GBrowse Details

Vigan.10G012000.01

Basic Information:
Name: Vigan.10G012000.01
Multiple alignment
Variant Information
Position: Chr10:1140354..1144379 (+ strand)
Length: 4026
Functional Information:
Description: Similar to Uncharacterized protein. [I1ND06, Glycine max]
InterPro: Mad3/BUB1 homology region 1 (IPR013212)
Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3 (IPR015661)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,5.48,1.42,4.33,2.30,2.68,2.64
Arabidopsis thaliana homolog: AT2G33560.2
Structure :
Position: Chr10:1140354..1140504 (+ strand)
Length: 151
Type: five_prime_UTR
Position: Chr10:1140505..1140707 (+ strand)
Length: 203
Type: CDS
Position: Chr10:1140798..1140857 (+ strand)
Length: 60
Type: CDS
Position: Chr10:1141837..1141981 (+ strand)
Length: 145
Type: CDS
Position: Chr10:1142063..1142220 (+ strand)
Length: 158
Type: CDS
Position: Chr10:1142594..1142678 (+ strand)
Length: 85
Type: CDS
Position: Chr10:1142771..1142834 (+ strand)
Length: 64
Type: CDS
Position: Chr10:1142915..1142969 (+ strand)
Length: 55
Type: CDS
Position: Chr10:1143187..1143346 (+ strand)
Length: 160
Type: CDS
Position: Chr10:1143466..1143548 (+ strand)
Length: 83
Type: CDS
Position: Chr10:1143883..1143960 (+ strand)
Length: 78
Type: CDS
Position: Chr10:1144051..1144114 (+ strand)
Length: 64
Type: CDS
Position: Chr10:1144115..1144379 (+ strand)
Length: 265
Type: three_prime_UTR

>Vigan.10G012000.01 class=Sequence position=Chr10:1140354..1144379 (+ strand)
GTAACGGCTA GTTGGTGAGA ATAAGCATAA TTTATATTTT CAAAATTTGA ATCACAAAAC CGAACACCGC TCCCTCTTCA
CCTTCAACAA GTTCTTCCCT TTTTCCCCTT TCCCTTCAGA GAGCGAAGAG AATCGTTTCA GTGCAGCAAC AATGGCGGAG
GCTGAGATCA AGAACACAAC AATCGATCCA GAGAGCGAGT TTCTGGCGTC GAAGAGAACC AACGGTAACG AGTGGGAGAT
CTTCAAGGAG AACGTGAGGC CGCTGAAGCG AGGCCGCAAC GTTAACCTCC TCAATCACGC CCTCAAATCC CACACCCACA
CTCACCTCAA GAAATCCATC CTCCAACATC GAAGGTTTAT TCTCTCTCTC TATCTCTTTC TTTCACTCTT CTTCCTTCTC
TTTCTGATCT CTTCTTCATC TCACTTCTGA ATTCCTTTCG ACAGGAAACT CATCGAAGCC ATCGACGAAT ACCAGGGAGA
CGACCCTCTC CTCCCCTGGC TAGAGTCAGT TCCTGCATCC CTCTAACTTT TCTATTCACC TTTTTTATTT CCACCACACA
AAAATGGTTA ATTATCAGTT GAATCATCTT TTTATTTATT ATTATAATAG TGTAAATTAG CATCGTGGAT TAATCGTAGT
GATTGAAAAA GGAAAAAAGA TGCTTGTTTT GTAGTAAATA ATTCTGGGTC TCATTATAGC TCAATTTGGT GCCTCTCTTG
GTGGGGGTTT GGAGAGTTTG TATGGTGTTC AAGGTTGAAA TTTCATTTTT GTCGTTATAC ACACTAAAAT TAATTGTTTC
CACATGTCCT AATTGAATTC CCCCACACGA ACTCCAAAGT ATGTATCCGG TACCTCAAAT TATTCCTTTT TTTAGTCAAA
CAACTCAGAT TACTTCAGTT TAACTAATAT GATGATGGGA AGAAAATGAA TCGGTTAGTG CGAAAATAAT GAAAAAATAC
TATTAAAACT AAAGAGAAGC TAAGATATAA ACATTCATGT TCTTCAAGAA TGATGGATAG GCTTTGATGC AACATAATTC
AGAAAAGATG AACAAATCTA TCCAAGAGAT TACTTTCAAC CCCTTGAAAT CTTAACAATA TCTCATCACT TATTGAGGAC
ACACCTATTG GTGCACATAA TTGATAGGTA AAGAGACAAA CATTTATATA ACCAAAAATG CACCAGCAGT TAAATGAGGA
TCCTACAAGT GTCATCATCT AACTTTTGAA AATTAAAATG TAAAATGAAA AATATTCTAA TTATATCGTG TAAGATCTTT
TGACCACTTA ATTCTTTATT TTGGATCTCT GTGCCCCATT GTATCATGAT ATTTTAGTGT AATTTTTGCA TTAGTAAGAG
TAGAGGATTT ATAGGTACAA TTAATTAAGA AATTAAGATG TACTAAATTA TTAATAATAA TAATAATAAT AAAATAATTG
AGAAGAGGAC AGAGTTTTTA TTGAAGTTAT TGTAATGTTG AAGGTGTATC AAGTGGGTTC AGGAAGCGTT TCCTCCCGGT
GGAGACAGTT CCGGGCTGGT GGTGATTTAT GAACAGTGTG TGCGTGCCTT TTGGCATTCA GAGCGCTATA AGGATGATCT
GCGCTACCTC AAAGTGTGGC TTGAATATGT GGGTGCTCTA GTGACACTCT TGTGTGTATC AATGTGGTGG TTACTTCAAT
TATTTGTGAC AATTTAAGAA ATGTTGCAGG CAGATAATTG CTTTGATGCA GAAGTTATTT ATGCTTTTCT GGATGCAAAT
GGAATTGGAA AATCTCATTC CAATTTCTAC GTTTCCTATG CTTTGCACTT GGAATCTAAG AACAAGTTTA AAGCTGCCAA
CCAGATATTC GAGCTTGGCA TATCCAGGTA AGGACGCTAA TCTTTTGGAG CTTGTGAATG AAGTCTTTTC TGGTTTGATA
ATAGTTAGTT ATATTGTGGA TATTTGGATA ACATTAAGAA GTACTTCTGG TTTTTAAACA GATACCCTTT GAATGTTTTG
GTCTGAAAAG TATTTTTGGA CGGGGACTAA CTTAACTCAA ACATTCTAAA AACAGTTGAA TAACTCCAAG TGCTTTTCCA
TGTAAGCAAA TTTGGGGTTT GGACTTTGTG GTTCACAATA CAAGTGTTTG GTGGTTTTTT GTATCAGCAT CTCGTACTTC
TTTGATGTCG TATTTTCCTA TGAACTTTGA GTTGCAAACT TGCAAATGCT ATATCCCTCA TTTGATTACT CATTTTGAAG
GAATGCTCAA CCAGATGACA AATTGAAGGC TGCTTACAGA AAATTTCTTG CACACTCGCT GGCAAGGTCA ACAACAGCTA
AAGATGTATG TGGTGTTCAA CTTGAGTGCT TCTTTGAAAC TGTTTTTAGT TGCAAAATGA TCTTTTGATG TATCTATTAT
ATTCTTCTGC TGTCTAGGAT TCAGTAGAAA AAGTGGCACC CTCACGTAGC TTTGGAACTG TTCTTGGCAA TCGAGAAAAT
CGTGAGTCCT TTACTTGGTG CATAATCATT TGTTTCAAAA TCATGAATTT GAATTCTGAA CATCTATCCC TGTGGTTCCA
GGTTCTTCCC TGTCCACTTT GACCACGAAC TGTGATCTTT CTGCTAAGAA TGATAGGTAA TATGATTGTT TCTCTGTTTT
TATTAAGTTG GAGTATGCTA TGTGATGGTT ATTTTTTGAA TTGCACTCTT CAGTTTTCTC TTGTAGAGAA ATATATGAAA
ACTTAACTCA AAACTCAGGC AATATTCCTA TGTGAAAGGT TTCTCGGCTC CTGTGAATAT TTTTATTTAG AATTCTTGAT
GAATGTCCAT CATATTATTC TCTCTTCCTG TAGGATTCGA GCAGCTCCAT TTTCCATCTA TAAAGATTCA GCTGCAACTG
GTGAAACTGA TCCCCATCAT CCAGACCAAT CGCACTCTTG GCACACACTT GGAGCTCGAG CTGACAGAAA TAAGGAAAAC
AATCCTATTC CTGGGAGGTG GGAATCCTTT AAGGTACTAA TTTTCAACCT TTTGCTTGCG TTTCATTGTT GACTATAATA
ATCTTACAAA GCTGTACTTT ATTACCCAAG TTGTTGAATG ATTTCAAGGG TGTGCTACTC CAATGATTTC AGGTTCCACA
GCGAGTTGGA ACAAGAGCTG GAGGGGCTAC TCCAAGTGCC TTTATCCCAG TTTTTGTTGA TGAAGAATGT CAAGAGTAAG
TCGAATCTGC ACAAAATCAG TTTGGCTGCC AAATTTACGT TGAGATGTTT CTTAATTGGC CACAAACACA AATTTCCTTT
AAAAAAATGG GGTTAAAAAA AACACTATTC TTTAATTTTT CATATTAGCA GTACACAACT TGTCCTTTTT CAGTTACTAC
CGGTGATGAG ATAGTCACAA AAGAAGTTGT CTAACAATCA GAGTAAATGA AGGGACTAAA ATCATTTTTT ACCAAAACAT
AGGAACATCA AACATATTTT ATAAAGCAAG AGATGATGTT ATTCAGTGAA ATGAAGGTTT ATGTGCTTCT GGTGTACTTT
GATTGGCAGT TCACAAAGTA CAAAAGAAGA GGGCCCTAAG TGCACAAGTT TGAAGATTAA GCAGGATGAC GACAAGGAAT
TGAAAAGGTA ACTTCACGTG GCAATATTTG GTTACAGATG ATTGAGCAGG GTCCTGATGA ATTAATTGAG ACATGCATGT
ATGGTTCTTC CTTTCAGGGA AACAGAACTA CTAAGGAAGA ATCCACTACG CAACTTTCCT CAGAACAGCC TCCCCAGATA
ATTCATTCAA CCTCTTTGAG AATGTCATCG TTTCTTCAAT AATTTTGGCT CAGCTTTCCC CCTAGAAAGC TTTGACCCAC
ATTTACTTTA AGTTGGTACT GGTATTTGTG GTTAAAAACG ATGTCCGAAT TGTTTGGTTA AGAAAATTTT AATGTGTGAA
CTGGACATTA CTTCGAATCA ATTCAGTTCA TTGGCAAAAC TCTAATATTT GTAATTATTA TTATTCTGAA ATGTTATTAT
TATTATTTCA TTATGAATAA CAAAAA

>Vigan.10G012000.01
GTAACGGCTA GTTGGTGAGA ATAAGCATAA TTTATATTTT CAAAATTTGA ATCACAAAAC CGAACACCGC TCCCTCTTCA
CCTTCAACAA GTTCTTCCCT TTTTCCCCTT TCCCTTCAGA GAGCGAAGAG AATCGTTTCA GTGCAGCAAC AATGGCGGAG
GCTGAGATCA AGAACACAAC AATCGATCCA GAGAGCGAGT TTCTGGCGTC GAAGAGAACC AACGGTAACG AGTGGGAGAT
CTTCAAGGAG AACGTGAGGC CGCTGAAGCG AGGCCGCAAC GTTAACCTCC TCAATCACGC CCTCAAATCC CACACCCACA
CTCACCTCAA GAAATCCATC CTCCAACATC GAAGGAAACT CATCGAAGCC ATCGACGAAT ACCAGGGAGA CGACCCTCTC
CTCCCCTGGC TAGAGTGTAT CAAGTGGGTT CAGGAAGCGT TTCCTCCCGG TGGAGACAGT TCCGGGCTGG TGGTGATTTA
TGAACAGTGT GTGCGTGCCT TTTGGCATTC AGAGCGCTAT AAGGATGATC TGCGCTACCT CAAAGTGTGG CTTGAATATG
CAGATAATTG CTTTGATGCA GAAGTTATTT ATGCTTTTCT GGATGCAAAT GGAATTGGAA AATCTCATTC CAATTTCTAC
GTTTCCTATG CTTTGCACTT GGAATCTAAG AACAAGTTTA AAGCTGCCAA CCAGATATTC GAGCTTGGCA TATCCAGGAA
TGCTCAACCA GATGACAAAT TGAAGGCTGC TTACAGAAAA TTTCTTGCAC ACTCGCTGGC AAGGTCAACA ACAGCTAAAG
ATGATTCAGT AGAAAAAGTG GCACCCTCAC GTAGCTTTGG AACTGTTCTT GGCAATCGAG AAAATCGTTC TTCCCTGTCC
ACTTTGACCA CGAACTGTGA TCTTTCTGCT AAGAATGATA GGATTCGAGC AGCTCCATTT TCCATCTATA AAGATTCAGC
TGCAACTGGT GAAACTGATC CCCATCATCC AGACCAATCG CACTCTTGGC ACACACTTGG AGCTCGAGCT GACAGAAATA
AGGAAAACAA TCCTATTCCT GGGAGGTGGG AATCCTTTAA GGTTCCACAG CGAGTTGGAA CAAGAGCTGG AGGGGCTACT
CCAAGTGCCT TTATCCCAGT TTTTGTTGAT GAAGAATGTC AAGATTCACA AAGTACAAAA GAAGAGGGCC CTAAGTGCAC
AAGTTTGAAG ATTAAGCAGG ATGACGACAA GGAATTGAAA AGGGAAACAG AACTACTAAG GAAGAATCCA CTACGCAACT
TTCCTCAGAA CAGCCTCCCC AGATAATTCA TTCAACCTCT TTGAGAATGT CATCGTTTCT TCAATAATTT TGGCTCAGCT
TTCCCCCTAG AAAGCTTTGA CCCACATTTA CTTTAAGTTG GTACTGGTAT TTGTGGTTAA AAACGATGTC CGAATTGTTT
GGTTAAGAAA ATTTTAATGT GTGAACTGGA CATTACTTCG AATCAATTCA GTTCATTGGC AAAACTCTAA TATTTGTAAT
TATTATTATT CTGAAATGTT ATTATTATTA TTTCATTATG AATAACAAAA A

>Vigan.10G012000.01
ATGGCGGAGG CTGAGATCAA GAACACAACA ATCGATCCAG AGAGCGAGTT TCTGGCGTCG AAGAGAACCA ACGGTAACGA
GTGGGAGATC TTCAAGGAGA ACGTGAGGCC GCTGAAGCGA GGCCGCAACG TTAACCTCCT CAATCACGCC CTCAAATCCC
ACACCCACAC TCACCTCAAG AAATCCATCC TCCAACATCG AAGGAAACTC ATCGAAGCCA TCGACGAATA CCAGGGAGAC
GACCCTCTCC TCCCCTGGCT AGAGTGTATC AAGTGGGTTC AGGAAGCGTT TCCTCCCGGT GGAGACAGTT CCGGGCTGGT
GGTGATTTAT GAACAGTGTG TGCGTGCCTT TTGGCATTCA GAGCGCTATA AGGATGATCT GCGCTACCTC AAAGTGTGGC
TTGAATATGC AGATAATTGC TTTGATGCAG AAGTTATTTA TGCTTTTCTG GATGCAAATG GAATTGGAAA ATCTCATTCC
AATTTCTACG TTTCCTATGC TTTGCACTTG GAATCTAAGA ACAAGTTTAA AGCTGCCAAC CAGATATTCG AGCTTGGCAT
ATCCAGGAAT GCTCAACCAG ATGACAAATT GAAGGCTGCT TACAGAAAAT TTCTTGCACA CTCGCTGGCA AGGTCAACAA
CAGCTAAAGA TGATTCAGTA GAAAAAGTGG CACCCTCACG TAGCTTTGGA ACTGTTCTTG GCAATCGAGA AAATCGTTCT
TCCCTGTCCA CTTTGACCAC GAACTGTGAT CTTTCTGCTA AGAATGATAG GATTCGAGCA GCTCCATTTT CCATCTATAA
AGATTCAGCT GCAACTGGTG AAACTGATCC CCATCATCCA GACCAATCGC ACTCTTGGCA CACACTTGGA GCTCGAGCTG
ACAGAAATAA GGAAAACAAT CCTATTCCTG GGAGGTGGGA ATCCTTTAAG GTTCCACAGC GAGTTGGAAC AAGAGCTGGA
GGGGCTACTC CAAGTGCCTT TATCCCAGTT TTTGTTGATG AAGAATGTCA AGATTCACAA AGTACAAAAG AAGAGGGCCC
TAAGTGCACA AGTTTGAAGA TTAAGCAGGA TGACGACAAG GAATTGAAAA GGGAAACAGA ACTACTAAGG AAGAATCCAC
TACGCAACTT TCCTCAGAAC AGCCTCCCCA GATAA

>Vigan.10G012000.01
MAEAEIKNTT IDPESEFLAS KRTNGNEWEI FKENVRPLKR GRNVNLLNHA LKSHTHTHLK KSILQHRRKL IEAIDEYQGD
DPLLPWLECI KWVQEAFPPG GDSSGLVVIY EQCVRAFWHS ERYKDDLRYL KVWLEYADNC FDAEVIYAFL DANGIGKSHS
NFYVSYALHL ESKNKFKAAN QIFELGISRN AQPDDKLKAA YRKFLAHSLA RSTTAKDDSV EKVAPSRSFG TVLGNRENRS
SLSTLTTNCD LSAKNDRIRA APFSIYKDSA ATGETDPHHP DQSHSWHTLG ARADRNKENN PIPGRWESFK VPQRVGTRAG
GATPSAFIPV FVDEECQDSQ STKEEGPKCT SLKIKQDDDK ELKRETELLR KNPLRNFPQN SLPR*