GBrowse Details

Vigan.08G277600.01

Basic Information:
Name: Vigan.08G277600.01
Multiple alignment
Variant Information
Position: Chr08:32392710..32397379 (+ strand)
Length: 4670
Functional Information:
Description: Similar to V-type proton ATPase subunit G1-like isoform X2. [XP_004497500.1, Cicer arietinum]
GO: Biological Process: proton transport (GO:0015992)
Cellular Component: vacuolar proton-transporting V-type ATPase complex (GO:0016471)
Molecular Function: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances (GO:0016820)
InterPro: Vacuolar (H+)-ATPase G subunit (IPR005124)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.97,16.92,46.83,48.12,47.82,58.10,54.65,55.09
Arabidopsis thaliana homolog: AT3G01390.1
Automatic updates:
Name: NM_001249319 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499803 (LOC100499803), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249669 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306550 (LOC100306550), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:32392710..32393640 (+ strand)
Length: 931
Type: five_prime_UTR
Position: Chr08:32393641..32393803 (+ strand)
Length: 163
Type: CDS
Position: Chr08:32396634..32396734 (+ strand)
Length: 101
Type: CDS
Position: Chr08:32396822..32396965 (+ strand)
Length: 144
Type: CDS
Position: Chr08:32396966..32397379 (+ strand)
Length: 414
Type: three_prime_UTR

>Vigan.08G277600.01 class=Sequence position=Chr08:32392710..32397379 (+ strand)
AAACACCTTT CAGTCACAGG TACGCTCCTC TCTTCTTCCC TTTCAGATCT ACGCGATTCT ATTGCTTCCC CTCTCCAATT
CCACGCCGTT TCTTGTGCCT CTTTTCTCTT TCTTCTCTCT TCGTTATGCA TAAATATAAA TTAAATACAA ACGCTGAACT
GCACCTTAAC TAGATTTGGA TCTTTGCTTC TTAAATTATT GTATCAACGG AATTTCTGGT TAGCTTTTCT AGGTTTTTGA
TCTAAAACGA ACTAATAATA ATAATAACGA TTTGGAGAAG TTTTTCAGGG GAAGTGACTA ATCTTACTGA CTAAATAAGA
AAATTAATGC TTAATGAATT GATATTCCAA CACATCTATG CCTGTATGTG TTTTCACGTT CGTGGTACTT AGTTACACTT
GAAAGTGAAA TTTTCACTTC AGAGAAGTTA GATCCAAATT ATACCGTGTA AAATTTGTGA TTCTGTAATT GGATGATCCT
GTTTGCCGTT AATTTCATTT TTAAGTTCAC TGCCCCGTAT TTGGTTGCAT TTTTTTTGCA AGATCGTGAA TCGCGCCCGA
ATCTTTACCT CAACTACAGT TTAAAATTGA ATCATGTGAA ACTGCAATTT AAAATACTTT ACACATTAAA AACCTAATTT
TAATGGTTGC AGACGTAGTT TGAAGGTGTT TTTGTCTTTG CAAATCAAGC TAATTACGGT CTATGTATTG CTGCATGCTT
CCTTCTGTAT GATGTTGCTA TAATTAATTC GTCTAATGAT TTTTCTCGCC CTTTGTTTGG AAGGAGAAGA GTATTTGTTT
GGTTTTGTAA CATCTTTAGT TCAAAATTTC AAGTTTGATG ATAGAATCAG TTGTGTCTTG TTACTGTTGC ACTCCTTTCA
CTTTTCCGAA TTCCTAGGTA GAATGAAGGC GGTTCTTTTG CCTAATTATT GATGTGTTGT CGGAGGAGTT GCTTCGTGTT
AACCAATTCA CCATTTGTAA ATAGTTTCTG TCTGTGTCAT GACAGAATGG CATCCAACAG GGGTCAAGGT GGAATTCAAC
AGTTGTTGGC TGCAGAACAA GAGGCCCAAC GGATTGTGAA TGCTGCAAAA GCTGGTATTT TCTATCTTCG TTATCTTTCA
TGTCTTCCCA TCTTTTTCCG TGATTTCGTC TAATATTTGG TCTGGTTACG TGTTTTCCTT AAAAAAAGTA TGTCTGATTC
AATTATGTGT CCAGAGAGAC CTGTTTTACT CTCTATTCAT TTTATACAGG TCTTTTCTCT TTTACCTGGA AGGATGGATT
CTTGGTTTAT TGATGGGATG AATTCTTGCT TCTTCATAAA TGTTATAAAA GAAAGAGTTT TTACTATATA ATGACTTTTA
CATGGTTAAC TAATTAGAAA TCACTTTAGA TTTTACTTTC CAAATAGTTC ATGCTTGGTC AGAATAAAGA TTTTTATACT
AATTAGAAAA ATCACGCCAA ATTTTACTTT TAAATAATCG TAAGTGTAAC TTTGAAGTAG TTATAGTTGT GAAAATGGAA
TTGTATTGAA TGAAAATGGT TCTCTTCTTG TTACATCCTT CTCCTTAATC CTATATTTAT AGGGTTAAGT GAATGGAATA
CACACTCACA TACAGTCACA TACAGTACAT ACACACTCAT ATATAAATAC AAATACAATA ATTCTAACAC TCCCCCTCAA
GCTGGAGCAT ACAGATTGTA TGTACTAAGC TTGGAATAGA TGAACTCGGT GTTGAACTAG ATGATTTGTC TTCAAGAGTG
TGAGGCAAAC ATAGATGGAC TAACAGCAGC TTGTGAAACT TCAACTTCAA AAGTGGATGA AGAAAAGGCA GTGGTGGCCA
ATGACAAACT GCAAGGACTG ATTCTCCAAT CAATGATGGA TGAGTGACGG GATCAACAGT GGTAGCTGAA AGCTAAGAGC
TACAAAACTG CAGGGACTAC ACTAAATCCT CATCAATGAT GGCTGGGTGA CGGGATCAAC AGTAGTAGCT GAAATCTACA
AAACTGCAGG GACTACACCC ATATACATGT GACTTGCAGT GTCTTGGAAA CGTACTCCCC CTTAGTGTGA ACGGCGGAAA
TGTGGCGGAA ATGTGGAATA TCACAGTTGC TGGACCACTA AAACAAAACA CAAGATTAAG CTATAATGCT GAAACAAAGG
CACTAAAGAT CCAAATTGGA GGTCCAAAAT TCTTTGCTGG ACAACTTCCA AGTGGTGATA CGTAGCAGTG TATCACAAGA
AGATCGAGCT AACTCTAGCA CCGAACAACG GCTGTGCCGA ACAGCAGCAA ATAGTGCAAG AAGATCGGGC TAACTCTAGC
ACTGAACAAC GGCAAACAGT GCCGAACAGA GGCAAACTAT GCCTGGACAA CGGAGAAACG ATCGGGTCGG GACAGCGGCA
AATGGCGCCT AGACAGTGAC AAACGGCGCG GGACAGCGGC AAATGACGCC TAGACAGAGG CAAATGACGC CTAGACAGAG
GCAAATGACG CCTAGACAGA GGCAAACGGC GCGGGACAGC AGCAAATGGC GCCTGGACAG CGGCAGACGG CGCAGACAGA
AGCAAACAGA GGCTGGACAG CGGAAAACGG TTACGCCTGT ACATCAACGG TGGAGACGAA GATGGCAGCA ATGGCTGCTC
TGAGGGTCGG AACAAAGAGA GGGAGCTCCG ACGACGGCTA TGGAGGTGTC GCGGTGAAAC TCCGGTAGCG GGAAGGCGGC
GCGTGCAGAA CACGCGGCCG AGACTGGCCG AGAAGAAGCG GCGCGTGACA GCTGGTGCGG AGGTTTGGGA CGCCGGCACC
GGTGGGGTTG GTCGTCGCGT GAAGAGGCGA ACCAGATCCA GTGGTCGCTG GTCGGAACGG TGACGGTGGC CGGCGACAAG
GCGGCGCGTG GCTATACGCG TCCGAGATCT GCCGGAAAGA GGAGGCGCGT GGAGGCGCGT TCAGAGGAAT CTGGTGTTGT
CTCCGGCGAG GTTGGCCGTC GCTCGAGGAG ACGCTCCAGA TCCGATGGTC ACCGGTCGAA TCGGTGACGG CGGCCGGCGG
CCGGCGGCAG ACTAGCCGGA AAGAAGAGCT CCGTGGCGGC GCGTTCGGAG GATTCTGGTC CTGTCTCCGG CAGGGGTGGC
CGTCGCTCAA GGAGACGGTC CAGATCCGCT GGTCACCCGT CGAAACTGTG ACGGTGACCG GCGGCGGCTG CGGCAGGGAC
GGCGGCGGCG GCGACGGAGT CAGCAGCGAT GGCAGCGGAA AGTGGCGGCG ACAGCAGTGG CACACTTGGT CTGGACGGGT
GCACAGAGAA GAAGAGAAAA TGGAATTTGA GGGGCTGTCA CCGGAAACTG TAGGGGCTGC CGGCGGCCAT GGCGGCCGGC
CACCGGCAGA CAGCAGAGAC CCTAGAGGTA GATCAGAGAA CCTGCTCTGA TACCATGTGA AAATGGAATT GTATTGAATG
AAAATGGTTC TCTTCTTGTT ACATCCTTCT CCTTAATCCT ATATTTATAG GGTTAAGTGA ATGGAATACA CACTCACATA
CAGTCACATA CAGTACATAC ACACTCATAT ATAAATACAA ATACAATAAT TCTAACAATA GTGAAGGTAG CAAACTTATA
TAGTGGTAGT ATGCAATTGT ACGACAACAT GAAAATATTT ACACCTACAC TTCATTGTAA TGAAGTTCTA AAATATTAAT
GGACTTACCA TGCTAATAAT CTTTTGATTG GATGATTGTG CAAAATAGGT TTACATGGTT AAGGCATTCT CATTATATTC
TAGAACAAAT TCTCTTTGAA ATTTTTGCTA TGACATGATA GTGCCAAACC GCCAACTTTC AGCCACCCCT ATAGTTTTTC
GTATTAGTGT TAATTATGTA TTTTATCACA AATATCTCTT TTTTGTAACC TTATCAATAC TGTCCTCTGC ATGTCTACTC
TTAGAAAAAC TGGCCAGGTT GAAACAAGCC AAAGAAGAGG CTGACAAAGA GATTGCAGAG TACCGAGCTC AACTGGAGCG
TGAGTTTCAA AAGAAAGTTT CAGACGTAAG TCTATATGAT TATATTTGAT GGTCTTAGAC TAGTCCATTA CAATATTCTA
ATTTGTGATG TTACATTACA TTAATAATAC AGAGTACTGG TGATTCTGGA GCTAATGTCA AGCGGCTTGA GCAAGAAACT
GAAGCAAAAA TTCAGAACCT GAAAACGGAG GCTGCAAAAA TTTCGGATGA TGTTGTCGCC ATGCTTCGTA CGTATGTTAC
AAGTGTGAAA AATTAGGACC CTTTGATATA CATTGGTGCC GAGGACCCCT AAATTATGAT TATTATTATG CTGAGTTTAT
TCTTTACTCT AGATATTGTG GTGAGGATAA GATTCTTGTT TTGGTTATAA TGCTTAGTAC CTTGCTGCGC TGTGTTCAAA
GAAATAACTT GAAATTTGTT AAAATAAACA GTTCAGGATT AAAAGACGTG TATATTTTTG TGTTGCCGTT TTAACGAGTG
CATGAGGACC AATTCCTCCC CTGTTTATAA ATGTCGAGTC AAATTGTATG GCAAAATTCC AATATTCAAA TGCAGTACAA
GCCATACAGT GGCACGTCTA TCAAAGGTAC ATTAATGGGT AAGAGGATGC TTGTTTATAG TTTTGTGACT TTTTGTTGTC
AATGACAGTC CTACTGCCGA ATTTAAGCTA 

>Vigan.08G277600.01
AAACACCTTT CAGTCACAGG TACGCTCCTC TCTTCTTCCC TTTCAGATCT ACGCGATTCT ATTGCTTCCC CTCTCCAATT
CCACGCCGTT TCTTGTGCCT CTTTTCTCTT TCTTCTCTCT TCGTTATGCA TAAATATAAA TTAAATACAA ACGCTGAACT
GCACCTTAAC TAGATTTGGA TCTTTGCTTC TTAAATTATT GTATCAACGG AATTTCTGGT TAGCTTTTCT AGGTTTTTGA
TCTAAAACGA ACTAATAATA ATAATAACGA TTTGGAGAAG TTTTTCAGGG GAAGTGACTA ATCTTACTGA CTAAATAAGA
AAATTAATGC TTAATGAATT GATATTCCAA CACATCTATG CCTGTATGTG TTTTCACGTT CGTGGTACTT AGTTACACTT
GAAAGTGAAA TTTTCACTTC AGAGAAGTTA GATCCAAATT ATACCGTGTA AAATTTGTGA TTCTGTAATT GGATGATCCT
GTTTGCCGTT AATTTCATTT TTAAGTTCAC TGCCCCGTAT TTGGTTGCAT TTTTTTTGCA AGATCGTGAA TCGCGCCCGA
ATCTTTACCT CAACTACAGT TTAAAATTGA ATCATGTGAA ACTGCAATTT AAAATACTTT ACACATTAAA AACCTAATTT
TAATGGTTGC AGACGTAGTT TGAAGGTGTT TTTGTCTTTG CAAATCAAGC TAATTACGGT CTATGTATTG CTGCATGCTT
CCTTCTGTAT GATGTTGCTA TAATTAATTC GTCTAATGAT TTTTCTCGCC CTTTGTTTGG AAGGAGAAGA GTATTTGTTT
GGTTTTGTAA CATCTTTAGT TCAAAATTTC AAGTTTGATG ATAGAATCAG TTGTGTCTTG TTACTGTTGC ACTCCTTTCA
CTTTTCCGAA TTCCTAGGTA GAATGAAGGC GGTTCTTTTG CCTAATTATT GATGTGTTGT CGGAGGAGTT GCTTCGTGTT
AACCAATTCA CCATTTGTAA ATAGTTTCTG TCTGTGTCAT GACAGAATGG CATCCAACAG GGGTCAAGGT GGAATTCAAC
AGTTGTTGGC TGCAGAACAA GAGGCCCAAC GGATTGTGAA TGCTGCAAAA GCTGAAAAAC TGGCCAGGTT GAAACAAGCC
AAAGAAGAGG CTGACAAAGA GATTGCAGAG TACCGAGCTC AACTGGAGCG TGAGTTTCAA AAGAAAGTTT CAGACAGTAC
TGGTGATTCT GGAGCTAATG TCAAGCGGCT TGAGCAAGAA ACTGAAGCAA AAATTCAGAA CCTGAAAACG GAGGCTGCAA
AAATTTCGGA TGATGTTGTC GCCATGCTTC GTACGTATGT TACAAGTGTG AAAAATTAGG ACCCTTTGAT ATACATTGGT
GCCGAGGACC CCTAAATTAT GATTATTATT ATGCTGAGTT TATTCTTTAC TCTAGATATT GTGGTGAGGA TAAGATTCTT
GTTTTGGTTA TAATGCTTAG TACCTTGCTG CGCTGTGTTC AAAGAAATAA CTTGAAATTT GTTAAAATAA ACAGTTCAGG
ATTAAAAGAC GTGTATATTT TTGTGTTGCC GTTTTAACGA GTGCATGAGG ACCAATTCCT CCCCTGTTTA TAAATGTCGA
GTCAAATTGT ATGGCAAAAT TCCAATATTC AAATGCAGTA CAAGCCATAC AGTGGCACGT CTATCAAAGG TACATTAATG
GGTAAGAGGA TGCTTGTTTA TAGTTTTGTG ACTTTTTGTT GTCAATGACA GTCCTACTGC CGAATTTAAG CTA

>Vigan.08G277600.01
ATGTGTTGTC GGAGGAGTTG CTTCGTGTTA ACCAATTCAC CATTTGTAAA TAGTTTCTGT CTGTGTCATG ACAGAATGGC
ATCCAACAGG GGTCAAGGTG GAATTCAACA GTTGTTGGCT GCAGAACAAG AGGCCCAACG GATTGTGAAT GCTGCAAAAG
CTGAAAAACT GGCCAGGTTG AAACAAGCCA AAGAAGAGGC TGACAAAGAG ATTGCAGAGT ACCGAGCTCA ACTGGAGCGT
GAGTTTCAAA AGAAAGTTTC AGACAGTACT GGTGATTCTG GAGCTAATGT CAAGCGGCTT GAGCAAGAAA CTGAAGCAAA
AATTCAGAAC CTGAAAACGG AGGCTGCAAA AATTTCGGAT GATGTTGTCG CCATGCTTCG TACGTATGTT ACAAGTGTGA
AAAATTAG

>Vigan.08G277600.01
MCCRRSCFVL TNSPFVNSFC LCHDRMASNR GQGGIQQLLA AEQEAQRIVN AAKAEKLARL KQAKEEADKE IAEYRAQLER
EFQKKVSDST GDSGANVKRL EQETEAKIQN LKTEAAKISD DVVAMLRTYV TSVKN*