GBrowse Details

Vigan.08G331000.01

Basic Information:
Name: Vigan.08G331000.01
Multiple alignment
Variant Information
Position: Chr08:42668654..42671680 (- strand)
Length: 3027
Functional Information:
Description: Similar to Uncharacterized protein. [I1MHQ4, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
InterPro: Aldo/keto reductase (IPR001395)
Aldo/keto reductase, conserved site (IPR018170)
Aldo/keto reductase subgroup (IPR020471)
NADP-dependent oxidoreductase domain (IPR023210)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:100.42,65.69,27.15,37.68,40.60,69.95,58.01,39.93
Arabidopsis thaliana homolog: AT1G59960.1
Automatic updates:
Name: MH450282 NCBI(nuccore)
Organism: Medicago truncatula
Description: Medicago truncatula chalcone reductase (CHR5) mRNA, partial cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:42668654..42668819 (- strand)
Length: 166
Type: three_prime_UTR
Position: Chr08:42668820..42669020 (- strand)
Length: 201
Type: CDS
Position: Chr08:42669256..42669435 (- strand)
Length: 180
Type: CDS
Position: Chr08:42669522..42669765 (- strand)
Length: 244
Type: CDS
Position: Chr08:42671236..42671564 (- strand)
Length: 329
Type: CDS
Position: Chr08:42671565..42671680 (- strand)
Length: 116
Type: five_prime_UTR

>Vigan.08G331000.01 class=Sequence position=Chr08:42668654..42671680 (- strand)
AATTATTTTT TATACAGTAC CTGTTATATA AAGAGATGTA AAGTGTCCAT GTTTGCTCAC CAAGCATATG ATAAATTTCC
AAGTAAAGCA AATATCATAG GGTTTGTGAA ACCATCATGT CTCTAACCAA AATTCCCCAA GTTGTGTTAA AATCCTCTTC
CAACCGGTGC AGCATGCAAG TGATAGCACT TGGAACTGCA GCTGATACAA ACAAAAGCAG TGCAGAAATC ACAAAAGTAG
CAGTAATAGA AGCTATCAAA CTGGGCTATA CACACTTTGA TACTGCAGCA TTCTATGGAT CTGAAGAGGC CTTGGGAGAA
GCCATAGCTG AAGCTCTTCA ACTTGGTCTA ATCAATTCTA GAGAGGAGCT CTTCATCACC TCTAAGCTCT GGCTCACTGA
CAATTTTCCT CATCTTGTTC TTCCTGCTCT GCAGAAATCT CTACAGTAAA CAAAACTTCT TCCTTTTCAA CATCAAAATC
GCTGTAATAA CATTTTCATT TGTTGTTATG ACTGTTTTAA TCAGTAATTT TCTTTTGGGG AGGTTATTTC AGTGCACCAA
ATTGCTCTAT AGTTTATTTA CCATTCAAAA CAAAAAAATG TGAGGGATGC AATCAATTCT TCAATTTCTA ACTCTATCTA
TGTTTTGTTT CGTTTTGATC AGTTACATGT GAACATAAAT TAATTATTCT ACCTTAAATT CTCTGTTATA TTGTCGGTGA
TTGTACTCAA TTTTCAGTTG GAAATGTTTT CCTTAAGAAA CATAGATATT AAGAGTTCGA TGATCAAATA TGTTCTACAG
AATATGATGC ATATGCAGTG ATGCACCCAA CTGTTAAGTA GTAATTTAGC TGGATGACCC AGTGGTGAAT GATTAGTTTG
ATAGGTTGGT TCTCTAGCTT CCATGATCCT CTTCTCTGGA TTCCATGAAT ATATTGGTTG TCCAGGTTCC ATGATCAACT
TCATGAGTTC TGTTCAGGGT TACATGTATT TGCTTGAAGT TCTGATAAAC ACTCCTTTTT CTATTATTTT AAGCAACTTA
ACTAATTTTT TATTCTAACC CATCAACTGT AAATAAATAA GCTTTACATC CCACATCAGT CTTTAGTATT TGTAGTACAA
TAAAACACAA GATACAACTA AGAAACTTAC AGGGCCTGTA AAAGTTAAAA AACTGCAGTT GGGTCTAACA CTGGGGCTCT
TATAACAATA ACATCAACAA AAGTTTAAGG ATAGCTACAT ACACAAAGAT TTAGCACAAT AAACCATATA GTATAATGTC
CTGGCTCTTA TATGGTAAAT ACAGGATTAT ATTCAAAATT GTATATTTCT CACACATAAT TATCTATAGA GTTACTAATT
AAACTGCAGA TGTCATTGGA GATATCCTAA AAAAAATAGC TATATTAACA AACTTTTTCT GTTTATTTGT AGATGAAAGA
AGCCTAAGGA TAGCTACATG TACAAACTTT AATGTTTTAT GCAGATGAAA GAGGCCACAA GCTCAAGTCA AAAGTCTGTG
CAGTTTTAAA ATAACTGCAG GGGACCCTCA CCCTTAACTT CTTCTGCTTC TGTTTTTTTC TGTTTTATGT AAGAAGTAGT
AAAACCTAAC TAAATGTGTT GAAGGAAAAT TTAGAGTCTG GATCTTAATT GCGAGAGGTG AACTTAAAAA TGGGTCAATA
AGAGGGCAAG CCCTGGTGTA AAAGTAAAGT TGTGCCTTGG CGACTGGTTG TGAGATTTTC ATTAGAGGTA TAAGTATATT
ATCTTGGAAT TTGAGTTGAA ATCTAACTCA ATATCAAAAA CTAGCTCAAA AGGTGTGGAG TATCCTCCAT GCACTATCAT
GAAATTTTCA TCATGCATCA TGTATATTGC ATAAGGAATA AGAGAGTACA GTGCTGAAAA GATGACACTA TGCAGGAGGC
TGAAATTAGA ATATTTGGAC CTTTACTTGA TCCACTGGCC TATCAGTGTG AAACCTGGAG ATTGGGAAAC TCCATATAGT
GAAGAGCTAA TAACAACATT TGACTTAAAG GGTGTGTGGA TAGCAATGGA AGAATGCCAG AAACTAGGCC TTGCAAAATC
CATAGGAGTC AGCAACTTCA CATGCAAGAA ACTTGAAGAT CTACTCTCAT TTGCTACCAT TCCCCCTTCT GTCAATCAAG
TAGTCCAATA TCTTGGTCAT TTTCTTTTTC ATGTTCATTT AGTTTGATAA GTGTTAACCT ATTTCTTTAC ACTGTTACCA
AATAGGTGGA GATGAATCCT GCTTGGCATC AGAAGAAGCT AAGAGAATTC TGTGAAGCAA AGGGTATAAT CATAACTGCA
TTTTCTCCTC TGGGAGCCAA AGGGGCCAGT TGGGGCACCA ATGAAGTCAT GGACAGTGAA ATACTCAAGG AAATTGCACA
AGCACATGTC CGAACTGTTG CTCAGGTTAC ACTTTAAGAT TACTTCATAT TCAATCACTT GAATTCATCT TTTCTTACAG
CACACAATAA CTTAAATAAT TAAGAATACA TGATGTATAT AATTACATCA AGAGACCCTT TTGAAAATAA GGCAACTACA
TGAACCCAAT GATCGTTGCT GCAATACTGT TTTAGTGTAG ATTTTGATTC TTGAACAGAT GATGAGCAAA GTTAATTAAT
GTTATGAGTT GTTGTCTCAG GTAAGTCTTA GATGGTTGTA TGAACAAGGT GTGACTATTG CGGCAAAGAG CTACAACAAA
GAGAGAATGA AGCAAAACTT GGAAATATTT GATTGGTCTC TTACAAGAGA TGACCATGAA AAGATTAATC AAATCAAGCA
GATTCGTACT AACAACGGAC CAGTGGTGTT CTTTGATAAC CTTTGGGACG GGGAAACTTA GGTTTCATGT CTGAAAAATT
ATTATCATCA CTTTCTTGAA GTCTTGAGTA CACTCTATGA TGTAATTTCT ATTTTATAGA TATTATGTTG TTTGTCCTAC
TTCTCACTTG CTGTGGAATA CTATACATTG ATCAACAATA GCTTTTAAAA TTATATTATT AGATGGA

>Vigan.08G331000.01
AATTATTTTT TATACAGTAC CTGTTATATA AAGAGATGTA AAGTGTCCAT GTTTGCTCAC CAAGCATATG ATAAATTTCC
AAGTAAAGCA AATATCATAG GGTTTGTGAA ACCATCATGT CTCTAACCAA AATTCCCCAA GTTGTGTTAA AATCCTCTTC
CAACCGGTGC AGCATGCAAG TGATAGCACT TGGAACTGCA GCTGATACAA ACAAAAGCAG TGCAGAAATC ACAAAAGTAG
CAGTAATAGA AGCTATCAAA CTGGGCTATA CACACTTTGA TACTGCAGCA TTCTATGGAT CTGAAGAGGC CTTGGGAGAA
GCCATAGCTG AAGCTCTTCA ACTTGGTCTA ATCAATTCTA GAGAGGAGCT CTTCATCACC TCTAAGCTCT GGCTCACTGA
CAATTTTCCT CATCTTGTTC TTCCTGCTCT GCAGAAATCT CTACAGAGGC TGAAATTAGA ATATTTGGAC CTTTACTTGA
TCCACTGGCC TATCAGTGTG AAACCTGGAG ATTGGGAAAC TCCATATAGT GAAGAGCTAA TAACAACATT TGACTTAAAG
GGTGTGTGGA TAGCAATGGA AGAATGCCAG AAACTAGGCC TTGCAAAATC CATAGGAGTC AGCAACTTCA CATGCAAGAA
ACTTGAAGAT CTACTCTCAT TTGCTACCAT TCCCCCTTCT GTCAATCAAG TGGAGATGAA TCCTGCTTGG CATCAGAAGA
AGCTAAGAGA ATTCTGTGAA GCAAAGGGTA TAATCATAAC TGCATTTTCT CCTCTGGGAG CCAAAGGGGC CAGTTGGGGC
ACCAATGAAG TCATGGACAG TGAAATACTC AAGGAAATTG CACAAGCACA TGTCCGAACT GTTGCTCAGG TAAGTCTTAG
ATGGTTGTAT GAACAAGGTG TGACTATTGC GGCAAAGAGC TACAACAAAG AGAGAATGAA GCAAAACTTG GAAATATTTG
ATTGGTCTCT TACAAGAGAT GACCATGAAA AGATTAATCA AATCAAGCAG ATTCGTACTA ACAACGGACC AGTGGTGTTC
TTTGATAACC TTTGGGACGG GGAAACTTAG GTTTCATGTC TGAAAAATTA TTATCATCAC TTTCTTGAAG TCTTGAGTAC
ACTCTATGAT GTAATTTCTA TTTTATAGAT ATTATGTTGT TTGTCCTACT TCTCACTTGC TGTGGAATAC TATACATTGA
TCAACAATAG CTTTTAAAAT TATATTATTA GATGGA

>Vigan.08G331000.01
ATGTCTCTAA CCAAAATTCC CCAAGTTGTG TTAAAATCCT CTTCCAACCG GTGCAGCATG CAAGTGATAG CACTTGGAAC
TGCAGCTGAT ACAAACAAAA GCAGTGCAGA AATCACAAAA GTAGCAGTAA TAGAAGCTAT CAAACTGGGC TATACACACT
TTGATACTGC AGCATTCTAT GGATCTGAAG AGGCCTTGGG AGAAGCCATA GCTGAAGCTC TTCAACTTGG TCTAATCAAT
TCTAGAGAGG AGCTCTTCAT CACCTCTAAG CTCTGGCTCA CTGACAATTT TCCTCATCTT GTTCTTCCTG CTCTGCAGAA
ATCTCTACAG AGGCTGAAAT TAGAATATTT GGACCTTTAC TTGATCCACT GGCCTATCAG TGTGAAACCT GGAGATTGGG
AAACTCCATA TAGTGAAGAG CTAATAACAA CATTTGACTT AAAGGGTGTG TGGATAGCAA TGGAAGAATG CCAGAAACTA
GGCCTTGCAA AATCCATAGG AGTCAGCAAC TTCACATGCA AGAAACTTGA AGATCTACTC TCATTTGCTA CCATTCCCCC
TTCTGTCAAT CAAGTGGAGA TGAATCCTGC TTGGCATCAG AAGAAGCTAA GAGAATTCTG TGAAGCAAAG GGTATAATCA
TAACTGCATT TTCTCCTCTG GGAGCCAAAG GGGCCAGTTG GGGCACCAAT GAAGTCATGG ACAGTGAAAT ACTCAAGGAA
ATTGCACAAG CACATGTCCG AACTGTTGCT CAGGTAAGTC TTAGATGGTT GTATGAACAA GGTGTGACTA TTGCGGCAAA
GAGCTACAAC AAAGAGAGAA TGAAGCAAAA CTTGGAAATA TTTGATTGGT CTCTTACAAG AGATGACCAT GAAAAGATTA
ATCAAATCAA GCAGATTCGT ACTAACAACG GACCAGTGGT GTTCTTTGAT AACCTTTGGG ACGGGGAAAC TTAG

>Vigan.08G331000.01
MSLTKIPQVV LKSSSNRCSM QVIALGTAAD TNKSSAEITK VAVIEAIKLG YTHFDTAAFY GSEEALGEAI AEALQLGLIN
SREELFITSK LWLTDNFPHL VLPALQKSLQ RLKLEYLDLY LIHWPISVKP GDWETPYSEE LITTFDLKGV WIAMEECQKL
GLAKSIGVSN FTCKKLEDLL SFATIPPSVN QVEMNPAWHQ KKLREFCEAK GIIITAFSPL GAKGASWGTN EVMDSEILKE
IAQAHVRTVA QVSLRWLYEQ GVTIAAKSYN KERMKQNLEI FDWSLTRDDH EKINQIKQIR TNNGPVVFFD NLWDGET*