GBrowse Details

Vigan.09G232700.01

Basic Information:
Name: Vigan.09G232700.01
Multiple alignment
Variant Information
Position: Chr09:37153039..37154502 (+ strand)
Length: 1464
Functional Information:
Description: Similar to Uncharacterized protein. [I1KG37, Glycine max]
InterPro: Protein of unknown function DUF1754, eukaryotic (IPR013865)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:55.21,31.78,21.23,23.47,28.05,44.81,25.07,23.69
Arabidopsis thaliana homolog: AT1G16810.1
Automatic updates:
Name: NM_001250259 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500638 (LOC100500638), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:37153039..37153373 (+ strand)
Length: 335
Type: five_prime_UTR
Position: Chr09:37153374..37153521 (+ strand)
Length: 148
Type: CDS
Position: Chr09:37153872..37154137 (+ strand)
Length: 266
Type: CDS
Position: Chr09:37154138..37154502 (+ strand)
Length: 365
Type: three_prime_UTR

>Vigan.09G232700.01 class=Sequence position=Chr09:37153039..37154502 (+ strand)
CTTTAGAAAG GCATGTAAGA TTAAGAATTT GAAATCTATT TGAGTCCTAG AGATCGGAAA GTTTCACAGG TGTCTGCGTT
TATGTTATTG GTGCGATTCT AATTCCTATC ACTTTCTCAA CCTTTTCGAT TTAATGATTT CAATGTTTGT TCAAATTCAA
ATTATGTCAT TCTTTAACTG TTATAGCTCT TTCCGTGCAA ATCCACAGAT TAGGGTTTTT GTCAGTACCC CTAAATATTC
ATCTACCTCA CCGCCGGTCA TTTCGTTCCT TACTTTGTAG AGATTTTCTT TTGAAAAAGA TTGTCTTCAA TCGTGTTTTA
TTTTTTGGGA CAGAGATGTC ATCGTATGAC AACGTTGTTG GTGGGAAATT GAAGCTGAAG GGGAAAGCGC TGGATGTGGC
GGGTGGGGTG AAGAAGAAGA AAAAGAAGAA CAAGAGAAAC CAAGATCAAC TTCTGCAAGT TGCCGAAGAT GAAATTTCAG
CAGGTTGATT ATCTTTGTTC TTTTGGTTAT GGCTGACTAA AACATAAAAA ATTTGTATGT GTTTTGTGGT CAAGGTAGCG
ATTGCAACAA TAATCTTAAT CGTGTCAAAC CCTTCAATTT ATGTGTACTT CCTTGAAGTG ATGTATATAT ATTTTTTGTT
GCCCTTATTA AGTATGATAA GTGGCAATGT TTTATGAAAA CTTTGAATAT GAACGATAGC ACTTAGATAT CAAAACTTTT
ATCTGAGCTT TGAGTAAGCA GACAAGTGTT CTGTCTTTGT CCATTTTCTT TGATGGCTGT GTTTAATTGA CCATACATTA
TGGTGTATAT ATATGTAATG GTATTTGATT TAGGTGGAAG CGCAGAACAA GGTAAAGATT CTAATGAGGA GGATACAAAT
ACGGAGAGGG AAATGAGCAG TGGGAAAGGG AAGGTTGCCC ATTATGATGA TCATCTTACT CCGGCAGAGA GGAGATACAT
TGAGCAGAGG GAGCAACTTG ATGTTCACAG ATTGGCCAAG ATTTCTAATA AATCTCACCG TGATAGAATT CAAGATTTCA
ACCAGTATCT TGCAAACATG AGCGAGCATT ATGATATTCC TAAAGTTGGT CCTGGATGAT TGGTTCAGTG CGCTTTGCGA
GTATGAAGCC AAATCCTTAT CACTTGTACT TGTTGGTTAA TTTCAATGGC AGTGTGCCCT CACAATGGTT ATTGTCACTT
TACCTTCATA CTTTGTTTTG GACCAAATTG TATTTCCTAT AATGTGTATT TCTTTTCTCT TCCTGTCCAT GGAGAGCTAT
GTTGTTGCCT TCAACGAAAT TTGTCTTTTT TTTATTTATT GTGCAAGGGA AAATGCATGA TGCACATAAG CTGCTGATAA
GGCTGGAAAT GTTTAAATCA TAGTATGTCA AATAGTTTTA GTACATATTA CATTGGAGCA TTTCTTTATT AAAAGTACAG
AATAATCATT CTACGTTAAA TAAA

>Vigan.09G232700.01
CTTTAGAAAG GCATGTAAGA TTAAGAATTT GAAATCTATT TGAGTCCTAG AGATCGGAAA GTTTCACAGG TGTCTGCGTT
TATGTTATTG GTGCGATTCT AATTCCTATC ACTTTCTCAA CCTTTTCGAT TTAATGATTT CAATGTTTGT TCAAATTCAA
ATTATGTCAT TCTTTAACTG TTATAGCTCT TTCCGTGCAA ATCCACAGAT TAGGGTTTTT GTCAGTACCC CTAAATATTC
ATCTACCTCA CCGCCGGTCA TTTCGTTCCT TACTTTGTAG AGATTTTCTT TTGAAAAAGA TTGTCTTCAA TCGTGTTTTA
TTTTTTGGGA CAGAGATGTC ATCGTATGAC AACGTTGTTG GTGGGAAATT GAAGCTGAAG GGGAAAGCGC TGGATGTGGC
GGGTGGGGTG AAGAAGAAGA AAAAGAAGAA CAAGAGAAAC CAAGATCAAC TTCTGCAAGT TGCCGAAGAT GAAATTTCAG
CAGGTGGAAG CGCAGAACAA GGTAAAGATT CTAATGAGGA GGATACAAAT ACGGAGAGGG AAATGAGCAG TGGGAAAGGG
AAGGTTGCCC ATTATGATGA TCATCTTACT CCGGCAGAGA GGAGATACAT TGAGCAGAGG GAGCAACTTG ATGTTCACAG
ATTGGCCAAG ATTTCTAATA AATCTCACCG TGATAGAATT CAAGATTTCA ACCAGTATCT TGCAAACATG AGCGAGCATT
ATGATATTCC TAAAGTTGGT CCTGGATGAT TGGTTCAGTG CGCTTTGCGA GTATGAAGCC AAATCCTTAT CACTTGTACT
TGTTGGTTAA TTTCAATGGC AGTGTGCCCT CACAATGGTT ATTGTCACTT TACCTTCATA CTTTGTTTTG GACCAAATTG
TATTTCCTAT AATGTGTATT TCTTTTCTCT TCCTGTCCAT GGAGAGCTAT GTTGTTGCCT TCAACGAAAT TTGTCTTTTT
TTTATTTATT GTGCAAGGGA AAATGCATGA TGCACATAAG CTGCTGATAA GGCTGGAAAT GTTTAAATCA TAGTATGTCA
AATAGTTTTA GTACATATTA CATTGGAGCA TTTCTTTATT AAAAGTACAG AATAATCATT CTACGTTAAA TAAA

>Vigan.09G232700.01
ATGTCATCGT ATGACAACGT TGTTGGTGGG AAATTGAAGC TGAAGGGGAA AGCGCTGGAT GTGGCGGGTG GGGTGAAGAA
GAAGAAAAAG AAGAACAAGA GAAACCAAGA TCAACTTCTG CAAGTTGCCG AAGATGAAAT TTCAGCAGGT GGAAGCGCAG
AACAAGGTAA AGATTCTAAT GAGGAGGATA CAAATACGGA GAGGGAAATG AGCAGTGGGA AAGGGAAGGT TGCCCATTAT
GATGATCATC TTACTCCGGC AGAGAGGAGA TACATTGAGC AGAGGGAGCA ACTTGATGTT CACAGATTGG CCAAGATTTC
TAATAAATCT CACCGTGATA GAATTCAAGA TTTCAACCAG TATCTTGCAA ACATGAGCGA GCATTATGAT ATTCCTAAAG
TTGGTCCTGG ATGA

>Vigan.09G232700.01
MSSYDNVVGG KLKLKGKALD VAGGVKKKKK KNKRNQDQLL QVAEDEISAG GSAEQGKDSN EEDTNTEREM SSGKGKVAHY
DDHLTPAERR YIEQREQLDV HRLAKISNKS HRDRIQDFNQ YLANMSEHYD IPKVGPG*