GBrowse Details

Vigan.09G062100.01

Basic Information:
Name: Vigan.09G062100.01
Multiple alignment
Variant Information
Position: Chr09:8418533..8423476 (+ strand)
Length: 4944
Functional Information:
Description: Similar to Uncharacterized protein. [I1JLI6, Glycine max]
InterPro: Amino acid transporter, transmembrane (IPR013057)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.34,3.15,19.55,41.01,1.06,7.53,17.43,41.66
Arabidopsis thaliana homolog: AT1G77690.1, AT2G21050.1, AT2G38120.1, AT5G01240.1
Automatic updates:
Name: NM_001353914 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max auxin transporter-like protein 3 (LAX3), mRNA.
PubMed ID: 27014306 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr09:8418533..8418842 (+ strand)
Length: 310
Type: five_prime_UTR
Position: Chr09:8418843..8419022 (+ strand)
Length: 180
Type: CDS
Position: Chr09:8419102..8419287 (+ strand)
Length: 186
Type: CDS
Position: Chr09:8419399..8419511 (+ strand)
Length: 113
Type: CDS
Position: Chr09:8419621..8419804 (+ strand)
Length: 184
Type: CDS
Position: Chr09:8419921..8420018 (+ strand)
Length: 98
Type: CDS
Position: Chr09:8420669..8420876 (+ strand)
Length: 208
Type: CDS
Position: Chr09:8421733..8421990 (+ strand)
Length: 258
Type: CDS
Position: Chr09:8422964..8423194 (+ strand)
Length: 231
Type: CDS
Position: Chr09:8423195..8423476 (+ strand)
Length: 282
Type: three_prime_UTR

>Vigan.09G062100.01 class=Sequence position=Chr09:8418533..8423476 (+ strand)
CTCTTCTTAG TGAGTAAAAC GTATGTAAAC AGTTTGTGCC CACTTGTTTT TCTTTTTTTG TTTCCTTTTC TCTCTTGCCC
GCATCTCTTT TGTTTTGGAT TTGTGTGGGG GAGAAACCTG AAGTTGTTCG TTCTATTTTT GTTATTATTT TTTATTTGGA
ATTCTGCAAA GGAATTTTCA GTTATGTGGA TCTGGGCACT TTCTTGGCTT TCGTTTTCTG GGGCTGCGTT TTATATCATG
ATTTTTGTCT CATTTAGTGT CCTTTTATGT ATTTCAGATC TAGACACTGG TTTTGTGGAT AAGGGAGACA ATGTTGTCTC
AGAAGCAAGC AGAGGAAGCA ATAGTCACAA ACCTCAACGA GACAGAACAT GAAGTGGGAA GCACAAGGGA AGAAGAGAGG
GAGCAAGACC ACTCCATGTT CAGTCTCAAG AGCATCCTTT GGCATGGCGG TTCTGTCTGG GATGCATGGT TCAGCTGTGC
CTCAAATCAA GTAAATCACT CCGTCCATTA GACCCTTGAA AAAAGAACCT TTTGGTCCAT GTTTAACCCA CAAATTTTCC
TTTTTATAGG TGGCTCAAGT GCTCTTGACA CTCCCATACT CCTTCTCTCA ACTTGGCATG CTATCAGGCA TCTTGTTTCA
GGTGTTCTAT GGAATTATCG GAAGCTGGAC TGCTTATCTA ATCAGTGTCC TCTACGTTGA GTACCGCACC AGAAAGGAAA
AGGAAAACGT CAACTTCAAG AACCATGTCA TTCAGGTTCG TCTCTTGTGT TGCCTTCACG ATTTCTCTTT CCATCTCCAC
TGCTTCCTAA TCTGTATAAA GAGAAACAAC GGTGACTAAA TAGAATTGCA CTGTTCTGGA TTGCAGTGGT TCGAAGTCCT
TGATGGGTTA CTTGGTCCAT ATTGGAAAGC AGTGGGGCTA GCCTTCAACT GTACTTTCCT CCTCTTTGGA TCTGTGATAC
AGCTTATAGC ATGTGCAAGG TAACACCTTT GCTTCCATTT TTAAAGCAAC TAGAACTGAT ATAAAGTGGG TCTAAACTTT
TCCTCTATTT ACGACATTGT TTTCTTTTTT CTTTTCTGAT ACAAACAGTA ACATCTATTA CATAAATGAC AAATTGGATA
AACGAACTTG GACTTATATT TTTGGAGCTT GCTGTGCCAC CACTGTGTTC ATACCTTCCT TCCACAATTA CCGAATCTGG
TCATTTTTGG GTCTTGGAAT GACCACTTAC ACGGCTTGGT ACCTTGCTGT GGCAGCTATC CTTCATGGCC AGGTGATATA
ATTCACCAAA TCACTTTTCA TCACACACAC TTCCATTGAA ACCACCATAA CAATTGCTCA ATTTTTATCT TACATGGTAT
ACTCAACACT TGCAAATCAT GTTTATAGGT GGAAAATGTT AAACACTCGG GTCCCGCAAA GCTAGTGCTA TACTTCACTG
GAGCCACTAA CATACTCTAC ACCTTTGGCG GACATGCTGT GACTGTGTAA GTTTACCTTT TTTCATCACC ATCATCACGA
TCTACCTTCT GTCCTCTTTC CCTCGTTTAT CTCTGTTTTT TCGCACTGCT TCTCTTTGCA GCTTTTGCCG GTTATCTTGG
TTTTCGAGAT CTCTGGCCAA AAACAAAAGA TCATGCAAAA TCTGCTTTCT ATGGTCTTTT TTTCTTTGGC TTCGAAAGTG
TTACTACCTC TGCCCCTCCT TATCTCTAGG AAGATTCCGC AATTAAATGG CCATTATTTC CAAATTCTGA TTGAATGAAT
GTATGCAATT TCTCAATTAA TTAAAATTTT AATAATGAAA AATTACAATT TTGTTGGGTC TTGTTGGTCG GTTCCTACAT
CACAAAATTC TAGTCGTAGT AAGTTCTTCA CAAAGTATGT TTTTTAATTT TTAATTTTAA AATCACACCT TTTATAACTT
TCAATGTCGT CTCATGATTT GTATATTATG GAAGATTTGA TGATGTAATT TTAATTTAAC ACTTTAAAAA CCTATTAATA
TCATTATCCG AAGCCAGATT ATATTATTAA TGAAAGTCTC CATTTTTAGA AATTTGAGTG TGGAATTTCG TTGTGATTAT
ATATATTTAT GGTAGATCTT CTGTTGATAA AGTGATAATG GTGACAAATG TTGCAGAGAG ATTATGCATG CCATGTGGAA
GCCCCAAAAG TTCAAGTACA TCTACCTGCT GGCCACTTTG TACGTTTTCA CACTAACGAT TCCCTCCGCC GTCGCCGTCT
ATTGGGCTTT TGGTGATATG CTTCTTAACC ACTCCAACGC CTTCTCTCTC CTTCCCCAGT CTGGCTTCCG TGATGCCGCC
GTCATCCTCA TGCTCATTCA CCAGGTAACT TAGTTCATGA ACAATTTTAT TTTTATTTTA AAAAATAATA ATAAATAACA
AGTAAAACAA AACAACTAGG TTCGGAACAA ACAAGTGACC CTAACATCAA CTTCTGGATT GGATTTAAGC ATGTTAAAAT
TAATGTATTT TGACGATAAA AAAACATTAA AATAATTATT TATTTAAGAA ATTGATAGGA TAAATTTATT AAATAAGTAA
AAAATTTAAA TAAATAGATT ACACAAACAC ATACACAATA TATATTTATT TATTTCATTA AATAAATACT TCCTTCAAGT
AAACACAAGC AAACTTATTC ACTATTACAA TCATATTCGT ATCCTAATAA CCTAATAGCT TATTATTATA GTAGACAACA
AATTCATATC ATTCCCATTA TTAATTAGTG TATATATTTT AGAAATATAT CGAAACATGA TTAATAATAA GTGATAATAT
TTTTAGCACT GAATTTATTT TAAAACTGTG ATTTTATAAG TAAAACATAA GAAAGGATTT TGTACATCAA AGTCAAATCT
TTCATTTGTT GTACTTTGGT CGTAGGAGCC CGTGTGGGTA ATTTTATAAC TATTTTTACG CGCCAATTTT CGTAGTTTAT
TACTTACCTC TTTTTTATAG TCTTATGTGT TTTTCTATCC TATATCTCTC TCTTAATTGT AAAAAAGTAA TATAAAAATA
ACACTAAAAT ATGTTTTTCT GTGTCACGAA TAAGACCTTC TTGTTCATGT CATTTTTAAT AAATTTAATA TATAAAGATA
ATTTTAGTAG CAACATAATT TATACGCAGA CATATGAATG AAAAAAAAGT TATTAAATTT TGTTTTACAT GTGAATGCAG
TTCATCACAT TTGGGTTTGC GTGCACTCCA TTGTATTTTG TGTGGGAGAA GGTGATTGGG ATGCATGACA CAAAGAGCAT
CTGTTTGAGA GCACTTGCAC GATTGCCGGT GGTGATACCG ATATGGTTTT TGGCTATAAT CTTTCCTTTC TTTGGTCCCA
TAAATTCAGC TGTTGGATCT CTGCTTGTTA GTTTCACTGT CTACATCATC CCTTCCTTAG CCCATATGCT CACTTACAGA
AAAGCCACTG CCAGACAGGT AAATCTTCAA ACATCTTAAC TATCTCTTTG CCTGCCCCCT CCCCCACCAC CATCTCTTCT
TCCATAACCA TCTATTTAAT GTCAAATTTT CATTAACATT CCAAATATTC ATTCTTTTTC TTCCTATCAT TAACAGCATT
TATTTTTTTA TCAGTATACG AAAAATTAAA ATTCGTTCAT ATTTAAAATT TTAATATATT TTTTATTAAA TTTTTTGAAA
ATAAATGATA TAAATGTTAA TATTTACACA TTGTAAATCA AAATTTAGTT AATAAAACCA TATTTAATTA TAAAAATTAA
ATCTACAGCC TTATTATTGT TATTGTTATA TATAAAAAGT AAAAGATGAA AACATCTAGA AAGAGAGTGG GGTGGGAGGA
GTGGTACGTA GCAACAAATG TACAAATGCA TTTAAGGCTT GGATTTGGAA ATTATACGAG AAGTATGGAA GCTGGTGGTG
GGTCATTTTC GTACAGTTGT TTACTATAGT TTGATTATGT ACTGTCCTAT ACAACTTGCT GTGGAATTCA CTCATCTCTA
TCCCTGATAA CTAAAATTAT AGGAAGACGA TTATTTATAA ATTTAATTTT TGCAAAGTGA AAGTATGCGT AAGTACTATA
AATTATTGAT GCCAAAATTA GGCATTGATA TTTAAAAACA ATTTTTTTAA TTTTTAAATG AAGAATAAAT ATTTTTACTT
AAGCTTCATT TAGAGGGGAG TTCATAAGAG GATTTAGAAT CATGTTTATG AAAATGAGGA AAGTGACAAA AATCCCTATG
GGTTTGGACA TGGGAATTGG GGGGCCTCCC TAAGATATCT TAGTTTATCT TCGTACTATA TTTGAAAATC TCGTTAAATC
TCCTCGTTTG CATTATTGTT GGCCCCTTTT TGGGATTTTT GTGAGTGTTA CAACAATAGT AGTGTGGGGG CACCATAACA
AATATCTAAG TTTTTCACCC TAATTTTGCA GAATGCTGCA GAGAAGCCTC CTTTCTTCAT GCCAAGTTGG ACTGCAATGT
ATGTATTGAA TGCATTCATT GTTGTATGGG TTTTTGTTGT TGGATTTGGG CTTGGAGGAT GGGCCAGCAT GACAAACTTT
ATAAGGCAAA TTGATACATT TGGGCTTTTT GCTAAGTGCT ACCAGTGCCC TCAAGCAACA CCACATGTTG TGGCAGCACC
ACCCCCTCAT GCTCATCATT AAAGCAAAAG CTTATTCATT CACCACAACA TGGTAGAGTT CAGCAACAAT CACATTTTCC
TCAATACTTT GTATTATACA GGGGGGAAAA TGTTGAACAT ATACTTCCCC CTTTCTATGA TGTGTGTGCT GGCTGGGTTT
TACATTGTTT TTGTCCTTTT TCTTTGTTAT ATAGTATTTT GTCCCTCCCT TCTTGTAAGA TTAGTTGATT AAAACTAGTG
TGTCAAATGT TATGATTCCT TTCCTATGAA ATGCACAGGC TAATTAAATT AAAATTAAAC ACTA

>Vigan.09G062100.01
CTCTTCTTAG TGAGTAAAAC GTATGTAAAC AGTTTGTGCC CACTTGTTTT TCTTTTTTTG TTTCCTTTTC TCTCTTGCCC
GCATCTCTTT TGTTTTGGAT TTGTGTGGGG GAGAAACCTG AAGTTGTTCG TTCTATTTTT GTTATTATTT TTTATTTGGA
ATTCTGCAAA GGAATTTTCA GTTATGTGGA TCTGGGCACT TTCTTGGCTT TCGTTTTCTG GGGCTGCGTT TTATATCATG
ATTTTTGTCT CATTTAGTGT CCTTTTATGT ATTTCAGATC TAGACACTGG TTTTGTGGAT AAGGGAGACA ATGTTGTCTC
AGAAGCAAGC AGAGGAAGCA ATAGTCACAA ACCTCAACGA GACAGAACAT GAAGTGGGAA GCACAAGGGA AGAAGAGAGG
GAGCAAGACC ACTCCATGTT CAGTCTCAAG AGCATCCTTT GGCATGGCGG TTCTGTCTGG GATGCATGGT TCAGCTGTGC
CTCAAATCAA GTGGCTCAAG TGCTCTTGAC ACTCCCATAC TCCTTCTCTC AACTTGGCAT GCTATCAGGC ATCTTGTTTC
AGGTGTTCTA TGGAATTATC GGAAGCTGGA CTGCTTATCT AATCAGTGTC CTCTACGTTG AGTACCGCAC CAGAAAGGAA
AAGGAAAACG TCAACTTCAA GAACCATGTC ATTCAGTGGT TCGAAGTCCT TGATGGGTTA CTTGGTCCAT ATTGGAAAGC
AGTGGGGCTA GCCTTCAACT GTACTTTCCT CCTCTTTGGA TCTGTGATAC AGCTTATAGC ATGTGCAAGT AACATCTATT
ACATAAATGA CAAATTGGAT AAACGAACTT GGACTTATAT TTTTGGAGCT TGCTGTGCCA CCACTGTGTT CATACCTTCC
TTCCACAATT ACCGAATCTG GTCATTTTTG GGTCTTGGAA TGACCACTTA CACGGCTTGG TACCTTGCTG TGGCAGCTAT
CCTTCATGGC CAGGTGGAAA ATGTTAAACA CTCGGGTCCC GCAAAGCTAG TGCTATACTT CACTGGAGCC ACTAACATAC
TCTACACCTT TGGCGGACAT GCTGTGACTG TAGAGATTAT GCATGCCATG TGGAAGCCCC AAAAGTTCAA GTACATCTAC
CTGCTGGCCA CTTTGTACGT TTTCACACTA ACGATTCCCT CCGCCGTCGC CGTCTATTGG GCTTTTGGTG ATATGCTTCT
TAACCACTCC AACGCCTTCT CTCTCCTTCC CCAGTCTGGC TTCCGTGATG CCGCCGTCAT CCTCATGCTC ATTCACCAGT
TCATCACATT TGGGTTTGCG TGCACTCCAT TGTATTTTGT GTGGGAGAAG GTGATTGGGA TGCATGACAC AAAGAGCATC
TGTTTGAGAG CACTTGCACG ATTGCCGGTG GTGATACCGA TATGGTTTTT GGCTATAATC TTTCCTTTCT TTGGTCCCAT
AAATTCAGCT GTTGGATCTC TGCTTGTTAG TTTCACTGTC TACATCATCC CTTCCTTAGC CCATATGCTC ACTTACAGAA
AAGCCACTGC CAGACAGAAT GCTGCAGAGA AGCCTCCTTT CTTCATGCCA AGTTGGACTG CAATGTATGT ATTGAATGCA
TTCATTGTTG TATGGGTTTT TGTTGTTGGA TTTGGGCTTG GAGGATGGGC CAGCATGACA AACTTTATAA GGCAAATTGA
TACATTTGGG CTTTTTGCTA AGTGCTACCA GTGCCCTCAA GCAACACCAC ATGTTGTGGC AGCACCACCC CCTCATGCTC
ATCATTAAAG CAAAAGCTTA TTCATTCACC ACAACATGGT AGAGTTCAGC AACAATCACA TTTTCCTCAA TACTTTGTAT
TATACAGGGG GGAAAATGTT GAACATATAC TTCCCCCTTT CTATGATGTG TGTGCTGGCT GGGTTTTACA TTGTTTTTGT
CCTTTTTCTT TGTTATATAG TATTTTGTCC CTCCCTTCTT GTAAGATTAG TTGATTAAAA CTAGTGTGTC AAATGTTATG
ATTCCTTTCC TATGAAATGC ACAGGCTAAT TAAATTAAAA TTAAACACTA 

>Vigan.09G062100.01
ATGTTGTCTC AGAAGCAAGC AGAGGAAGCA ATAGTCACAA ACCTCAACGA GACAGAACAT GAAGTGGGAA GCACAAGGGA
AGAAGAGAGG GAGCAAGACC ACTCCATGTT CAGTCTCAAG AGCATCCTTT GGCATGGCGG TTCTGTCTGG GATGCATGGT
TCAGCTGTGC CTCAAATCAA GTGGCTCAAG TGCTCTTGAC ACTCCCATAC TCCTTCTCTC AACTTGGCAT GCTATCAGGC
ATCTTGTTTC AGGTGTTCTA TGGAATTATC GGAAGCTGGA CTGCTTATCT AATCAGTGTC CTCTACGTTG AGTACCGCAC
CAGAAAGGAA AAGGAAAACG TCAACTTCAA GAACCATGTC ATTCAGTGGT TCGAAGTCCT TGATGGGTTA CTTGGTCCAT
ATTGGAAAGC AGTGGGGCTA GCCTTCAACT GTACTTTCCT CCTCTTTGGA TCTGTGATAC AGCTTATAGC ATGTGCAAGT
AACATCTATT ACATAAATGA CAAATTGGAT AAACGAACTT GGACTTATAT TTTTGGAGCT TGCTGTGCCA CCACTGTGTT
CATACCTTCC TTCCACAATT ACCGAATCTG GTCATTTTTG GGTCTTGGAA TGACCACTTA CACGGCTTGG TACCTTGCTG
TGGCAGCTAT CCTTCATGGC CAGGTGGAAA ATGTTAAACA CTCGGGTCCC GCAAAGCTAG TGCTATACTT CACTGGAGCC
ACTAACATAC TCTACACCTT TGGCGGACAT GCTGTGACTG TAGAGATTAT GCATGCCATG TGGAAGCCCC AAAAGTTCAA
GTACATCTAC CTGCTGGCCA CTTTGTACGT TTTCACACTA ACGATTCCCT CCGCCGTCGC CGTCTATTGG GCTTTTGGTG
ATATGCTTCT TAACCACTCC AACGCCTTCT CTCTCCTTCC CCAGTCTGGC TTCCGTGATG CCGCCGTCAT CCTCATGCTC
ATTCACCAGT TCATCACATT TGGGTTTGCG TGCACTCCAT TGTATTTTGT GTGGGAGAAG GTGATTGGGA TGCATGACAC
AAAGAGCATC TGTTTGAGAG CACTTGCACG ATTGCCGGTG GTGATACCGA TATGGTTTTT GGCTATAATC TTTCCTTTCT
TTGGTCCCAT AAATTCAGCT GTTGGATCTC TGCTTGTTAG TTTCACTGTC TACATCATCC CTTCCTTAGC CCATATGCTC
ACTTACAGAA AAGCCACTGC CAGACAGAAT GCTGCAGAGA AGCCTCCTTT CTTCATGCCA AGTTGGACTG CAATGTATGT
ATTGAATGCA TTCATTGTTG TATGGGTTTT TGTTGTTGGA TTTGGGCTTG GAGGATGGGC CAGCATGACA AACTTTATAA
GGCAAATTGA TACATTTGGG CTTTTTGCTA AGTGCTACCA GTGCCCTCAA GCAACACCAC ATGTTGTGGC AGCACCACCC
CCTCATGCTC ATCATTAA

>Vigan.09G062100.01
MLSQKQAEEA IVTNLNETEH EVGSTREEER EQDHSMFSLK SILWHGGSVW DAWFSCASNQ VAQVLLTLPY SFSQLGMLSG
ILFQVFYGII GSWTAYLISV LYVEYRTRKE KENVNFKNHV IQWFEVLDGL LGPYWKAVGL AFNCTFLLFG SVIQLIACAS
NIYYINDKLD KRTWTYIFGA CCATTVFIPS FHNYRIWSFL GLGMTTYTAW YLAVAAILHG QVENVKHSGP AKLVLYFTGA
TNILYTFGGH AVTVEIMHAM WKPQKFKYIY LLATLYVFTL TIPSAVAVYW AFGDMLLNHS NAFSLLPQSG FRDAAVILML
IHQFITFGFA CTPLYFVWEK VIGMHDTKSI CLRALARLPV VIPIWFLAII FPFFGPINSA VGSLLVSFTV YIIPSLAHML
TYRKATARQN AAEKPPFFMP SWTAMYVLNA FIVVWVFVVG FGLGGWASMT NFIRQIDTFG LFAKCYQCPQ ATPHVVAAPP
PHAHH*