GBrowse Details

Vigan.09G193900.01

Basic Information:
Name: Vigan.09G193900.01
Multiple alignment
Variant Information
Position: Chr09:33987115..33990238 (+ strand)
Length: 3124
Functional Information:
Description: Similar to mitochondrial intermembrane space import and assembly protein 40-like isoform X4. [XP_004510474.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.46,3.46,10.41,4.25,11.64,13.21,12.37,5.42
Arabidopsis thaliana homolog: AT5G23395.1
Automatic updates:
Name: NM_001349684 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max hypothetical protein (LOC100305988), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr09:33987115..33987249 (+ strand)
Length: 135
Type: five_prime_UTR
Position: Chr09:33987250..33987349 (+ strand)
Length: 100
Type: CDS
Position: Chr09:33987454..33987485 (+ strand)
Length: 32
Type: CDS
Position: Chr09:33987573..33987698 (+ strand)
Length: 126
Type: CDS
Position: Chr09:33989824..33990003 (+ strand)
Length: 180
Type: CDS
Position: Chr09:33990004..33990238 (+ strand)
Length: 235
Type: three_prime_UTR

>Vigan.09G193900.01 class=Sequence position=Chr09:33987115..33990238 (+ strand)
TAGAGAAGCA ATCTCAGAAT TTCACTTTCC GTGTAGAGAG GAGATACCAA TTCAGAATTG GCTTCAAAGT TTGAATTTTT
AACGCACCAG AAAACCAGAG GTTCAGAATT GAGGACTCAG AAATTAGGAT TCACGATGGG TCAAATTGAA AGCGCAGAAG
CTGCGGCGGA GACTCAAACC ACCATCATCA CCACCGACAC CTCCAAACCA ACTTCCTTGG AATCCGCGCT CGCAGGTTGT
TTTTCCGTGT TTCATTCCTC GCGTACTTCA ACTGTTTGTG TAAATGTGCG GCTGAAACGA AATCTCAATT TGTGTCGTGT
TTTTATTTTA ACATTGCAGA AGCTGCAGAA TATGGAAGTC AACATACTGA GGTTTGCACT AACTTGCTTT GGTTATTTGC
TTTCAACTGT GAAATTGAGT GAATGAATGA AAACAATAGA AAATTCTGGA TTTTTCAGTC CATCGAGGCA ATGGCTCAGA
AAGCTCTCGA ATGCCCCTGC ATTGCTGATT TGCGAACTGG TTCCTGTGGC TCTCAGTTCT CAGAGGCATT TCTGTGTTTT
CTCAAGAGTA CCTCTGAAGA AAAGGTATAT CTTACTTCAT AATTCTCTTT CATTACTGTT AGTGATAGCT TCGTTTCCTG
AAGCAAGATG TAGCTACAAT TACAAGTATG AAGTGAACTG GTTTATAGCC GTTTGTAGGT CACAACTTCA GCGTATATCT
ACCTTGATCA GACTTTTAAC GTATCCTGTT TGATATTAGA TTAGTGAACT CAACGTTGTG TTCTTTCAAC TATTTGTAGT
TTTGGAGATT TCTCATTGAC TTGAGTGAAA GACAAAGCTA GCTCTATAAA ACGAGATAGG TTTGGATAGA GCTTTAACAA
TACTTCAGTA AACTTTTTGC AGAACAGTCC ATTAGACGAT GTAAGGAGGT CATCTGATTC TGTATAAATG CATTCAAAAT
GTTTTCATTA CCTTACTGTC AAGAGCAAAT CCAGACGTGT AATAGACAGC AGCATGAATG CATAAATTTT ATACTAGTTC
ATTTCAAACT TCAGCTATGT CCAATTACCC TTTGCAAATT GCAATGTGTT CCACTCTACA ATAAAGATTA CAAGTATTTT
TATTACTACT TCTGCCTTAC AGCAAGTACA CGAAGTCATT ATTGACACAA CGCTTTCCCG GTTAAATATA CTTAAAGCTC
TTCAGTCTAT ATGCAATCTT CCCTTGTGAT TAAGCCTGAG TGGTACACAA AGCTTTCCAT ACCAAGTATC CAAAGCCTTT
CCAGGTTAAG TATACAAAAT CTCTCCAGGC TATACAACAG AAGTTATTTG ATACAAGGTT CACACCCAAA AGAGTGGATA
TCAAATAAAA GTTTCTTGTT CTAGCGATAT AATTTCTCAA CAGTGAAGGA TACACAGAAT ATTCACTCTC TAAATTGTTT
AGAAGATGAA CTATGTCTAA GAACTTAGAA GCTTTTTTCT GATTTTGTCA CAAGCACGCA AAAATCACTT GTATTTTGGA
TACTTCACTT TTATTGCGTG GGAAAACTTC CTTTTATAGA CGTCTAGAAA TGAGCATTGC AGGTTGCATG CTTTAGAGGA
TCTTCTATTA TAGCTTTATC AAAAGATCAC GACTTTATGC TAACATCTTT TACTATTGTA GTACAAAGAG ATGTGTAAGC
CACATTCTTT ATCTATGTAA GGTTTCCGCT TTTTGTTGAC AATACCATGT TAATCATATG ACATCAATGA ATCTTATTTG
AAAGACATTC TTGGTCAACT TTGTTGTCAT TAGACTCTAC TACAATGTTT AATTCTACTT GACTTTCTCT TGAACACTTC
TTCATCTTCA TAAGAATCTT CTAGACTTGC ACACTTTGTC TTGCTGAACT TGCGTTCGAT GCTTCTACAA GTCTTTCTTT
GGTCTTGTGT ACATGCATTA GCAATACTTG CATTTTGTAC TATGCCGGTT ACGTCTTATC TATATAGGAC TTGCATCTAG
AGCTTTAAGC TCGTCTGTCT TATCAACATA TTGACATTTT GATCATACTT TAAGATACAT CCATTTAGCA TATTGCATGT
CGTCTAATAC CTGTTTCACA CTGAGCAGAT ACATCAGATG TACCGATTAA TTTAATTGTT ATGATTAAAA CATGGGTGTT
TTAGACATAA CTTTAAGATT AAGACCTACG TCTTATCGTA ACTAAATTTG TTTGTCATAT TATAGAGACA TGACTAATTA
TAGTATATAA ATGAATATAA ACCTAATTTT ATAATTAAGA TCCACTTTCT AAATATGAGA GTCTATCTTA GATCCATTAA
AAATGGTCAG TCACCAAGTT ATGTATATAC CAAACACAAT GGTACTAGAC GTGAGGTATC TTCGAATCTC ATGTCATGAC
TAAATTATAT AATATATAAA TAAATATAAA TCTCATTTTT TACATATTGG TTTTATGAGA TTGAGTTAAA CTTAAATTTA
TTCATTTACA TCCTTAAAAC CTAGCTATAA AGATTATACG TGCTCTTTCA ATATAATGTT TTGATTAAGA ATTTAGTGTA
ATGTGCAAGT CTGTCTTACT GAAAGGTCGC ATATACTCTG TAATAGCAAT TAACAACCAC TATGGGCAAA TTTAAAGTAT
TATTTTTTTG AATCTTGATT TCTGTATTAT TGTATGGGTT GCTATGTGAA ATTTGTTCCA TATATGTAGG GCTCAGACTG
CGTACACCCG TTCATTGCTC TGCAGAGCTG CATCAAGGCC AATCCAGATG CATTCTCTAA GGACATTTTA GGCGAAGAAG
AAAGCAATGA GTTGGGGCCA GTCCTAGAAT ATGAAATACT TCCTCCCAGA TGGGCTAAGG AATCTGAAAG ACCAAAATCC
AATCTTTAAG GGAAAAGTTG GACTCTCGTT CGGCAACTTC TTGGAGAAGG TTGTGTTAGA TTAATAATGA ATTTGTATTA
GTGTTGCCTG CTTAGAAAAG TGACATGATG TATCTCTTCC ACAAAATGCT TCATCTCGTG CAATGGCTTT ATACCACAAA
ATATAATTTA TTTTCTATAT AGTTTTGGGA ATACACTCAA ATGCTTGCAT CTTTCTTTCT ATCTACTGGA AACCTTTAAA
AGAG

>Vigan.09G193900.01
TAGAGAAGCA ATCTCAGAAT TTCACTTTCC GTGTAGAGAG GAGATACCAA TTCAGAATTG GCTTCAAAGT TTGAATTTTT
AACGCACCAG AAAACCAGAG GTTCAGAATT GAGGACTCAG AAATTAGGAT TCACGATGGG TCAAATTGAA AGCGCAGAAG
CTGCGGCGGA GACTCAAACC ACCATCATCA CCACCGACAC CTCCAAACCA ACTTCCTTGG AATCCGCGCT CGCAGAAGCT
GCAGAATATG GAAGTCAACA TACTGAGTCC ATCGAGGCAA TGGCTCAGAA AGCTCTCGAA TGCCCCTGCA TTGCTGATTT
GCGAACTGGT TCCTGTGGCT CTCAGTTCTC AGAGGCATTT CTGTGTTTTC TCAAGAGTAC CTCTGAAGAA AAGGGCTCAG
ACTGCGTACA CCCGTTCATT GCTCTGCAGA GCTGCATCAA GGCCAATCCA GATGCATTCT CTAAGGACAT TTTAGGCGAA
GAAGAAAGCA ATGAGTTGGG GCCAGTCCTA GAATATGAAA TACTTCCTCC CAGATGGGCT AAGGAATCTG AAAGACCAAA
ATCCAATCTT TAAGGGAAAA GTTGGACTCT CGTTCGGCAA CTTCTTGGAG AAGGTTGTGT TAGATTAATA ATGAATTTGT
ATTAGTGTTG CCTGCTTAGA AAAGTGACAT GATGTATCTC TTCCACAAAA TGCTTCATCT CGTGCAATGG CTTTATACCA
CAAAATATAA TTTATTTTCT ATATAGTTTT GGGAATACAC TCAAATGCTT GCATCTTTCT TTCTATCTAC TGGAAACCTT
TAAAAGAG

>Vigan.09G193900.01
ATGGGTCAAA TTGAAAGCGC AGAAGCTGCG GCGGAGACTC AAACCACCAT CATCACCACC GACACCTCCA AACCAACTTC
CTTGGAATCC GCGCTCGCAG AAGCTGCAGA ATATGGAAGT CAACATACTG AGTCCATCGA GGCAATGGCT CAGAAAGCTC
TCGAATGCCC CTGCATTGCT GATTTGCGAA CTGGTTCCTG TGGCTCTCAG TTCTCAGAGG CATTTCTGTG TTTTCTCAAG
AGTACCTCTG AAGAAAAGGG CTCAGACTGC GTACACCCGT TCATTGCTCT GCAGAGCTGC ATCAAGGCCA ATCCAGATGC
ATTCTCTAAG GACATTTTAG GCGAAGAAGA AAGCAATGAG TTGGGGCCAG TCCTAGAATA TGAAATACTT CCTCCCAGAT
GGGCTAAGGA ATCTGAAAGA CCAAAATCCA ATCTTTAA

>Vigan.09G193900.01
MGQIESAEAA AETQTTIITT DTSKPTSLES ALAEAAEYGS QHTESIEAMA QKALECPCIA DLRTGSCGSQ FSEAFLCFLK
STSEEKGSDC VHPFIALQSC IKANPDAFSK DILGEEESNE LGPVLEYEIL PPRWAKESER PKSNL*