GBrowse Details

Vigan.10G046200.01

Basic Information:
Name: Vigan.10G046200.01
Multiple alignment
Variant Information
Position: Chr10:4636448..4639342 (- strand)
Length: 2895
Functional Information:
Description: Similar to Uncharacterized protein. [Q45RR9, Glycine max]
GO: Biological Process: regulation of barrier septum assembly (GO:0032955)
Biological Process: cell division (GO:0051301)
InterPro: Septum formation topological specificity factor MinE (IPR005527)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.85,8.27,6.58,15.25,9.60,5.65,9.31,6.87
Arabidopsis thaliana homolog: AT1G69390.1
Automatic updates:
Name: NM_001249423 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499811 (LOC100499811), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001250068 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max plastid division regulator MinE (LOC732562), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:4636448..4636769 (- strand)
Length: 322
Type: three_prime_UTR
Position: Chr10:4636770..4637378 (- strand)
Length: 609
Type: CDS
Position: Chr10:4639068..4639169 (- strand)
Length: 102
Type: CDS
Position: Chr10:4639170..4639342 (- strand)
Length: 173
Type: five_prime_UTR

>Vigan.10G046200.01 class=Sequence position=Chr10:4636448..4639342 (- strand)
ATTCTCTTCT CTAAAAGAAA AAGGGAATAT AGAAAAGAAA AAAAGGGAAT ATAGAAAAGA AAGGCGGGCG AAACGACGAC
GTAATTGGGG CGTAATAATA GCAGGGAAAT TGAAGATTGT GACTGATAAC ATCGAAGTTC CGTTTCTCGG AGCACACTAC
GAAGCTATCA ACAATGGCGA TTTCCGGCGA TCTGCGAGTC TCTGCCACTC TTCCTCTCTA TCGCTCCCAC TCCCACTCAC
CTCCACTTCG AACTGCTTTC GTCCCTTCTC CTAAGGTTTC ATTTTTTTCA TCTCTCTATT TCCCTCTTAT CTTCTCACGA
ATGCTTCTCA CTCTCTGTCA CAACATGCAT GCATTCTCAT TGCAATTCCA CTCATGCTGA ATTCAACGCT TAATTACCCG
CAAACCGCAC CGTTTGAGGG CTCCACAATC CGGTTAGGGT TTTTATAAAA TTGCGGTGTT TTATAATATT GTACTCAGTG
GAGAGTCAAA CGTGAAGCAT TCAAAATAGA AACAAAGAAT AATATAGTTA CCATTTTAAG ATAAAATAGT AGTCTTGAAG
AAACTGATGT GACCCTTTAT CCGAGCTCAT AAATTTTGTT TTATGTATGC ATTTAGCGTC ATTTGGCATG ATGTGATGGA
TGGTCTAGTG ACATGTCTGG TAGAACGTGA AAACCTTACA CTATAGTGGT GATTGCTTAG GTGGTGTATG CCTGATTTTT
GTTAAGTATG GGCTTAGGTT CGATTTTTGA CCCTTGTAAA GATTAAGACC CTATGACTAT TCAGCCTTTT ATGTGCTTTT
TTCCAGTTGC TAGTGTGTGT GATGGAGCAG GATTGAGGGG ATTGTTTGCG AAGTTGGCGA ACTTTCTTGA GCTTCAAACC
TGCAAACATT TATGTTAGGA TCCATTTGCA TGGAAGGAAC TAGAGTGCCA TATTGGAATT ATGGGATTGT AGTCTGGGGT
TTATAAGACC TCAAGCTCTC CAACTACAAT CATGGACTTT CGTGGTATGG TTCTCCCGAG GATCTTATCA ATTTATAGTA
AGCTTACGAT TTTGTTCAGG TTATGACACT TGGGCCAACC ACTTTCTCTA TTCTCTTCCT CGAGTGTTGA CAGCTTGTGT
GGTGGCTTGA CCTTCTTGAA TCACACAATC TTCCTCTTAA TCCCTAAATC CCCCTCGACT CGATCTCTTT GAATCACTCT
ATCTCTCCTC ACTAAGACTC TCAACTCCTC TGATAGGTTG TATAACTTGG CTGAAGTACT TTTTTTTTGG TTTTGAAACC
GGTGGAGTAG GCTTCTTTTG GCTTTTTCAT TGAAATACAA CATCTCCTAC TTTTGGAATG TCTTTTCTGC GCTTCTTTAT
GCTATTCTAT GTTTTTTCTA CCTACACAAG ATTGTCTCCC ATAGAAGGTA CCTGTGGTTC TAAACCAAAT AATATTATAG
GTGTTTTTCA TATGATGGAA ATCCATGCAA AGTGTTGGAT TATACACTAT TTTGTCTCTC TGCGATTAGT TGAATGCTAT
GAAAGATCTT ATTAGGCTAA GTTGATATGA TAGCCTGCAT TCTTAAGTTG TAACTCCATT TCATGGCCCT CTAGACGAAA
GTATTAGAGG AGGGCATCAT TATGTTTGCA TCATTTTTCA TTTGATTGAA AATATTTATA ACATATTCCG TTAGATTATA
GAATATATTT TGCGATTCAG TTGGAGGGGT TCAGTGTGAT TACAGAGATT GTGGTAGTGC ATTTATGTTT TCTGATTTTT
CAGTTGTGTG GGGAAAGGTT CAATAAAAAG CTCTTTGATT TTCTATTTGA TTAGATGTCT TTATTCAGAT TTCAGATGCT
CGTGGCGTAG CTTCTTGAAT TTTGTATGTT GATAAATGTT CACATTAACC TTAATATTAT TTCAAGATTT TGAAAGAAAT
GAAAAATGCC TTCTCGATAA TGTTTCAAAT TTTCTGTCTA ATAGGTAGAC TTTCATCGAT TCTTGAATAG AGCATGTAAC
ATCTCTGAAT TCACCCCAAA ATGCCCTTGC CTGACAATTG TACGATGCAA TATTCGTGGG TCTTGCAAGC CAGTGGCTGC
AATCCTTGGA GGTCCTAAAT TCACCTCAAA TTCAGTTAGT CAAGAAGCTG AAAATTTTCT CCTTGACGCT GTCAAAATGA
ACTTCTTTGA GCGATTAAAT TTGGCTTGGA AGATAATTTT CCCATCGGCA ACATCTAGAA AAAACTCTAA TGCTAGAATT
GCTAAGCAAC GCTTGAAGAT GATTTTGTTC TCTGATCGGT GTGCAGTAAG TGATGAGGCA AAGCGAAAAA TTGTCAGCAA
TGTTGTGCGT GCTCTATCTG ACTTTGTGGA AATAGAATCA CAGGATAAAG TTCAGCTGAG TGTCTCTGCT GACACAGATC
TTGGAACTAT TTACTCTGTT ACTGTGCCTG TACGGCGAGT TAAGCCAGAA TATCAAGATA TGGATGAATT TGGGACGATA
ACAAATGTTG AGTATAAGGA CACTGGAGAG AGTTCCGGTT CTGTTGATGT TAGATTTGAT TTCTATGTTC CAGACGAAAC
AACTGGATTT TGAGTTGAAA GATCTTGAAT CTTGATTTCG ATGAAAAGTA AGCGTTTGAA ATGCTTACCA GTGAGAGCAA
ATGTGGAGTG GTGTATATAT TTTAAAATTG AAGCTTACAT TAGGTTGACA CTAGATTTTG ATCAGAAATT TTGTTTTTGT
ATTACCTATA TCAGTTATTT TGGTTCGTTG CATCATTGAA CTATGATATG CTGTGATTTC TTACGTAGCA TTTTATGATA
AGCATTTGTT TTAGTGTATG AATCGTGATT ATTCATGAAA TTTGTTCTAC TTACGTGATT GTATATAAAA TTATAACTAA
GTGGTTTGTA AACAA

>Vigan.10G046200.01
ATTCTCTTCT CTAAAAGAAA AAGGGAATAT AGAAAAGAAA AAAAGGGAAT ATAGAAAAGA AAGGCGGGCG AAACGACGAC
GTAATTGGGG CGTAATAATA GCAGGGAAAT TGAAGATTGT GACTGATAAC ATCGAAGTTC CGTTTCTCGG AGCACACTAC
GAAGCTATCA ACAATGGCGA TTTCCGGCGA TCTGCGAGTC TCTGCCACTC TTCCTCTCTA TCGCTCCCAC TCCCACTCAC
CTCCACTTCG AACTGCTTTC GTCCCTTCTC CTAAGGTAGA CTTTCATCGA TTCTTGAATA GAGCATGTAA CATCTCTGAA
TTCACCCCAA AATGCCCTTG CCTGACAATT GTACGATGCA ATATTCGTGG GTCTTGCAAG CCAGTGGCTG CAATCCTTGG
AGGTCCTAAA TTCACCTCAA ATTCAGTTAG TCAAGAAGCT GAAAATTTTC TCCTTGACGC TGTCAAAATG AACTTCTTTG
AGCGATTAAA TTTGGCTTGG AAGATAATTT TCCCATCGGC AACATCTAGA AAAAACTCTA ATGCTAGAAT TGCTAAGCAA
CGCTTGAAGA TGATTTTGTT CTCTGATCGG TGTGCAGTAA GTGATGAGGC AAAGCGAAAA ATTGTCAGCA ATGTTGTGCG
TGCTCTATCT GACTTTGTGG AAATAGAATC ACAGGATAAA GTTCAGCTGA GTGTCTCTGC TGACACAGAT CTTGGAACTA
TTTACTCTGT TACTGTGCCT GTACGGCGAG TTAAGCCAGA ATATCAAGAT ATGGATGAAT TTGGGACGAT AACAAATGTT
GAGTATAAGG ACACTGGAGA GAGTTCCGGT TCTGTTGATG TTAGATTTGA TTTCTATGTT CCAGACGAAA CAACTGGATT
TTGAGTTGAA AGATCTTGAA TCTTGATTTC GATGAAAAGT AAGCGTTTGA AATGCTTACC AGTGAGAGCA AATGTGGAGT
GGTGTATATA TTTTAAAATT GAAGCTTACA TTAGGTTGAC ACTAGATTTT GATCAGAAAT TTTGTTTTTG TATTACCTAT
ATCAGTTATT TTGGTTCGTT GCATCATTGA ACTATGATAT GCTGTGATTT CTTACGTAGC ATTTTATGAT AAGCATTTGT
TTTAGTGTAT GAATCGTGAT TATTCATGAA ATTTGTTCTA CTTACGTGAT TGTATATAAA ATTATAACTA AGTGGTTTGT
AAACAA

>Vigan.10G046200.01
ATGGCGATTT CCGGCGATCT GCGAGTCTCT GCCACTCTTC CTCTCTATCG CTCCCACTCC CACTCACCTC CACTTCGAAC
TGCTTTCGTC CCTTCTCCTA AGGTAGACTT TCATCGATTC TTGAATAGAG CATGTAACAT CTCTGAATTC ACCCCAAAAT
GCCCTTGCCT GACAATTGTA CGATGCAATA TTCGTGGGTC TTGCAAGCCA GTGGCTGCAA TCCTTGGAGG TCCTAAATTC
ACCTCAAATT CAGTTAGTCA AGAAGCTGAA AATTTTCTCC TTGACGCTGT CAAAATGAAC TTCTTTGAGC GATTAAATTT
GGCTTGGAAG ATAATTTTCC CATCGGCAAC ATCTAGAAAA AACTCTAATG CTAGAATTGC TAAGCAACGC TTGAAGATGA
TTTTGTTCTC TGATCGGTGT GCAGTAAGTG ATGAGGCAAA GCGAAAAATT GTCAGCAATG TTGTGCGTGC TCTATCTGAC
TTTGTGGAAA TAGAATCACA GGATAAAGTT CAGCTGAGTG TCTCTGCTGA CACAGATCTT GGAACTATTT ACTCTGTTAC
TGTGCCTGTA CGGCGAGTTA AGCCAGAATA TCAAGATATG GATGAATTTG GGACGATAAC AAATGTTGAG TATAAGGACA
CTGGAGAGAG TTCCGGTTCT GTTGATGTTA GATTTGATTT CTATGTTCCA GACGAAACAA CTGGATTTTG A

>Vigan.10G046200.01
MAISGDLRVS ATLPLYRSHS HSPPLRTAFV PSPKVDFHRF LNRACNISEF TPKCPCLTIV RCNIRGSCKP VAAILGGPKF
TSNSVSQEAE NFLLDAVKMN FFERLNLAWK IIFPSATSRK NSNARIAKQR LKMILFSDRC AVSDEAKRKI VSNVVRALSD
FVEIESQDKV QLSVSADTDL GTIYSVTVPV RRVKPEYQDM DEFGTITNVE YKDTGESSGS VDVRFDFYVP DETTGF*