GBrowse Details

Vigan.10G048100.01

Basic Information:
Name: Vigan.10G048100.01
Multiple alignment
Variant Information
Position: Chr10:4864080..4867698 (- strand)
Length: 3619
Functional Information:
Description: Similar to Uncharacterized protein. [I3T6X5, Medicago truncatula]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Ankyrin repeat (IPR002110)
Ankyrin repeat-containing domain (IPR020683)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:70.63,50.94,15.17,18.42,19.34,18.58,15.49,17.28
Arabidopsis thaliana homolog: AT2G03430.1
Automatic updates:
Name: NM_001251227 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499930 (LOC100499930), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:4864080..4864274 (- strand)
Length: 195
Type: three_prime_UTR
Position: Chr10:4864275..4864406 (- strand)
Length: 132
Type: CDS
Position: Chr10:4865466..4865612 (- strand)
Length: 147
Type: CDS
Position: Chr10:4865731..4865855 (- strand)
Length: 125
Type: CDS
Position: Chr10:4867057..4867189 (- strand)
Length: 133
Type: CDS
Position: Chr10:4867348..4867533 (- strand)
Length: 186
Type: CDS
Position: Chr10:4867534..4867698 (- strand)
Length: 165
Type: five_prime_UTR

>Vigan.10G048100.01 class=Sequence position=Chr10:4864080..4867698 (- strand)
TGTGTTTGCT ACTTAGATTT GAGGAAATCT TCAGTTATTG TCTTTCCGAA CATTACTCTC CGAAAAAATA TAAAAAATCA
ATCCCAAAGA CATTAGAATT TTGACGTTAC AGTGCAGTGG CTCCCAGAGA AACGTGAAAA TCAGTGAGAG AAGAAAACGA
TAGAGATGGA AGTGGACAGC GAGAAGAAGC AACAATACTT GAAAGAGAAG GACTTGTTCA AAGCAGCTGA AGAAGGTGAT
GCTGCAACGT TCCAAGCTCT CTCCGCTGAA ACTCTCTCCA AAACGCTCTC TCTCAGAAAC GAAGATGCTC GCTCCCTTCT
CCACGTTGCC GCCTCTTTCG GCCACTCCCA GGTACCCTTT TGCTCCTTTT CAAAAGGGTC TCCTTGTTTT TCCTTCAATT
GTTATAAATG TGCATTCGTT GTGCATTTGC CACCACACTT TGAAATTAGG GTTTTTTGGT TGGTGGAATC GTTGTTTTTA
TTGTTGTTTG TTTGAATGAA TTTGTTTAGG TGGTGAAGAC ACTGTTATCT TGTGATGGGT CTGCTTGTGT GGTGAATAGT
GTCGATGAGG AAGGTTGGGC ACCGCTTCAC TCCGCCGCCA GCATTGGGAA TTTGGAGATA GTAGATACTC TATTGAGCAA
AGGTCAAAAT AATGCTCTTT TCTAAAGTTT ACTCTACACA TCGCTTTTTA CTTAATTATC ATTATTATTT ATTCTTTATC
TCAATCAGTA CCATTTCCCC CCTTCAGAAT TGAAGTGTAA TCTGGGTGGA TAAGTTGTTA GTTTCTGTTT ACTGAGAATG
ATGATTGATT TGGTTGGAGA TCTCGCATAA TATATAGATA TGGCCAAATA ATACTACATA TATGGTTGAA AATCTCATCT
TACTAAGTAA GTTTTTTAAG AATGAATTAG ATTTAAATTT CATCCAGTGA AAGGTTTGTT GTGTTTATTG TGTTATCTGT
TATTTGGCAT TCCTCTATTC ACATGTCTAA TCATCAGGGG AGTGTTAGAA ATCTCACATT TTTTATAGAT ATGGCCACAA
CTTCCATAAT ATGGCCAAAT AATAATATAT AGATGAGTAC AAACCTAGTC TTACTAAGCC GGTGTTAAAA CTTGAGTTAA
CTTCCTAAGA GATTTGAATG CAACTTTATT GTGAGACTTG ATATTAGGAA AGATGTTGTA CAATGGTTTT AGGAAAACAG
TTCCGGTGAC TGTGACCTAT AGATGCAAGA TTTTTTGGGG TTCTGTGAAG GCATTACAAT CATAAGTTCA GCTGCATTGG
CCAGTAGTCT ACCACATTAT CAAGGATTGT GAGGTAGCAA CGATTTAAAA CCCTTGGAGC TGGTACTATT CATTTGGTTA
TAGTTGCTTA TTAATAGTCA TCTTCTCTAT GGTGTTTCTC TGATGTTTGA TTTCAATTTC TTAGTATTCT ATAATAGAGT
TGAGGACTTG ATGTGCATCT TTCTCCATGT TCATTGTGTT CCAGCCTTTT ACTGCACATT GTGCCCATCT TTTTGCTCTG
TTCAGATTGT GGATTAGTGT TGGGAAGCTT TTAAATTTAT GTAGTTTTTG TGATGAAAAT GGTGGTAACA GTTTGTCGGG
TGCTTTCAAG TGTCAATTTT GGATTTCTAT TAATTTTCAT TTTCTATATC GTTGATTGAA TATGTAGGCT ACTATTGTGC
GCTGCATGTA TTTTGTAAAT TGTGGTATTG ACCTTGAAGA ATCACAAGTC TATTGATAAA ATGTGGCTCC TGTGTGATAG
CCTATACCTT TCCAGACTAA AACTTCATTT GCTAAAGATT CATCAATCAT CTCAAAAATG TTCTTGTTTC TCGTGTTTGG
TAGGAGCTGA TGTTAATCTG AAAAATGATG GGGGTCGCTC TGCTTTACAC TATGCAGCCA GCAAAGGTTG GATGAAGATT
GCTGAAATCC TCATCTCGCA TGATGCCAAG ATTAATATAA AGGATAAGGT TGTAGCCTGG AATCATTTGA TTGGTTTGTA
ACACTAGTTT CACTGTATCC CTTTTCTTCA TAATCGCATT GTTAAAGATA ACATGTAGAC TAATTTAGTG TATGTCTTGT
ACTTAGATTG GTAGCACTCC ATTGCACCGA GCAGCTAGCA CTGGTAAATC TGATATGTGT GAACTTTTGA TTGAAGAGGG
AGCAGAGGTT GACATTACGG ATAGAACTGG TCAAACTCCT CTGATGAATG CTGTGATTTA CCATAACAAA GAGGTATGCT
TATTTTATAT GTGAGCATGC ACACGTGTGT ACTCTGCAAT AGCAAAAGTA CACATTGAAC CATCTGAACA ATTTTACTCA
GAAATGTGTA TATAATTATA TTAGATGACA AATCTCCTTT TAATCATGCT TAATGTTTTT GTTTGCATAA TTCACATGTA
CCTTTGTAAT AAAGAAAAAG ATGTGACTTC TTCATTCATT TGTTTGTTTT CTATTAATCC AATGGCTTAA TTAGTTTCTT
TACAAGTGAA TTTTTGGAGG AGGATGCTAT GTTGATTGTT CAAAAATCAT AACTGAATCG TGAAGTATTT TCTCTTTATT
TGATGCACTC TTAACAGATA TCTCTCCCCA CTCATTTCAA ATTAAAATTA TGTTTGGGCC TTGCTTGTAG TGCCTGGTCA
ACAACATTGA AGCATTTAAC GCTAGGATGG AGCTGTGTAA TGCTAATTGT ACTTTGTTAG TTCCTCATCG TTTCTTATTC
TGTCATGCTG TCTCACTAGT CACTATCTTT TATTTTTAAT CTTAAAAATA GTGGTAAGGG TTTGGTCTTC TAAGTATAAA
TGAATGCATG CATTCTGCAT AGAGGGGAAT TCTCATAAAA TAAATAATTT TTGGTTCTTA TATTAAAAAC AAAAGGGTTC
ATACATATTT GATTCTTACA TTTTGCATCT TATTTTATGT AATATTAAAT ATAAAAGTTG GTTAGTTGCA ATGGCATATA
ATTTGCTATT CTACTATTAA CTGATTTACT GGTTATGTAA GTTCAGCAAT AAAGAATGAA AGTTGATACC CAAACATTTT
CTAGTCAAGA CTCTAATAAA CTGCTGCTTT GCTTTTGGCA CTTGAAAAGG AAATTCTGGC TAGTAGTTGT TAGATGTTGG
CTATGTTTGA CAAAACTAGT CAAGAAACTA TCTGGTAACT TGTTATATGG AGTACATTTC ATGAATGATG AGGAATGTTT
TGATGACAGT TTTGTTATTG GAGTCCTATA ATTGTTGAGC ATTATACATT AACTCTTGGG GCATAAACCT TTTTGATGTG
TATGTTTTAC AGGTAGCTCT CCTTCTGATA AGACATGGAG CAGATGTGGA TATGGAGGAC AAGGAAGGGT ACACAGTACT
TGGTCGTGCT ACAGATGAAT TAAGACCTAT ATTAATCGAT GCTGCCAAGG CCATGTTGGA GTAATATATC TGTAAGAAAA
TGAGAAAATG TTATCACTAT AAAAGAGCAG AATTGTGGTA GTTATATTAT TGGATTCATT AGTAGTGGTT TTCTGCAAAA
ACTCAGATCA TCATACCATT GTTCTGTTCA GGCAAAAACT CATCTTTACC TATATATATA TATTTAGTTG TAAAATTTTG
CCATCTTTTT AGATTAGAA

>Vigan.10G048100.01
TGTGTTTGCT ACTTAGATTT GAGGAAATCT TCAGTTATTG TCTTTCCGAA CATTACTCTC CGAAAAAATA TAAAAAATCA
ATCCCAAAGA CATTAGAATT TTGACGTTAC AGTGCAGTGG CTCCCAGAGA AACGTGAAAA TCAGTGAGAG AAGAAAACGA
TAGAGATGGA AGTGGACAGC GAGAAGAAGC AACAATACTT GAAAGAGAAG GACTTGTTCA AAGCAGCTGA AGAAGGTGAT
GCTGCAACGT TCCAAGCTCT CTCCGCTGAA ACTCTCTCCA AAACGCTCTC TCTCAGAAAC GAAGATGCTC GCTCCCTTCT
CCACGTTGCC GCCTCTTTCG GCCACTCCCA GGTGGTGAAG ACACTGTTAT CTTGTGATGG GTCTGCTTGT GTGGTGAATA
GTGTCGATGA GGAAGGTTGG GCACCGCTTC ACTCCGCCGC CAGCATTGGG AATTTGGAGA TAGTAGATAC TCTATTGAGC
AAAGGAGCTG ATGTTAATCT GAAAAATGAT GGGGGTCGCT CTGCTTTACA CTATGCAGCC AGCAAAGGTT GGATGAAGAT
TGCTGAAATC CTCATCTCGC ATGATGCCAA GATTAATATA AAGGATAAGA TTGGTAGCAC TCCATTGCAC CGAGCAGCTA
GCACTGGTAA ATCTGATATG TGTGAACTTT TGATTGAAGA GGGAGCAGAG GTTGACATTA CGGATAGAAC TGGTCAAACT
CCTCTGATGA ATGCTGTGAT TTACCATAAC AAAGAGGTAG CTCTCCTTCT GATAAGACAT GGAGCAGATG TGGATATGGA
GGACAAGGAA GGGTACACAG TACTTGGTCG TGCTACAGAT GAATTAAGAC CTATATTAAT CGATGCTGCC AAGGCCATGT
TGGAGTAATA TATCTGTAAG AAAATGAGAA AATGTTATCA CTATAAAAGA GCAGAATTGT GGTAGTTATA TTATTGGATT
CATTAGTAGT GGTTTTCTGC AAAAACTCAG ATCATCATAC CATTGTTCTG TTCAGGCAAA AACTCATCTT TACCTATATA
TATATATTTA GTTGTAAAAT TTTGCCATCT TTTTAGATTA GAA

>Vigan.10G048100.01
ATGGAAGTGG ACAGCGAGAA GAAGCAACAA TACTTGAAAG AGAAGGACTT GTTCAAAGCA GCTGAAGAAG GTGATGCTGC
AACGTTCCAA GCTCTCTCCG CTGAAACTCT CTCCAAAACG CTCTCTCTCA GAAACGAAGA TGCTCGCTCC CTTCTCCACG
TTGCCGCCTC TTTCGGCCAC TCCCAGGTGG TGAAGACACT GTTATCTTGT GATGGGTCTG CTTGTGTGGT GAATAGTGTC
GATGAGGAAG GTTGGGCACC GCTTCACTCC GCCGCCAGCA TTGGGAATTT GGAGATAGTA GATACTCTAT TGAGCAAAGG
AGCTGATGTT AATCTGAAAA ATGATGGGGG TCGCTCTGCT TTACACTATG CAGCCAGCAA AGGTTGGATG AAGATTGCTG
AAATCCTCAT CTCGCATGAT GCCAAGATTA ATATAAAGGA TAAGATTGGT AGCACTCCAT TGCACCGAGC AGCTAGCACT
GGTAAATCTG ATATGTGTGA ACTTTTGATT GAAGAGGGAG CAGAGGTTGA CATTACGGAT AGAACTGGTC AAACTCCTCT
GATGAATGCT GTGATTTACC ATAACAAAGA GGTAGCTCTC CTTCTGATAA GACATGGAGC AGATGTGGAT ATGGAGGACA
AGGAAGGGTA CACAGTACTT GGTCGTGCTA CAGATGAATT AAGACCTATA TTAATCGATG CTGCCAAGGC CATGTTGGAG
TAA

>Vigan.10G048100.01
MEVDSEKKQQ YLKEKDLFKA AEEGDAATFQ ALSAETLSKT LSLRNEDARS LLHVAASFGH SQVVKTLLSC DGSACVVNSV
DEEGWAPLHS AASIGNLEIV DTLLSKGADV NLKNDGGRSA LHYAASKGWM KIAEILISHD AKINIKDKIG STPLHRAAST
GKSDMCELLI EEGAEVDITD RTGQTPLMNA VIYHNKEVAL LLIRHGADVD MEDKEGYTVL GRATDELRPI LIDAAKAMLE
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