCTGTCAAT TCTCCACCTT TCGCACTGCA AGACCCTAAA GCGTGACGGT AACGTTAGCT
ACTTAACTCA GTCCCTTTAC CCATGTCGTT TTCTCTCAAC TTTTCTCCAA TTCGGTTAAT TGGGTTGCCG AGTTTTGCTT
TTTCCCGTCA TGGGTCGGAG TCGTTTATGT CTTCCTCGAA TTTTTTGCAG TTAAGGCTTT GAACGAGATC AAGGCTTCTC
TTGGGTGGAG AGTGGTGTAT GCGTGGGTCG GTGATGACCC TTGTGGTGAT GGGGATCTTC CTCCTTGGTC TGGTGTCACG
TGTTCCACTG TCGGTGATTA TCGTGTCGTG ACCGAGCTGT GAGCATCATT TATCTTTTCA ATTGATTTAG AAAAATGCAA
AAAATGTCCC TTTTTTTTGG AATTGTTGAG ATAAAGGTTT TTTATTTTTA AGTTCAGTTG TTGCTGACGA GATTTGAGGT
TGTAAAGTTG GTGTAATTGG GATTTGGTAT TTTTCAGTGA GGTGTATGCG GTGTCGATTG TCGGACCTTT TCCTACTGCT
GTAACCAGCT TACTGGATCT TACACGGCTG TAAGTTTTTA TTTTTTTCAT TAATCTATGT TTCCTTTAAT TTTGATCCTT
TAACGGGTTG AGAAACATAT GGTGTTGATT AACGCCTATG GTTGTGTTGG AGTTGAATGT TTGAAAGCCA AATATTGTGT
TCTGTTTGTA TGTTTTTCAT ATTTGTTTGC AGGATAGCGA GGAGTTTATT TGGTTGGTGT TTTTTAATTT GATGCAAAAT
AATAAAGAAA TTAATTATAA ATGGTTGATT GAGATTTATG GGTTGAGATA ATGCATTTGC AGTTCATCTG CGTTTTGTTT
TGCTTTGTTG CTTTTAATTA CAATTACTAT ATGTGTATCA TTGAAATGCT TCCATTTTGA TTCTCCCTTT GAAATTCTTA
TGAGTTGATG CACTGTGTAC TTATGGCAGT GATCTTCACA ATAACAAGTT GACAGGGCCT ATTCCTCCTC AAATTGGACG
GTTGAGGCGT CTTAAAATAC TGTATGAATT TTCTGATCCC TGTTCACTTT TTCTTTCTCT CTGCATTTTT TGTTCTGATA
CTTATGTTTG ACGCAGTACA ATTATTTATA CTAGATTTTT ATGTTAACAA CTAATGTTTA TTTAGGAAGA TTTTTCTTTT
TACTGGGTTT TTATTTAAGC AGTGGTTGAT CATCTATAAC CATTATTCAA AGATGTTATA TTGATTCATT TTTTACCTCT
CTTTCCTTCC AGAAATTTGA GGTGGAACAA ACTACAGGAT GCAATTCCTC CAGAAATTGG TCAGCTCAAA AGTTTAACAC
ATCTGTGAGT AACTCTTACC TTCCTAATGT CTTTGGGCTT GCTTGTCCCT TTTTCATCGT TGCTTTTATT TTATTTAGAA
TTGTAACTAT AATGTCATAT CTTTTTTCAG GTACCTAAGC TTCAACAATT TTAAGGGAGA AATTCCCAAG GAGCTAGCAA
ATCTGCCTGA CCTTCGCTAT CTTCATCTCC ATGAAAACCG TTTAACCGGA AGAATACCAC CAGAATTGGG CACTCTACAA
AATCTTCGGC ACTTGTAATA ATCAAAGCAT TTTAATTTAA TAATATTCTA GTGCAGAGTA CACTATTTAT CGTACTTAAT
GTTTCCTAAT ACTGTTATAC TTTATAGGGA TGCTGGTAAC AATCATTTGG TGGGTACCTT AAGGGAACTC ATTCGTATTG
AAGGTTGCTT TCCAGCCCTA CGCAATCTGT AAGTTAATGC TGGTGAATTA GTTTCCTCAA TATATTATCA TTTGGTTTTA
AATAATATTG TCTAAATTTT AACGTTTTTT TTCTGGAACC AGATATCTAA ACAATAATTA TTTTACTGGA GGAGTACCTG
CACAACTTGC TAACTTAACC AGTCTTGAAA TATTGTGAGT GCTGCTTTTC CTTTTATCCT TTAATACCAC TTTTCATTCT
TCCTCCTCCT TTGAGCATGT GTGTGAGAGA GAGAGAGACA GTATTGCTTT ACAATAATTC TACCCTTTTT GCAAGATCTG
TCTCTTATTT ATGGAATTTC CATAACATGA TTATTGTATG TTGGAGGCAG GTACCTATCC TACAACAAAA TGTCAGGAGT
TATACCATCT AGCATTGCTC ATATTCCTAA ATTGACATAC TTGTAAGTTT GTCTTTCTCT TGTTGATTGG AATCTTCATT
AGAAGTGTTG TGCATTGAAT AAGGTCTAAG TTGTTTTTGA TTTTTCATGA AACTCTTGAT TTCGTATTTT GTTGCTACTT
ATATATCTTT TAATTTTATT TTATAATATA CTTATTCTTT AATGGGGAAG ATTCCTCACC TTTTTTGGAC AGATGTTAAT
GGAGAAGCTA GTCTTGGAAT ACCTTATTAG ATTTAGTAGT TGAAATATTG TTATTTTGAT TGGTGACTTT TAGGAGGTAG
TGGATGATAT GATTCAGAGA AAGATTAACA CTATGCGTAT TCAAGAAACT AAATGGGTTG GAGAAAAAGG TACAGATCCA
GACACTGCAC GAGTTAAACT TTGGTGTACA CTAGAAAGTT GGAGGTGATG ACAAAATTGC TACTACTGGT GGAAAGTGGT
GGAAGTAAAA AGAATCGGGA CTAAATTTTA CCTTAAAATT TACATTGGAG ACTGATAATA TTATTAATTT TTGCTTATGC
GCCACAAGTA GGATCATAAC CACTTTTAAA AGAGAAATTT TGTAAATGTT TTGGATTAAA GTTTTCCTCA AGAGGAAAAG
ATTCTCGTAG GCAGGGATTT AAATAGATAT GTTGTTAATT GGGCAAGATA TGTTGATGAA TTAAAAGGTT TTGGACCAAG
TGATAAGAAA TCTTGGTGGT GGAACATAAG TGTTCGAGGA AAGAAATAAA AGAGTGTCTT AAGGATTTAC ACGAGTCCAA
TAATACTAAA AATTGGGCAA GATTTTGGAA ACATAGAAAT GAGGTAGTGA AAGTTGTGAA TGAGGCACTA TGCAAAGCGG
TTGCAGAGTT TTAGCTTGAT ATTGGGACAA AGAATAAATA AAGAGCATAT ATATAATAAG CTTGCCAGAA GTAGGTAAAA
GAAATCAAGA ATTTTGGACC AAGATTTATT AAAGATCAAG AGAATTTCTA AGTTACTGCT ACAGATCACG ATATCAAAGA
AATATGGGAT AGCTATGTCC AAAGTTTTTC AATGCTAGAT AAGGATTTAT ATTTAGCATG GAAGAATTAG AAAATTAACT
GTTCGAACAA ATTTGACTTA TTGTGTAGAA TTTTAGTTAT TGAAGTAAAA GAAGCCTGTA AGAAGATGGA TAATAGTAAA
GTTTATTAGT TTATATAATT TGGTTGTTCA CTGAGTTCAA GAGCATCATG TGATCTACAT AGCTAACTTC ACCTGCTGGG
ATAAAGTTAT TGTTGCTGTT CTATTGGTTT ACCGACAAAA AGAGTTTTTT GTATTGTAAC CGGATATATC ACAAAATTCA
ATGGCTGGGC TATTTTTAAA CATACGAGTA TATAAGTCAT ATAGAAATTG ATGTGATTGT ATGTTTACCC TTTTTGATTT
TGAGACTTAT AAACCTTGTC CTTTAGGCAT TGAGTTCTCT AAATGCAATT TAAGAACTAG AAACACATGC TTTACTTGCT
TTCATTTATT TATTCTCGCT GGAAAACTAT GGTCTTTAAT ATGCTGCTGT GAGCTTCAAT ACTACAAACA CTTGGCTCAG
AATTCTAATT TTCTGTAGAA AATGGAAATT TGAACTTTCC TTTCCTTTCC ATTTTGTCAG TAAGATTGAT AAATATGTTC
TCAGATACTT CCATGAAACT CAATTGTCAT CTTTGTGAAG TTTTTAACAA TTTCAAGATT TTTTTCTCTA TTTCAGGTAC
TTGGATCACA ATCAGTTTTC AGGGAGAATT CCCGATCCCT TTTATAAGCA TCTATTTTTG AAAGAAATGT GAGTTTCCAA
TAAAGTTGTG CAGATCACAT TATATTGTTC TAAGAACTGA GAAATTTTAT ATGCTCTTGG CAGGTACCTC GAAGGAAATG
CATTCCGGCC TGGTGTCAAC CCCATTGGTT TTCATAAAGT GCTTGAAGTT TCTGATTCAG ACTTCCTTGC TTAATAAAAG
CTCTAAATAT TTATAATTTT TCAGGAACTG TACTTGTATA ATTATTGAAA AAATCTTGTT CCTCTAATTA CCTCAATGAA
ATACCCACAT AGGTAATTCA ATTTTGTCTA ATCTGTCTTG TGGTAATAAA CAGTCTTTTT TAGTTTACTA TTTAAGAGCT
TTCCACGTTT CCAACAAGTT GTAATATATA GTCATGAACT CTTGTTATCA GCTTCAAAAT TGAAGAATGA TATTGCATAT
TTTTTCAGTA AAAGAATATT ACTGAATCCC TGTTGGACTC TAA

>Vigan.10G049300.01
TAAAAAACAA AAGAGAGAAA AGAAAACCAT CAAAACCTCA GTGCCGACGC CAAGGAGTGT GTTGTTGGAT GTTCAGATTC
CAACATGATA CCGCGTTCGC TCACTCTCAA CTTCAATTGA TCAATCACCA AAATCAAATT CCTACACCAC ACCTTCTCTC
TCCTTTGCAA AATCTGAATC AACAACATAC AGCAAAACAT GTCACTCAAC CACACCAACA ACACTTCAGA TCTACGATTC
CAATCCCACA ACACAAAAAA TAAACAAAAA CCGATTTCTC CAAGCGCCCT CAAAATGGCG CCTTCACCCT TCACTTCATT
ACCCTTCGTC TTCTTTACCC TTCTGTCAAT TCTCCACCTT TCGCACTGCA AGACCCTAAA GCGTGACGTT AAGGCTTTGA
ACGAGATCAA GGCTTCTCTT GGGTGGAGAG TGGTGTATGC GTGGGTCGGT GATGACCCTT GTGGTGATGG GGATCTTCCT
CCTTGGTCTG GTGTCACGTG TTCCACTGTC GGTGATTATC GTGTCGTGAC CGAGCTTGAG GTGTATGCGG TGTCGATTGT
CGGACCTTTT CCTACTGCTG TAACCAGCTT ACTGGATCTT ACACGGCTTG ATCTTCACAA TAACAAGTTG ACAGGGCCTA
TTCCTCCTCA AATTGGACGG TTGAGGCGTC TTAAAATACT AAATTTGAGG TGGAACAAAC TACAGGATGC AATTCCTCCA
GAAATTGGTC AGCTCAAAAG TTTAACACAT CTGTACCTAA GCTTCAACAA TTTTAAGGGA GAAATTCCCA AGGAGCTAGC
AAATCTGCCT GACCTTCGCT ATCTTCATCT CCATGAAAAC CGTTTAACCG GAAGAATACC ACCAGAATTG GGCACTCTAC
AAAATCTTCG GCACTTGGAT GCTGGTAACA ATCATTTGGT GGGTACCTTA AGGGAACTCA TTCGTATTGA AGGTTGCTTT
CCAGCCCTAC GCAATCTATA TCTAAACAAT AATTATTTTA CTGGAGGAGT ACCTGCACAA CTTGCTAACT TAACCAGTCT
TGAAATATTG TACCTATCCT ACAACAAAAT GTCAGGAGTT ATACCATCTA GCATTGCTCA TATTCCTAAA TTGACATACT
TGTACTTGGA TCACAATCAG TTTTCAGGGA GAATTCCCGA TCCCTTTTAT AAGCATCTAT TTTTGAAAGA AATGTACCTC
GAAGGAAATG CATTCCGGCC TGGTGTCAAC CCCATTGGTT TTCATAAAGT GCTTGAAGTT TCTGATTCAG ACTTCCTTGC
TTAATAAAAG CTCTAAATAT TTATAATTTT TCAGGAACTG TACTTGTATA ATTATTGAAA AAATCTTGTT CCTCTAATTA
CCTCAATGAA ATACCCACAT AGGTAATTCA ATTTTGTCTA ATCTGTCTTG TGGTAATAAA CAGTCTTTTT TAGTTTACTA
TTTAAGAGCT TTCCACGTTT CCAACAAGTT GTAATATATA GTCATGAACT CTTGTTATCA GCTTCAAAAT TGAAGAATGA
TATTGCATAT TTTTTCAGTA AAAGAATATT ACTGAATCCC TGTTGGACTC TAA

>Vigan.10G049300.01
ATGTCACTCA ACCACACCAA CAACACTTCA GATCTACGAT TCCAATCCCA CAACACAAAA AATAAACAAA AACCGATTTC
TCCAAGCGCC CTCAAAATGG CGCCTTCACC CTTCACTTCA TTACCCTTCG TCTTCTTTAC CCTTCTGTCA ATTCTCCACC
TTTCGCACTG CAAGACCCTA AAGCGTGACG TTAAGGCTTT GAACGAGATC AAGGCTTCTC TTGGGTGGAG AGTGGTGTAT
GCGTGGGTCG GTGATGACCC TTGTGGTGAT GGGGATCTTC CTCCTTGGTC TGGTGTCACG TGTTCCACTG TCGGTGATTA
TCGTGTCGTG ACCGAGCTTG AGGTGTATGC GGTGTCGATT GTCGGACCTT TTCCTACTGC TGTAACCAGC TTACTGGATC
TTACACGGCT TGATCTTCAC AATAACAAGT TGACAGGGCC TATTCCTCCT CAAATTGGAC GGTTGAGGCG TCTTAAAATA
CTAAATTTGA GGTGGAACAA ACTACAGGAT GCAATTCCTC CAGAAATTGG TCAGCTCAAA AGTTTAACAC ATCTGTACCT
AAGCTTCAAC AATTTTAAGG GAGAAATTCC CAAGGAGCTA GCAAATCTGC CTGACCTTCG CTATCTTCAT CTCCATGAAA
ACCGTTTAAC CGGAAGAATA CCACCAGAAT TGGGCACTCT ACAAAATCTT CGGCACTTGG ATGCTGGTAA CAATCATTTG
GTGGGTACCT TAAGGGAACT CATTCGTATT GAAGGTTGCT TTCCAGCCCT ACGCAATCTA TATCTAAACA ATAATTATTT
TACTGGAGGA GTACCTGCAC AACTTGCTAA CTTAACCAGT CTTGAAATAT TGTACCTATC CTACAACAAA ATGTCAGGAG
TTATACCATC TAGCATTGCT CATATTCCTA AATTGACATA CTTGTACTTG GATCACAATC AGTTTTCAGG GAGAATTCCC
GATCCCTTTT ATAAGCATCT ATTTTTGAAA GAAATGTACC TCGAAGGAAA TGCATTCCGG CCTGGTGTCA ACCCCATTGG
TTTTCATAAA GTGCTTGAAG TTTCTGATTC AGACTTCCTT GCTTAA

>Vigan.10G049300.01
MSLNHTNNTS DLRFQSHNTK NKQKPISPSA LKMAPSPFTS LPFVFFTLLS ILHLSHCKTL KRDVKALNEI KASLGWRVVY
AWVGDDPCGD GDLPPWSGVT CSTVGDYRVV TELEVYAVSI VGPFPTAVTS LLDLTRLDLH NNKLTGPIPP QIGRLRRLKI
LNLRWNKLQD AIPPEIGQLK SLTHLYLSFN NFKGEIPKEL ANLPDLRYLH LHENRLTGRI PPELGTLQNL RHLDAGNNHL
VGTLRELIRI EGCFPALRNL YLNNNYFTGG VPAQLANLTS LEILYLSYNK MSGVIPSSIA HIPKLTYLYL DHNQFSGRIP
DPFYKHLFLK EMYLEGNAFR PGVNPIGFHK VLEVSDSDFL A*