GBrowse Details

Vigan.08G276700.01

Basic Information:
Name: Vigan.08G276700.01
Multiple alignment
Variant Information
Position: Chr08:32207971..32210119 (+ strand)
Length: 2149
Functional Information:
Description: Similar to uncharacterized protein. [A2XAR5, Oryza sativa subsp. indica]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.73,1.34,6.91,4.63,10.75,9.03,17.26,8.05
Arabidopsis thaliana homolog: AT2G37195.1
Automatic updates:
Name: NM_001249917 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305799 (LOC100305799), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:32207971..32208121 (+ strand)
Length: 151
Type: five_prime_UTR
Position: Chr08:32208122..32208249 (+ strand)
Length: 128
Type: CDS
Position: Chr08:32208605..32208716 (+ strand)
Length: 112
Type: CDS
Position: Chr08:32209245..32209313 (+ strand)
Length: 69
Type: CDS
Position: Chr08:32209689..32209778 (+ strand)
Length: 90
Type: CDS
Position: Chr08:32209779..32210119 (+ strand)
Length: 341
Type: three_prime_UTR

>Vigan.08G276700.01 class=Sequence position=Chr08:32207971..32210119 (+ strand)
GGGTAGATGG ATTTCAAGGC CAAGCAAGGT CCAATGTAGG TGATAGTCAC CGGCAACTTT GGTTGTTTGA AAACCTCAAC
AACTTTGTTG GTAGAAGAAT CGAATGGAAT GAGTGAGTGA AGAAGATCAG AACAGAACAC AGCACAGAAG AATGATTGAA
GCGAAGAGGA GTTCGATCTT AGCCACACTC GCTTTTCTAA TGTTAATGGG CGTTGCAGTC TATTTTAGAC TCTGGGCCAT
TCACTACAAC CTTTCTGCTG ATGACACTCA AATCATAAGG TTACCATTTC TTAAAAAAAT TTTCATTCCC ATTTTTTTTT
TCTGCAATTT TCCTTTGAAA ATGAAATATA CCCTTGTTAT GTTCCAATTT TGAACTTCTA AGGGTTGTTA TGTTATTATA
CCAATCATGT GAAGCACAAA TTGTTCTTTA TAAGTGGCCC ATGGAAATAT TAATCTGTTC CAATGTTTCT CTGTATTATG
ATTTAACCAA TTGAGGGCTG TGATTCAGAG GAAAGATTTT GTAATGGTCA TGGCTTGAAT TGACTTGTTC TGTGACATTT
AATCACTGTT ATGGTAAGAT TATAAGATTA TTGTTTCTGT TATAATGATG TTTGGTTTAT TCGTGTGTTT GCAGGCAACA
GTTTGATATT GCTAACAGGG AGGCAATGGA TGAATCTGCT GAGTGGAGGC TGAGGTACGA TGAGGAGGTG GATAGGACGA
AGAAGTGCTT GCAGGAGCTT CAAGTGGTAT TTTTTTTTTA ATTTGGATTT TCACTTTCTG CCTTGCAAAC TGAATTAGAA
AAGATTTAGG GTGTTTTTGA TTTCGATTTT CATAAACTGG TTTTAGTTAT TCAAGGAAAA GCAAATGAAG CAAACAAAAA
AAGATCAGAA ACCATCTATC ACCTGTTTCT GTTGTTCATT TTTAAAGCAT GTTTTGAAGA TAATTTTCAA AACCCGAATA
CGTTTTGGGT GAGAGATTGT TGAGTAGCAT GGAATTGTTT TTAAAAAACA GTTTTCTAAA CCAAAAAGTG AGAAGAAAAT
CAAACATGCC TTTCTTTAGT TCCAAGTTCT ATCTTATTCT TTGGTTGGTA TTGTTTCACA TCTTAGCCTT CTGAATTTCA
GTAGATAGCC TTGTGATATA ACTGCACCAG GATAATAGAA TTGGCACTCA ATCAAGCAAG ATTGTAGAAA TCAATACTTA
TTTTTCCAAC CAATGAAATA TCAAGCATTC TCTTTGGCTT TCCTGTAATG ACCATGTAAT CATGTTTGTG ACAGTTTCAG
GAGTCCTCTC AGAAGGGGCA GAATGCTTCT CATATTAACC ATAAATTGGC AGTACTGCAA AAGGTTTGTC TTCATAAAAA
TATCAATCAA TCTTAGATCT ACGTCCTCTT GATAATCATT CTATTTGGTC ATCCATCCTA AGGAACTAAA ACTAAAATCT
TTGAAGGATA ACTGAACTTC TAATTATGCC AGATATGCAA TGTGGTGCCA ACTTATATCC ACTAATCACT CCAAGTTTCA
AAATCCAAAC TTTATTGCCA ATGGTGCTGA TTTATTTATA TCAAATGCTA TAATTTAATC TATCAACAAG GACGATTTCC
TACCTTGTTC ATATAATGTT GGGGCAATTA TTTTGGGTTC TCATTGGTTA TGCGTAATTT GTGCGATTTT TATGGCATTA
TTTAAGTCAA GTGTTGAGAT GACCTTCTAA CCTACCAGGA GAATGCAGTC TTACTTGAAA GGTTGGAAGC ATTGAAAAGA
GAGCTTGAAG AGGAAAGGTT GAAGTGCAGT ACACGATCCA TGAAATAATC ATGAAAGTGT TGACTAGAAG TATATTTTGT
CTTTTTGTCC TTGGTGTTCA ACCATGGAAG AATCTTGACA GTATGATTTA TGATCTCCAC CTTACACACA CGGATCATTC
ACGGAATATG GAAATACGTG AGTCACACTA ATCATTCCTT CTTTATTTTT TTTAAGGGGG TTACATTATC CTGTGTACCT
TATTATGGAC AAATGTATAT TTTTTTAACC TCCATATGTA CCTGATAATT TCATATTTTA ATTTCTTTAA AGAACAAATG
TTCTGTGTAT GCTTAGATTA TGTGTTGTGG GTCACCATCT AATTAATCCA GTCTGTCTTT GCGAATTCA

>Vigan.08G276700.01
GGGTAGATGG ATTTCAAGGC CAAGCAAGGT CCAATGTAGG TGATAGTCAC CGGCAACTTT GGTTGTTTGA AAACCTCAAC
AACTTTGTTG GTAGAAGAAT CGAATGGAAT GAGTGAGTGA AGAAGATCAG AACAGAACAC AGCACAGAAG AATGATTGAA
GCGAAGAGGA GTTCGATCTT AGCCACACTC GCTTTTCTAA TGTTAATGGG CGTTGCAGTC TATTTTAGAC TCTGGGCCAT
TCACTACAAC CTTTCTGCTG ATGACACTCA AATCATAAGG CAACAGTTTG ATATTGCTAA CAGGGAGGCA ATGGATGAAT
CTGCTGAGTG GAGGCTGAGG TACGATGAGG AGGTGGATAG GACGAAGAAG TGCTTGCAGG AGCTTCAAGT GTTTCAGGAG
TCCTCTCAGA AGGGGCAGAA TGCTTCTCAT ATTAACCATA AATTGGCAGT ACTGCAAAAG GAGAATGCAG TCTTACTTGA
AAGGTTGGAA GCATTGAAAA GAGAGCTTGA AGAGGAAAGG TTGAAGTGCA GTACACGATC CATGAAATAA TCATGAAAGT
GTTGACTAGA AGTATATTTT GTCTTTTTGT CCTTGGTGTT CAACCATGGA AGAATCTTGA CAGTATGATT TATGATCTCC
ACCTTACACA CACGGATCAT TCACGGAATA TGGAAATACG TGAGTCACAC TAATCATTCC TTCTTTATTT TTTTTAAGGG
GGTTACATTA TCCTGTGTAC CTTATTATGG ACAAATGTAT ATTTTTTTAA CCTCCATATG TACCTGATAA TTTCATATTT
TAATTTCTTT AAAGAACAAA TGTTCTGTGT ATGCTTAGAT TATGTGTTGT GGGTCACCAT CTAATTAATC CAGTCTGTCT
TTGCGAATTC A

>Vigan.08G276700.01
ATGATTGAAG CGAAGAGGAG TTCGATCTTA GCCACACTCG CTTTTCTAAT GTTAATGGGC GTTGCAGTCT ATTTTAGACT
CTGGGCCATT CACTACAACC TTTCTGCTGA TGACACTCAA ATCATAAGGC AACAGTTTGA TATTGCTAAC AGGGAGGCAA
TGGATGAATC TGCTGAGTGG AGGCTGAGGT ACGATGAGGA GGTGGATAGG ACGAAGAAGT GCTTGCAGGA GCTTCAAGTG
TTTCAGGAGT CCTCTCAGAA GGGGCAGAAT GCTTCTCATA TTAACCATAA ATTGGCAGTA CTGCAAAAGG AGAATGCAGT
CTTACTTGAA AGGTTGGAAG CATTGAAAAG AGAGCTTGAA GAGGAAAGGT TGAAGTGCAG TACACGATCC ATGAAATAA

>Vigan.08G276700.01
MIEAKRSSIL ATLAFLMLMG VAVYFRLWAI HYNLSADDTQ IIRQQFDIAN REAMDESAEW RLRYDEEVDR TKKCLQELQV
FQESSQKGQN ASHINHKLAV LQKENAVLLE RLEALKRELE EERLKCSTRS MK*