GBrowse Details

Vigan.10G045700.01

Basic Information:
Name: Vigan.10G045700.01
Multiple alignment
Variant Information
Position: Chr10:4589357..4595509 (+ strand)
Length: 6153
Functional Information:
Description: Similar to Glutamate 5-kinase. [G7JWN1, Medicago truncatula]
InterPro: Aspartate/glutamate/uridylate kinase (IPR001048)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:19.52,22.09,12.20,18.79,7.80,24.07,18.63,12.75
Arabidopsis thaliana homolog: AT1G26640.1
Automatic updates:
Name: NM_001255484 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100792453 (LOC100792453), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr10:4589357..4589477 (+ strand)
Length: 121
Type: five_prime_UTR
Position: Chr10:4589478..4589565 (+ strand)
Length: 88
Type: CDS
Position: Chr10:4589861..4590085 (+ strand)
Length: 225
Type: CDS
Position: Chr10:4590755..4590852 (+ strand)
Length: 98
Type: CDS
Position: Chr10:4591755..4591797 (+ strand)
Length: 43
Type: CDS
Position: Chr10:4592891..4592952 (+ strand)
Length: 62
Type: CDS
Position: Chr10:4593081..4593137 (+ strand)
Length: 57
Type: CDS
Position: Chr10:4593869..4593904 (+ strand)
Length: 36
Type: CDS
Position: Chr10:4593985..4594062 (+ strand)
Length: 78
Type: CDS
Position: Chr10:4594392..4594458 (+ strand)
Length: 67
Type: CDS
Position: Chr10:4594547..4594600 (+ strand)
Length: 54
Type: CDS
Position: Chr10:4594833..4594936 (+ strand)
Length: 104
Type: CDS
Position: Chr10:4595014..4595109 (+ strand)
Length: 96
Type: CDS
Position: Chr10:4595110..4595509 (+ strand)
Length: 400
Type: three_prime_UTR

>Vigan.10G045700.01 class=Sequence position=Chr10:4589357..4595509 (+ strand)
TAAAAGTAAA AAACTAAAAT TGAAGTTAAA CCATGAAAAG ATAGTTAACT TGTGGACAGA TTCCACGACA TTAAACATCT
TTGATCGGTG AAGTAGGCGT GTGGAGAATC GGAGAAGGGG AATGGAGAAG AACAAGAATC AGAGCCAAAC ACTCACTTCC
TCACCCCTTT CTCCTTTCAC TCCATCAATC CGTTGCATAG TCAAACTCGG TATCACACTC TCCGGGCTTT TGTTTCTGAA
CTCCTTTTGT ATTATTTGCA TATTTTCTTT CCAAAGATTG TTGTTTTACA ATGCTGCTGC CCTCTTCCAT GTCAAAGTGT
TTATTTTTTT TTGCATATAA GCATCTGGGG TGTCTCTTAT TCACCAAACA GACAGACCCT TGAAGAGTGT TTGTTCTGTT
CTTAAAAAAT TTGGATGAGA CCCTTTAGTG TTGTACATGG AGTGCTTCAC TTTGAGGGTT TTCAATCAGT GAACAAAGTG
AAATGCTTTT GGTTGGGTAT TCAGGAGGAG CTGCGGTTAC TTGCAAAGAT GAATTGGAGA TGATAAATGA GGAGGTTCTT
CAGAAGGTTT CAGAACAGCT GAGGCAAGCT ATGATTGCAT CTTCTGAGAA GCCTCCCGGG ATGGATTGGA GCAAGAGACC
TGGAGGGTCA GAAATCTGTT GCAATCCGGA AGAATTTGGA GATCATTCTG CTATGGAATG TAGCCCTTTC ATTGTGGTTC
ATGGAGCAGG TTCCTTGAGT TCCTTTTCTT TTTCTCTTCG TTTTGAAGTA AACTTTTTTT TTTCTAGTAA TAGTAAGAAA
AATAAGAATT CAATTAGAAT AGTGAATACA CTGACAATAT AAAGGCATTT TACACCCTCA TGTAATCATA TAAAACTAAG
TTTGTTGATT TTTATATTAA CTGCTTTAAA AGTCATACTT GGGGATGATT TTCAATTGGT TGATGGCATA AGAATTTTAT
ATTGATAGTG CATGAAAATT AAACACTAGA AATGTTAGGA AAATTAGTTT TTTTTTTTAA TATTTTGATG TCGCACATAC
TAACATTGCA TCGGTCTTCC AACTATCAAT GACACCAAAT TAATCCTCTA ATGATAGTTT ACGTCAAAAG ATTTGTTCTT
CATGGACCAA TTTGATGTTA TTTTAAGGAT CCATTTAATG GAAAAGTGAA AGAAAATATG GCATTAAAGG ACATATTAAT
GCAAAATTGG CACACATATC TTGTGTATCA ATTTGATGTA TTTATAAATG GAAGACCAAT TTGATGTTTG TAATCTATTA
GTTTTTATAA ACTATTCAAG TTAAAACTGT TATAGAGATT TAGTATTATC TGTTGCGCTG GATGGATGGA GCTCCCTGAA
TTAACAATAT TTTGTCCTCA AACCGGTGAT TATCTCAGGT TCTTTTGGGC ACTTCCAAGC TAGCAAATCT GGTGTCCACA
AGGGGCAGTT GAATAAACCT CTTGTCAAAG GAGGCTTTGT TGCTACCCGA ATATCTGTAA GTAATTGATG GCAAGATATC
TGCAGTTGTA ATTGTTGAGG TTGTCAAGAC AAGTATGACA TTTACACTGT TATATCAATG TACCTAGCAC CTACTAAATA
ACTTCTTGTC TAGATCCAAG TTGATAATAA AAAACTTAGT CCTATATTTG ACAGTGAAAA CTCGAAATTC TTTGCTTCCA
AATTTGGTCT AAATGTAGAT GATAAGCTCT TTCTAGTTAT TTTTGGGGGA TCTTATAAGT TCTAATTTGT AACCATAATG
GTTTATGAAG TGTTTTGCCA TTAATATTAC GACAGATGTC AAAATTGTAG AATTGTACTA TTGCTGCAAA AACCATAGAA
CATTTTGTTA AAAATTGAAG CTCTGGCCCT CAAAATTTAC CAATCCTGAG AAAGAAGCAT TCTGAATCTA ACATGTGGAG
ATGACAGTCT TTAATTTAAA AAGGGAGAAT TTGACTGGTG GCATGATGTC TGACATCATC TAGAATATAG TTTATGATGA
ATATATTTTT AGGGTCTACC ATAATTATCA AAGTTTAGAT TGTAAGCAGT AGATATATTT CTTATGAATA GAGGAGATTA
ATCAAGTAAG ATATCACTGA AGGGATGATT GGTTGGTGCA GTCTGGCATA CCGCAATGTA AGAAAGAAAG TTTGGGTCTC
CATCAGGGCC ATATTTTATA TATTAGAAGA AATTGGCCAT GTGGTATCAC TAGAGTGTTT TGATAATTTA ATTGTTTTTA
TTTTTAATTT TCCTTATATA TGTTTGGTCT GAAATTTTCA TAATCCTTAG TTATTATGAG AACATCTTTT TTCAATATTA
ATAAACTGTT TATGTACAAA TTAATTTCAG AATGAGAATT GTCTCTGTTG TTATCATTCT GTTTACTTTT AATTTCAGGT
AACCACTCTT AATCTGGAAA TTGTTAGAGC ACTAGCCAGA GGTAGTTTTG CAATTATTGT TATGTATATA TGACCACACA
TTCTTCTTAT ATCAGAGCAT TAGGCATTTA TCTTTTGTGT CAAACCTATA TGCCTTTAGA TTCATAATGT AGTTTATCAT
CTGTAATGTA CTCAATGTTA TCATGGCAAC ATGATGTAAA TTTCAAGTTT TCAGTCATAT TGGGATTTGG CTCACATGGT
TGTTGTCTAT CTTCTCCAGT CTTCTGTTCA TGTTTGGTTG CTATTCTGAT TTTACTAATG TGACATCTTC CTGGCTTTAT
TATTTTGGGC TGCTTGATAC TCTCCTTGCC TCCAACTTAA TGGAATGCAG AAAGCATAGA CTCTCCAGTA AATGTTAATC
TATGCTTTTA CAAAATCTGC AAGGTGAACA GAGTTAAACT TCTGCACTAA AAGTCAATAT GAAATTTTGC ATCTCTGAGC
ACTTTTTTGG CTTTACAATT ATTTCAACAC TGATAACCCA CTGATATGCG TTTCCACTAT AACTGGAGGT GCATATACTA
TTTCATCTAT TGAGTGAGGT TTCTATTTGT AATTGAAAAG TTGTGTATGC CATGAGCATT GGTAATTCTT GAGAAAATAA
AATTTAAACC TAACTCAACA TCACAAACTG ACTTAATAAA GTGAGGTTTG TATTCACTTA TATATTATAA TTTGATCATA
TCTCTAGTCG ATATGGAATC TTCAGCACAT CCCCTCAAAC TCAGGACTGG ACATCTCAAG CATGGAACTA GGGGAGAAAC
ATAATAGTGG ATGACATGAT TGGCTTAACA AACTTGACTT GGATGAATGT TGATCTGATC TTAAGAAAAT GGAAATTAAG
CTTAACTCAT CTTAAAAAAT GAAAGTGGAT TTTAAGCATA ATTTAACATC ACAAAATTGA CTTAGAGGTT TGCATTCACC
TATATATTAT TAATTTGATC ATATTTGTAG TCAATGTGGA ATCTCCAACA ATAATTATTA CCCAATCTTA ATACCCCGCT
GCTATCAGTT ATTCTGTTTC ATCCCCTTTA TTGGCTTTAT GTTCTTTGTA AAGTAATGAA ATTCATTCTA AAAGATATTT
GTTTCTCTGT GCAGAGGGAA TTCCTTCAAT TGGAATGTCA CCTTTCTCAT GTGGATGGTT AACCAGTGAG AGACATGTTA
GTAAATTTTT AACTGAATAT TTTCCAGATC ATACTCATCA ACATAATAAA TTGTAGACTT GTTTGTCTTC ATTTTCAGAT
AATAATATAT GTTAATGATC TAACTTCGTT TTCCACATGT GCAGATATCT TCAGCTGATT TATCTTCAGT GGCTAAGGCA
ATTGATTCTG GTTTTACACC TGTAAGAGCG AATGTTAAAT TTATTTCACT GCTTTAAAGC TTTTAAACAT TTTTCTACCC
TTCTAACCTT TCCTCATTGT CACATATAGA TGTTCTTTTG TTGTTTCTAA ATATCTTTTA GAAAAATAAT TGGTAGTACT
TAAAATGTGA AAGTAACTGT AAGATTATAA TGTCGGATCT GTGGAGCCCT ACTATATGTT ATACCAGTTG ATACATTGCT
TGTTGGGGAA TGGGTAGTTC CATCCGAAAA TATAGATTCA GTTTGGATAA TTTTCTTAGA AAGCACTTAC AGAAGATAAA
ATAAATCAAA CATTTTTGCA TAAATTAAAA TCAACTTATG GACTTTTTTC AAAAACTTCC TTATCTTTTT CATAAGCACA
ATGAACTTCC AGGAGTTATT TTGTATGTCA GAAATGAATT ACTTGTCTCA GTTGAATTGC TCCCATAAGC TAGAAGCTAA
TCCAAAATGG TTCATAGTTC CCAACAATGG ACTCTTTTCT TGAGTACTAT ATTATTCTTT ATGCAATGCC AAAAGCAAAT
GAATTGTTAT ATACAGCATT TAATGAAATA GAAAAAAAGT AGTTCTTTAT ATGTAAAATT TTAAAATCTG AACATAAAGT
TTTACTGCTA TCTTTTTTCT TTTGAATCTT ACTTTGAGGG TTCTAAATCT TGTAATTGTT TTTCTTCTAT TTTTTCCCTT
TGAATAACAT TGACCTCAGT ATATTTCTCT AGGTTCTGCA CGGAGATGCA GTGCTTGATG AGATTCAGGT AGAGACCAAG
TGTATTCAGT TTCATTGTTC CTTATTCACT AGCAATGGAG ATGGCATTTT AAGTTAGGTT GTTTTCAGGG ATGCACTATT
TTGAGTGGAG ATGTTATCAT AAGTCATCTG GCAGCGTACT CAAAACCTAA ATATGTTGTT TTTCTAGTAT CCTTTATATA
TCATTTGCAA CAATTTTTAT TCTTTAATTT CAACAGATAT AAGCTCTTTC TGAACATACC ATACCAAATA GTTTTCTAGT
TAGTGTATGA TATAGAGTTC CATTCATATC TCCAAATGAT GAATATCTTG AATATATTGC TAATAACAAC CTCAACTTTT
TATTGTCATT TCTCGCCACA TTTGTAATAC TCCAAATGGC TGAGAGCAGT TTAGCTATCA CAAAGGGTTG TATATAATAT
ATATATATAT ATATATATAT ATATATAATA TTTTTGAAGA CATTGCATGA ATGTTTTCCA TTAAATATGA CTCAGACAGA
TGTATATGGG GTATATGATC GCCCTCCAAC AGAACCTGAT GCAATACTCT TAAAGGAGAT TGGTAAGCAT TTGTTGCGTA
TATGATCTTG AATATGGTCT AATATCTTCA TGATTGGGTA TTATAAGAGA ATTTTCAACT GTTGTGACAG CTGTTGCTGA
CGATGGAAGC TGGTCAGTTG TAAAACCGAA GTTGCAGAAC TCAAGTGAGC AAACTTGGCA AATCAATATT CATTTTTCTT
TCTCTTCTAT TCTTTGGTCT GACAAATTTT GCAGTGGGGC AATTTCTGAA ATTATTAGTC CAGTAATTGT TCCAAGAAGA
ATTTTAGCAT TCACAATGAC TTAGTTATTC CTCCTTTCTT TCTGGTTATT TCTTCTGAGG GCTTAAATTG AACTGAAATA
TATAGAATGC ATTTTCTTGG CATGTGTTCT CTACAGTTGA ACTGACAGTT GCTGCTCATG ATACAACTGG TGGGATGAAA
ACAAAGATAT CAGAAGCTGC AATGATAGCA AAACACGGAA TTGATGTCTA CATTGTTAAG GTAATGTTTG TTACATTTGA
TCTGTTTGTG TTTTATGTCA GAACTACTAA TGTTGAAACC TTTGGCTGCA TTTTCAGGCA GCTACAAGCC ACTCACTAAG
GGCCTTAAAT GGAGATCTGA GAAGCAGCAT CCCTGATGAC TGGCTTGGGA CTGTTGTTCG GTCCTTGAGA TAAATCTGCC
TGACAAAATC TTTTGCATAG TTCTCAACCA TCAACAACAT GAAGTTGTAA CTTTTGGCCG CGTCATGAAT ATGAGTTGTA
TATCTAAATA ATACAACTTC CAAATCATGT GTCAAATGCT GAATGAATGA ATTACTGATA ATCATTTGAA ACTTTTCATT
TTATCCTAAA CTCTTCCATT ATGTGCTGTC AAGATTAGCT ACATGAATTA CTTGATGTCA GTAGACTTGA TTATAAACCA
AATTTTCAAG GAAATACAGT GTTTCTGTAA AATTGTTGAG TAGCTTATGT TGCTTATGCA AGTTGTGTCT GGCTACATCA
ATGTTTTTAA GTGCTTCCCT TGTATGAGTT GCAACACTTC ATTCCCAAAT ACATTGAAAC AAATTAACAT ATT

>Vigan.10G045700.01
TAAAAGTAAA AAACTAAAAT TGAAGTTAAA CCATGAAAAG ATAGTTAACT TGTGGACAGA TTCCACGACA TTAAACATCT
TTGATCGGTG AAGTAGGCGT GTGGAGAATC GGAGAAGGGG AATGGAGAAG AACAAGAATC AGAGCCAAAC ACTCACTTCC
TCACCCCTTT CTCCTTTCAC TCCATCAATC CGTTGCATAG TCAAACTCGG AGGAGCTGCG GTTACTTGCA AAGATGAATT
GGAGATGATA AATGAGGAGG TTCTTCAGAA GGTTTCAGAA CAGCTGAGGC AAGCTATGAT TGCATCTTCT GAGAAGCCTC
CCGGGATGGA TTGGAGCAAG AGACCTGGAG GGTCAGAAAT CTGTTGCAAT CCGGAAGAAT TTGGAGATCA TTCTGCTATG
GAATGTAGCC CTTTCATTGT GGTTCATGGA GCAGGTTCTT TTGGGCACTT CCAAGCTAGC AAATCTGGTG TCCACAAGGG
GCAGTTGAAT AAACCTCTTG TCAAAGGAGG CTTTGTTGCT ACCCGAATAT CTGTAACCAC TCTTAATCTG GAAATTGTTA
GAGCACTAGC CAGAGAGGGA ATTCCTTCAA TTGGAATGTC ACCTTTCTCA TGTGGATGGT TAACCAGTGA GAGACATATA
TCTTCAGCTG ATTTATCTTC AGTGGCTAAG GCAATTGATT CTGGTTTTAC ACCTGTTCTG CACGGAGATG CAGTGCTTGA
TGAGATTCAG GGATGCACTA TTTTGAGTGG AGATGTTATC ATAAGTCATC TGGCAGCGTA CTCAAAACCT AAATATGTTG
TTTTTCTAAC AGATGTATAT GGGGTATATG ATCGCCCTCC AACAGAACCT GATGCAATAC TCTTAAAGGA GATTGCTGTT
GCTGACGATG GAAGCTGGTC AGTTGTAAAA CCGAAGTTGC AGAACTCAAT TGAACTGACA GTTGCTGCTC ATGATACAAC
TGGTGGGATG AAAACAAAGA TATCAGAAGC TGCAATGATA GCAAAACACG GAATTGATGT CTACATTGTT AAGGCAGCTA
CAAGCCACTC ACTAAGGGCC TTAAATGGAG ATCTGAGAAG CAGCATCCCT GATGACTGGC TTGGGACTGT TGTTCGGTCC
TTGAGATAAA TCTGCCTGAC AAAATCTTTT GCATAGTTCT CAACCATCAA CAACATGAAG TTGTAACTTT TGGCCGCGTC
ATGAATATGA GTTGTATATC TAAATAATAC AACTTCCAAA TCATGTGTCA AATGCTGAAT GAATGAATTA CTGATAATCA
TTTGAAACTT TTCATTTTAT CCTAAACTCT TCCATTATGT GCTGTCAAGA TTAGCTACAT GAATTACTTG ATGTCAGTAG
ACTTGATTAT AAACCAAATT TTCAAGGAAA TACAGTGTTT CTGTAAAATT GTTGAGTAGC TTATGTTGCT TATGCAAGTT
GTGTCTGGCT ACATCAATGT TTTTAAGTGC TTCCCTTGTA TGAGTTGCAA CACTTCATTC CCAAATACAT TGAAACAAAT
TAACATATT

>Vigan.10G045700.01
ATGGAGAAGA ACAAGAATCA GAGCCAAACA CTCACTTCCT CACCCCTTTC TCCTTTCACT CCATCAATCC GTTGCATAGT
CAAACTCGGA GGAGCTGCGG TTACTTGCAA AGATGAATTG GAGATGATAA ATGAGGAGGT TCTTCAGAAG GTTTCAGAAC
AGCTGAGGCA AGCTATGATT GCATCTTCTG AGAAGCCTCC CGGGATGGAT TGGAGCAAGA GACCTGGAGG GTCAGAAATC
TGTTGCAATC CGGAAGAATT TGGAGATCAT TCTGCTATGG AATGTAGCCC TTTCATTGTG GTTCATGGAG CAGGTTCTTT
TGGGCACTTC CAAGCTAGCA AATCTGGTGT CCACAAGGGG CAGTTGAATA AACCTCTTGT CAAAGGAGGC TTTGTTGCTA
CCCGAATATC TGTAACCACT CTTAATCTGG AAATTGTTAG AGCACTAGCC AGAGAGGGAA TTCCTTCAAT TGGAATGTCA
CCTTTCTCAT GTGGATGGTT AACCAGTGAG AGACATATAT CTTCAGCTGA TTTATCTTCA GTGGCTAAGG CAATTGATTC
TGGTTTTACA CCTGTTCTGC ACGGAGATGC AGTGCTTGAT GAGATTCAGG GATGCACTAT TTTGAGTGGA GATGTTATCA
TAAGTCATCT GGCAGCGTAC TCAAAACCTA AATATGTTGT TTTTCTAACA GATGTATATG GGGTATATGA TCGCCCTCCA
ACAGAACCTG ATGCAATACT CTTAAAGGAG ATTGCTGTTG CTGACGATGG AAGCTGGTCA GTTGTAAAAC CGAAGTTGCA
GAACTCAATT GAACTGACAG TTGCTGCTCA TGATACAACT GGTGGGATGA AAACAAAGAT ATCAGAAGCT GCAATGATAG
CAAAACACGG AATTGATGTC TACATTGTTA AGGCAGCTAC AAGCCACTCA CTAAGGGCCT TAAATGGAGA TCTGAGAAGC
AGCATCCCTG ATGACTGGCT TGGGACTGTT GTTCGGTCCT TGAGATAA

>Vigan.10G045700.01
MEKNKNQSQT LTSSPLSPFT PSIRCIVKLG GAAVTCKDEL EMINEEVLQK VSEQLRQAMI ASSEKPPGMD WSKRPGGSEI
CCNPEEFGDH SAMECSPFIV VHGAGSFGHF QASKSGVHKG QLNKPLVKGG FVATRISVTT LNLEIVRALA REGIPSIGMS
PFSCGWLTSE RHISSADLSS VAKAIDSGFT PVLHGDAVLD EIQGCTILSG DVIISHLAAY SKPKYVVFLT DVYGVYDRPP
TEPDAILLKE IAVADDGSWS VVKPKLQNSI ELTVAAHDTT GGMKTKISEA AMIAKHGIDV YIVKAATSHS LRALNGDLRS
SIPDDWLGTV VRSLR*