GBrowse Details

Vigan.09G204000.01

Basic Information:
Name: Vigan.09G204000.01
Multiple alignment
Variant Information
Position: Chr09:34975483..34979973 (+ strand)
Length: 4491
Functional Information:
Description: Similar to hydrolase C777.06c-like isoform X1. [XP_003531613.1, Glycine max]
GO: Molecular Function: hydrolase activity (GO:0016787)
InterPro: Beta-lactamase-like (IPR001279)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.82,2.89,14.78,14.27,16.58,8.47,9.62,12.41
Arabidopsis thaliana homolog: AT3G13800.1
Automatic updates:
Name: NM_001255877 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative hydrolase C777.06c-like (LOC100786919), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:34975483..34975556 (+ strand)
Length: 74
Type: five_prime_UTR
Position: Chr09:34975557..34975677 (+ strand)
Length: 121
Type: CDS
Position: Chr09:34975882..34976015 (+ strand)
Length: 134
Type: CDS
Position: Chr09:34976129..34976241 (+ strand)
Length: 113
Type: CDS
Position: Chr09:34976800..34976841 (+ strand)
Length: 42
Type: CDS
Position: Chr09:34977347..34977402 (+ strand)
Length: 56
Type: CDS
Position: Chr09:34977529..34977605 (+ strand)
Length: 77
Type: CDS
Position: Chr09:34978576..34978695 (+ strand)
Length: 120
Type: CDS
Position: Chr09:34978863..34978939 (+ strand)
Length: 77
Type: CDS
Position: Chr09:34979035..34979098 (+ strand)
Length: 64
Type: CDS
Position: Chr09:34979214..34979264 (+ strand)
Length: 51
Type: CDS
Position: Chr09:34979344..34979392 (+ strand)
Length: 49
Type: CDS
Position: Chr09:34979612..34979730 (+ strand)
Length: 119
Type: CDS
Position: Chr09:34979731..34979973 (+ strand)
Length: 243
Type: three_prime_UTR

>Vigan.09G204000.01 class=Sequence position=Chr09:34975483..34979973 (+ strand)
ACACAACACA CGTGTGTAAT TGTTCGTGTG ACTGACACAG ACAAACACTG CACAGACATT GAATCGATCA ATCAATGGTG
CTTGCGTCCA TTCGTCTTTT TCCTTCTCCA TTCCTCGCTT TCGCTCCTCG TCGCTCTCCA TATTCATGGC GCCCTCGTCC
CTCTTCCGTC GCCGCCTTCT CTTCTCTCCA CTCCTGTAGC CATTCAGTTT CCACTATATT CTTTTTCGCA CAATGCCTGC
TCACTTTAAC CTATTTTTTC TATTGGAACC CTTTTCTATG TTGAAATTCA CACATTTTTT TTCTTTTTCT GAAAAGATGA
AATCAATAAT CTGTTGATTT ATGCATCACT AAGCTGTTAC TTGCAGATAG TGTTGACTTG TGAGTTCATG TTGCTGCAGC
GGCTTCTAAG GGAGACGGCG GAGTGGAACT AGGTGGTGAT CAAAGACAAG CAGAAGTTAT TTTTTTGGGG ACTGGAACCA
GTGAAGGGGT TCCTCGTGTT AGTTGCTTGA CTAACCCTTT AATTAAATGT GAGGTACTTG TCATTATTCA ACCAGACCAT
GTTTTTATAA TTGATTATGA ATATGATATG ATGCTATGGA ATTGGATCAT TGGGGTTTAT TGGTTTTGGT ATGATGTTTT
TTACAGGTGT GTTCAAAAGC TGCCCAACCG GGAAATAAGA ATAGGAGACT TAACACAAGC ATTCTCATTC GTCACCCCAA
TTCTTCAGGA ACACAGAATA TTCTTATAGA TGCTGGAAAG TATGTTTTTA ATTGTCCTAT GTGATGTGCA CTGCAATTGT
GTTGGATTAG GAGTTAGGAG GACGGGATTT ATCTTACTTT CATTTTGAAT GTTAGTCTAT ATCTGCGATC TCATGGTGGT
TCTAGGTTGG CCCCTTATTG TACTTTCTTT TCTTTTTTGA GCTTGAAAAA ATCTGCTGGA ACATGGAAAA ATTAATACTT
GGCAATTTTA GCTTTCCTTT GATACAATGT TTGTATAATT GGTATTGTAT TTGTATACTG AAGCCCAACA TTGATCCATT
AACAATGTCA TGATTGTGGG TGTCAGCGAG TATTTTCTTG TTTCTCTCAA AGATAGACTT GTATATGTGG ACTGGATTCT
AAGTCTGCGT TGCCCCGTCA TGGGATGATA TATGCTGTGT TAGGATAATG TGATGTCTGA ACCATGAATA TGTTGTAGAT
TTTTATTATT GTAAGATGGG ATTTACATAA TTTGAGTTCA CTTTCAAGGA AAACCTGGAC ATGATTAGAT TATGTGCTTC
ATTTGGGTGC TGATAACAAT TAACTTACTT GTTGCAGATT TTTCTATCAC AGTGCTCTCC GGTGGTTTCC TGCTTATGGG
TTAGTTTTTA CCTGTTATTA ACGTTGTTAC ATGTGATGGG TTTTCTGTTT ATGTATTTTA TTTTTTGCTT TCTTTTTAGG
AAAAATATGA TGCAACATTA ATAACAATGG TAGTGAAAGG ACATGCAAAT TAGAAAACGA AACTTGCATA AACTATGTGT
GGTATATACA CAATTTTGGA CTGTTGACGA AATTGTTTAA GGTTATCCTA TGGTTTGCAT AGAAGTCCGT AAGGAGTGTA
CCGGTGTAAG ATTTTGCAAG CATCAATACC CATGCAAAAT GAATTGGACT TGTCAAATAT CTGGAATGAG TTTTTAATGC
TAAACTATTT AAGAGAAAAT AATCTTAGAA GACTTGTACG TCTGTGACAT TTCTTGTTTG ACATGCTTTT TTATTGAGGA
ATCTTGATTA TTGACCCTAA AATTTAAGTA GTAGATGGCG TTCTACATGT TTTCTTGTAT TTTTCTGCCT TGGTTTTATA
TCTCTGTAAC CTGTATATCT GCAGGATAAG AACAATAGAT GCTGTCATTA TTACTCATTC ACATGCTGAC GCAATTGGAG
GTCTGACATG ATCTTTAATA ATATTCTTTG GATAATTAAT ATCAATACGA CATGTACATG CTTGGCTAAA GTAATAAGAA
ATGTAATTGG TAATATAAAC AAACTCTGCT TCTTTCTTCT ACCCAGGTCT TGATGATCTC AGAGATTGGA CAAACAATGT
TCAGCCTCAT ATTCCAATAT ATGTAACCAA ACGAGACTTT GAGGTCCTCT TCCATGTGCT TTCCTTCTAA ATCCAAGTTA
TTAATTTTAC TTACTGCTTG TTATCTGTAT GTGTACGCTG TAAATTTTCT TTCTGTTTGA AAGACCTGCA TATCTATGTA
TCCTTTTTAA GAAATTAATG CATACTGTAA GAAATCTTGA ATTTGTGCAT ATTGATGTTC ATTCTTTCTC TGGGATTGCC
AAAGTATCCA CAACTGATGT TATTGAAGTA TATTTTATAT ATATCTACTT AATGCTAATG AATCTCTGCA TCCGCTTTAA
CATTTACTCC ACAGAAATTC ATTTTAAGTT AGAAAATATT TATCACTAGC TGTAGTTAAA ATTTGAGTAG GGTTAAAAGG
TGGATTTAAC TATACCTACC GAAACTAGCC GACTGAAAGT TAATAATAAT TGCCATCTGA AGAAATCAAA TCTTCCTCTT
CCGATATGGG CTGAGGACCT GGAAATTTTG TACCAGAATA TCCTGTCCAA TATCTCCAGA GGCTCAGTCT TTTCTAATTT
GCATGATGGA ACAATTTTTT CACTATACTA GCTTCTGAAA TCATGTCTAA GAGAGAAGAG AAAGAGCTCA TCCTGCATAT
ATTCATGATT GTTCCCATAA TCTACACTTT TTAAGACAAT TGTCATTATG TAGATTTCTG TTAGCTGAAA AATAAAGATG
TTTTAGGGAA ATTTTCTTCA TTTTCAAATA TTTTTATTTT TATCTTCCAG GCTAGATCAT AGGGTTTACT TGTCATCTGA
TTGGATATTT AATTTCTTCT GAGCTGCGGA TCGGAGTTCC TCTTAATAGC ACTTGTAGCA CTACCCTATA GTGAAGGGGA
AATGCAGTGA AAGCTTGTGC TTTTCATTTT CAATGATCCT CTGAATCATT CACCTTTTTC TACTTCAATG AGCAACTGGT
GGGATATGTT TTTATAGTGA ACTTATTCTT GCAATCGCTA CTGAAAAGTG CAGGTGATGA CAAAGACCCA TTATTATTTA
GTAGATACTA GTGTTATCTT ACCTGGTGCC AAAGTCTCAG AGTTGCAATT CAAAATCATA TCGGAAGAAT CATTTTTTGT
ACACGGACTG AAGGTCAGTA CCATTATTAG TCCTAACATC TTCAAGTGGG GTGTTCTCGT ACTTTGTCCC TTTTCAACTT
TTTTTCTCAC TTATTGCTCA ATCAATTAAT TTCTAGCGTG TTCCTTCTTG TGGATGGGGC TTGGCTCTAT TCTTTTTTTC
CTTCTATTAT TGTACTTCAG ATTACCCCAT TACCAGTTTG GCACGGCCAG AATTATAGGT CCCTTGGTTT TCGTTTTGGT
AATATCTGTT ACATTAGGTA ATGTTTCTAC TTAAGTAGAA AAGTACTTGC ATATGATTCA GTTCAGCCTT TTCATCTATT
TATGTGGGCT GATCTTGTCT CTAAATTTGC AGTGATGTTA GTGAAATTCC TGAAGAAACT TACCCACTTC TAAAGGACTG
TGAAATTCTA ATCCTGGTGA TATACCCTCC CATCCTTTTT ATCTTTCCAC AGCTTTTCTT TATACTTACA TGAAATAACT
GTGAGTGCAT GTATGATTTC TCCCTCACTC ACATAGTGTT TGATTCCACA GGATGGATTA AGACCTGATC GTTCTACTTC
CACACATTTT GGACTTCCAA GGGTAATAAA CTAATAATCA GCTTTACATT TGCTTAAACT TTTCTCTTAG GAAGGAGATT
TATTCTGATC TTCCATTTCA GGCGTTGGAG GAAGTGCGAA AAATTCAACC CAAAAGAACA CTTTTTACTG GTAAGTTTAG
CTTAAGTCCT CCAGTTATCA TAATGCTTGC ACTACTTTCT TGCCTTAATC TACGATGGTT CATTAATCAT GCATTTAGGA
AGCCTGAAAG AACCCCTTAA GAAGTTCGAA ATTAGTAAAT AAAAAAATCT GAGGCAGTTA GTAATATATC ATCAATGTAA
AATGTTTAAG AGAAATAGTT TTCGATGTCT CCTTATTGGT TATTTGAAGG TATGATGCAT CTGGTGGATC ATGAAAAAGT
GAATGACTAC CTTGCGAGCT TATTGGAGTC TGAGGGTCTT GATGCACAAC TGAGCTATGA TGGACTTCGT ATACCAGTCA
GACTCTAGAT TTATACAACC TCAATAATTA TTTTTTTCCC GAAAGAGAAG TTATTAAACA ATACATTTAA ATGATTTTAC
AAGTTCACAC ATTCTGCATG CTACTGCAAC TATTCCACCT TCTTCCCATC CACTTGTCAT TCTTATTTCC TTGTCTCTAT
TAGCGACAAG CAACACTTAT ACCATAATGT AACAGGATTT TTTCCCCTTA CAATGAAATA TTTTATTGTG TAGTGAATTA
TTATTTGGTC A

>Vigan.09G204000.01
ACACAACACA CGTGTGTAAT TGTTCGTGTG ACTGACACAG ACAAACACTG CACAGACATT GAATCGATCA ATCAATGGTG
CTTGCGTCCA TTCGTCTTTT TCCTTCTCCA TTCCTCGCTT TCGCTCCTCG TCGCTCTCCA TATTCATGGC GCCCTCGTCC
CTCTTCCGTC GCCGCCTTCT CTTCTCTCCA CTCCTCGGCT TCTAAGGGAG ACGGCGGAGT GGAACTAGGT GGTGATCAAA
GACAAGCAGA AGTTATTTTT TTGGGGACTG GAACCAGTGA AGGGGTTCCT CGTGTTAGTT GCTTGACTAA CCCTTTAATT
AAATGTGAGG TGTGTTCAAA AGCTGCCCAA CCGGGAAATA AGAATAGGAG ACTTAACACA AGCATTCTCA TTCGTCACCC
CAATTCTTCA GGAACACAGA ATATTCTTAT AGATGCTGGA AAATTTTTCT ATCACAGTGC TCTCCGGTGG TTTCCTGCTT
ATGGGATAAG AACAATAGAT GCTGTCATTA TTACTCATTC ACATGCTGAC GCAATTGGAG GTCTTGATGA TCTCAGAGAT
TGGACAAACA ATGTTCAGCC TCATATTCCA ATATATGTAA CCAAACGAGA CTTTGAGGTG ATGACAAAGA CCCATTATTA
TTTAGTAGAT ACTAGTGTTA TCTTACCTGG TGCCAAAGTC TCAGAGTTGC AATTCAAAAT CATATCGGAA GAATCATTTT
TTGTACACGG ACTGAAGATT ACCCCATTAC CAGTTTGGCA CGGCCAGAAT TATAGGTCCC TTGGTTTTCG TTTTGGTAAT
ATCTGTTACA TTAGTGATGT TAGTGAAATT CCTGAAGAAA CTTACCCACT TCTAAAGGAC TGTGAAATTC TAATCCTGGA
TGGATTAAGA CCTGATCGTT CTACTTCCAC ACATTTTGGA CTTCCAAGGG CGTTGGAGGA AGTGCGAAAA ATTCAACCCA
AAAGAACACT TTTTACTGGT ATGATGCATC TGGTGGATCA TGAAAAAGTG AATGACTACC TTGCGAGCTT ATTGGAGTCT
GAGGGTCTTG ATGCACAACT GAGCTATGAT GGACTTCGTA TACCAGTCAG ACTCTAGATT TATACAACCT CAATAATTAT
TTTTTTCCCG AAAGAGAAGT TATTAAACAA TACATTTAAA TGATTTTACA AGTTCACACA TTCTGCATGC TACTGCAACT
ATTCCACCTT CTTCCCATCC ACTTGTCATT CTTATTTCCT TGTCTCTATT AGCGACAAGC AACACTTATA CCATAATGTA
ACAGGATTTT TTCCCCTTAC AATGAAATAT TTTATTGTGT AGTGAATTAT TATTTGGTCA 

>Vigan.09G204000.01
ATGGTGCTTG CGTCCATTCG TCTTTTTCCT TCTCCATTCC TCGCTTTCGC TCCTCGTCGC TCTCCATATT CATGGCGCCC
TCGTCCCTCT TCCGTCGCCG CCTTCTCTTC TCTCCACTCC TCGGCTTCTA AGGGAGACGG CGGAGTGGAA CTAGGTGGTG
ATCAAAGACA AGCAGAAGTT ATTTTTTTGG GGACTGGAAC CAGTGAAGGG GTTCCTCGTG TTAGTTGCTT GACTAACCCT
TTAATTAAAT GTGAGGTGTG TTCAAAAGCT GCCCAACCGG GAAATAAGAA TAGGAGACTT AACACAAGCA TTCTCATTCG
TCACCCCAAT TCTTCAGGAA CACAGAATAT TCTTATAGAT GCTGGAAAAT TTTTCTATCA CAGTGCTCTC CGGTGGTTTC
CTGCTTATGG GATAAGAACA ATAGATGCTG TCATTATTAC TCATTCACAT GCTGACGCAA TTGGAGGTCT TGATGATCTC
AGAGATTGGA CAAACAATGT TCAGCCTCAT ATTCCAATAT ATGTAACCAA ACGAGACTTT GAGGTGATGA CAAAGACCCA
TTATTATTTA GTAGATACTA GTGTTATCTT ACCTGGTGCC AAAGTCTCAG AGTTGCAATT CAAAATCATA TCGGAAGAAT
CATTTTTTGT ACACGGACTG AAGATTACCC CATTACCAGT TTGGCACGGC CAGAATTATA GGTCCCTTGG TTTTCGTTTT
GGTAATATCT GTTACATTAG TGATGTTAGT GAAATTCCTG AAGAAACTTA CCCACTTCTA AAGGACTGTG AAATTCTAAT
CCTGGATGGA TTAAGACCTG ATCGTTCTAC TTCCACACAT TTTGGACTTC CAAGGGCGTT GGAGGAAGTG CGAAAAATTC
AACCCAAAAG AACACTTTTT ACTGGTATGA TGCATCTGGT GGATCATGAA AAAGTGAATG ACTACCTTGC GAGCTTATTG
GAGTCTGAGG GTCTTGATGC ACAACTGAGC TATGATGGAC TTCGTATACC AGTCAGACTC TAG

>Vigan.09G204000.01
MVLASIRLFP SPFLAFAPRR SPYSWRPRPS SVAAFSSLHS SASKGDGGVE LGGDQRQAEV IFLGTGTSEG VPRVSCLTNP
LIKCEVCSKA AQPGNKNRRL NTSILIRHPN SSGTQNILID AGKFFYHSAL RWFPAYGIRT IDAVIITHSH ADAIGGLDDL
RDWTNNVQPH IPIYVTKRDF EVMTKTHYYL VDTSVILPGA KVSELQFKII SEESFFVHGL KITPLPVWHG QNYRSLGFRF
GNICYISDVS EIPEETYPLL KDCEILILDG LRPDRSTSTH FGLPRALEEV RKIQPKRTLF TGMMHLVDHE KVNDYLASLL
ESEGLDAQLS YDGLRIPVRL *