GBrowse Details

Vigan.08G257000.01

Basic Information:
Name: Vigan.08G257000.01
Multiple alignment
Variant Information
Position: Chr08:25981373..25986972 (- strand)
Length: 5600
Functional Information:
Description: Similar to Protein disulfide isomerase-like protein. [I7GEK3, Glycine max]
GO: Biological Process: glycerol ether metabolic process (GO:0006662)
Biological Process: cell redox homeostasis (GO:0045454)
Cellular Component: endoplasmic reticulum (GO:0005783)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
Molecular Function: isomerase activity (GO:0016853)
InterPro: Thioredoxin (IPR005746)
Disulphide isomerase (IPR005788)
Endoplasmic reticulum, protein ERp29, C-terminal (IPR011679)
Thioredoxin-like fold (IPR012336)
Thioredoxin domain (IPR013766)
Thioredoxin, conserved site (IPR017937)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:60.32,70.24,69.50,33.22,96.38,134.35 ,94.21,58.26
Arabidopsis thaliana homolog: AT2G47470.1
Automatic updates:
Name: NM_001249360 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein disufide isomerase-like protein (LOC100037470), mRNA.
PubMed ID: 17181539 NCBI(pubmed)
Status: Known Variant
Name: NM_001249371 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein disulfide isomerase-like protein (LOC100037471), mRNA.
PubMed ID: 17181539 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:25981373..25982437 (- strand)
Length: 1065
Type: three_prime_UTR
Position: Chr08:25982438..25982503 (- strand)
Length: 66
Type: CDS
Position: Chr08:25982791..25982890 (- strand)
Length: 100
Type: CDS
Position: Chr08:25983141..25983265 (- strand)
Length: 125
Type: CDS
Position: Chr08:25983394..25983550 (- strand)
Length: 157
Type: CDS
Position: Chr08:25983928..25984019 (- strand)
Length: 92
Type: CDS
Position: Chr08:25984123..25984150 (- strand)
Length: 28
Type: CDS
Position: Chr08:25984302..25984419 (- strand)
Length: 118
Type: CDS
Position: Chr08:25984762..25984817 (- strand)
Length: 56
Type: CDS
Position: Chr08:25984950..25985047 (- strand)
Length: 98
Type: CDS
Position: Chr08:25985773..25985857 (- strand)
Length: 85
Type: CDS
Position: Chr08:25986478..25986644 (- strand)
Length: 167
Type: CDS
Position: Chr08:25986645..25986972 (- strand)
Length: 328
Type: five_prime_UTR

>Vigan.08G257000.01 class=Sequence position=Chr08:25981373..25986972 (- strand)
ATATATACAT GTATTTGTAC GCGCGTAACG TGTCTTTTCC ACGTGGCTCA CATGTCTAGA TATTGACACC GTGTTCCTTT
GAAAGGTTGC CACGTCAACG ATAAGACGTC ACAGGTAAGA AAGTAGAATG ATGTGGTAGC GGCGTGGGAA ATGCAAAAGC
CAACGATGAA TTTGATTACA AGCGATGCAA TAAAACGGTG CCACGTGACA AATACGGTAG CGATACATTT AATGCTTCAA
ACGGTGTTTC GTATATAAGC CTGCACGTGC CGAAGCAGTT GAGCTGAAAT CGAGAAGAAA GAAAATAGCG AAGACCAGAA
AGAAGAAGAT GGAGAAGTAT CAGATCTGGA GCAGTAGGAT AGTGTTGGGA GCTTTCGCGT TTGCGCTACT GTTTCTAGCG
GCCTCAGCAG ACGACGTCGT TGTGCTCTCT GAAGAAAACT TCGAGAAGGA AGTTGGTCAG GACAGAGGAG CTCTCGTCGA
GTTCTATGCT CCCTGGTAAC TTACAATCTT TTCGATCTCT TACTCTCTGT TTCCATTAAC TACCGCTTCT TCCATTATTG
TTTTTGAAAT CGTTAGGTAG GGTTTTTGTT GACGGATTCC GGTGTTTTCC TTTATTTTCT TCGCTTCGTT CCGATCGCAT
GTGTTCTTTG CGTTTAGCGT TTCAACTTGT CGTTTAACTT CTATTGGTTT GTAGTTACTT ATCGACTTAT AGATGATACA
ATACGATGCT GTTTTGACTT TTGGTGCAAT TTAGTTCCTC CAGATTCTAT TGGAAGCAAT GTCCTTCAGT TTAGTTTGTA
AACTTATTTT TGAAATTAAT AAATTAAATT AAAACCACTA CTCTACTTTA TTTAAATTCA ACTAATTTAA CTAATCAACT
GTTTGGATCC TTTGGTCAAA TAATTAGAGG ATAATATCCC CTGTAATTAT ACAAGAAGGA CTGAATGCTG CATAACCCTG
TCCAAAACTC TTGCATAAAA GGTCGTGATC AGTCATTGTA CATTTAAAAC TTCATGAGAA TAACCTGTTC GTTGCACCAG
TCACTGGTGA ATTTCTTTAT GTTGTGTTGT ATACTAATGT TCTGAATATG TTTTATCCCT CTTTTGTCAT AATAGGTGTG
GACATTGCAA AAAGCTAGCT CCAGAATATG AAAAGCTTGG AAGCAGCTTC AAGAAAGCCA AATCTGTTTT AATTGGGAAG
GTCAGTTCCA TGGTGTTTCT TTCAAAACTT TGAATATTGT TTGCTGTTTT CTTCTGTTTA TTTAATTTCT TTTGTGGTAT
TTTCTAATCT TCAGGCATTT TCTCTATTTA TGATTGTCTG TTTATTTTAT TGAATTGATA GTCTCTCAGT GTGGTGTGGA
GCATGTTCAT TTTATGGACT TCCTTCTTAT CGAAGAAGTC TAAGCTACAA CTTCAACATT TACTACATAA TTGTTCGAGT
TATCTTTTCT CCTACCATGC ACCCTTCGTA TAGAAAAAGT CTAAGCTACA ACTTTAACAT TTACTATATA ATCCTCGAAT
TATCTTTTCT CCTTTCTTGA ACTCTTAGTT TCTTCTTAGC AAATGTCATC TCCTCCTCCC TTCCTTTATT ATCTCTAAAT
ACACACACAA ACAATCAAAA TGGATAGTCA GGATTAGATT TCAGTAAAAC AATCTTAACC ATTCATGTAT AGTTATATAA
TCAAAGATTA GTTCACCTCT CACTCTCCCA CTATATATGC ACCCAATCCT CCAGGCCAAC TACCAAACAC ACTCAAACAC
ATGTGCTGAT CCTTAACCAT AACTAGAAGG GGTTGGAACA TCTATAAAAA CTGGCATGCT TTGTGAATGT GGTTGTATGT
TTTTATTTTT GCCCGTTCTC AACAGCAAGG CAATAATTTC ATTACCCATT AAATGGACAT TAGCTTACTT CTTAATGTAC
TGTAGGTTGA CTGTGATGAG CACAAGAGTT TGTGCAGCAA ATATGGAGTC TCTGGGTACC CAACACTTCA GTGGTTTCCA
AAAGGATCTC TTGAACCCAA AAAGTGAGGA GATCTAGGCT ATTGGAATAT AACATGCAAA TGATTTTACG TCTCATTTCA
TGGTTATTTA TCTTTCGTTT TTCACATATA TCATAACTTC TGCGTTCAAT ACTTGATTTT GGAAAATTAC CACAGGTATG
AAGGGCCACG CACTGCTGAA TCACTTGCTG AGTTTGTAAA TACAGAAGGA GGTACTTTTT GAAGTCTTTG AAGCCTTGTG
CCATACTATC TTTAAAGGAA AAACGCATTG TGATATTAAA ATATCTGTAA CTTCGTAGGG AGTGTAGTAT CTGGAGCATC
TTGCACAAGC TTTTAAAAGA AAAAAAAAAA TTTGTGGGAC AAACTTACAA ACTCACTAAC TTTTAGGTTT CATTCGTGTC
TAAGAAAAAC ATTGACGTAC ACACTTTCCC TAGATCTTTT AGCTTTTAAT CATGTTGGAG ATAAAAATCA TCAGTATTGG
GTTTCCCCTG TGTGTTCTGT GTGCTTCTGC CTTGCAATTT ATATTGATTC CTAACCAGAA AATATGATTG CAGGAACAAA
TGTGAAGATT GCTACAGCTC CTTCCAATGT AGTGGTCCTA ACACCTGAAA ATTTTAATGA GATTGTGTTG GATGAAACCA
AAGATGTCTT GGTTGAGTTT TATGCACCAT GGTACTCAGC AATAATTTTC ATTTGTTTCT ATTTTTTCTT TAACCCATGC
TTTGTTTTGG TCTAGAAGTT GTTTGGTAGA ACTTAGTTCA AATTACATAT TATTTGAAAA CTCTCATACT GCTAGATCTA
ATAAATTTTA CGATTCTTCT AGGTGTGGGC ATTGCAAAAG TCTTGCTCCT GTAAGTATAT CTCTGAGCAT TTCATGTTGT
CAATTTAATG TTGGGCCTTT AATTTCTGTA AAGCCAATAA TATGAAACCT GACTGTGCTC TTTTTACCTT CAGACATACG
AGAAAGTTGC CACAGCATTT AAATTGGAGG AAAATGTAGT CATTGCTAAT CTGGATGCTG ATAAATATAG GGATCTGGCT
GAAAAGTGAG TTTTATCTAT CTGATCTATT ATTCTAATGA GTTGTGTTTG TTCTGGCAAA TCAAACCTTA GCTGCAAAGG
CCGGTAGAAG TGAACTTAGA GGCCCTAGTG CTCGTTTGTA GTTCCTCTTT TCGTGTGATG ATATGAACCT CTTTACCTGT
TTAGCGAATA CATTTCAATG CAGTTCAGAT ATGGGCTTTG ATATAATATG GGAAAAGAAA ATAGTAAAGG AGCTGAAACA
GATGGATGTG CTAATACTGC TAGTGCGGTG GATACGTTAC TAATGTGCTT ACAATGGTTA CGTAAACAAA AAAATTGAGC
TTACTGTAAA GGTTGACGAA TACAACATAA ATAATTGAAG TTTCCTGGAA TAATGTTTGC AGGTTTGATG TGAGTGGATT
TCCTACCTTG AAGTTCTTCC CAAAGAGCAA CAAAGCCGGT GAAGAGTACG GAGGTGGAAG AGACTTGGAT GACTTTGTGG
CTTTTATCAA TGAGAAATCT GGTTCAAGTC GAGATGGAAA AGGGCAACTT ACTTCCCAAG TGAGTGAATT CACATCAATG
AGGAAAAGCT AGAATTTGTT TTGTTTTTGT TTTATCTTTT GGTGGGGGGT GGAAGTTAAA CTTGTTACAC TTAGTATCTT
ATTCCTACGT TTGGTATTTC TGTCTAGGCT GGTAGAGTAG AAAGTTTGGA TGTCTTGGTG AAGGAGTTTG TCGCTGCCAG
CGATGAAGAG AAGAAATCCG TGTTTACCCG AATTGAAGAA GAAGTTGAGA AGCTTCAGGG TTCAGCCTCA AGGTAAACTT
GAATATTCTT GCAAACATCA TCCTGTAGAA TATTTATGAG TGGCGTATGC TTTCAACTGT TACTTAAGAA TAGCTTAATT
CGTATTACTG TGTTGCGTAT ATTCTAGAAA ACATCATCCT TTAGAATATT TTTAAGTGGC ATATGCTTTT AATTGTGTCA
CTTAGACAAT AGCTTATTTC GTATTACTGT AATGATCCAA TTAACTAGAA GTAATTATCC AATTAACTTT TTTTATGATC
AGTTACGGGA AGATTTACTT GAAAGCTGCC AAGAATTCCT TGGTAAAAGG TTCCGATTAT GCTAAAAACG AAATCCAACG
CCTGCAGCGC ATACTTGACA AGGTAATAGA AATATTCCCC CTCGATGATA AATATAATTC ACTGTTTGAT GATTCACCTT
CACCGTAAAA AATTAATTCA CTTTTTCTCG CTGTAAAGCT ATTCCAAACA CTATGATTTT TTTCTCGCTG AGAAGCTAAT
CCAAACATGC TATATATTAT TCAAATTTAA AGACTTCCTT GAGAAAAAAC TTGTAATCTC GAAATAATTG TTTTGCAATA
ATTAAATTTG GTCGTAGTTG AGATGAAAAT TGAAAGTGTA ACTCGCTTTT ATTTTATTGA TTGATGCAGT CTGTTAGTCC
TGCTAAGGCC GACGAGTTTA CTCTAAAGAA AAATATCCTG TCTGCTTATG CTTGATTCAA TGGTGCAATT AACCATCCTG
CTTGGAAACA TGGGATATCC ACCACGACTT TGATATCAAC ATTGCTGGGA GATATTTGAC ATGGAGACTT GTAGTGCTTA
ATTTGAGTCT GTATTAATGA TCCTATCTTT TATTTGGGGA TGAAAGATTA CCATTCTTCT ACCCCCATCG AATTATACCT
GAGCGATTTA AAATTTTGAG GACTACTGAC TTTTACTTCG GCCTTTAGCT ATTTGATTGT GGCCGTAAAT TTATCACGCT
TATAGCATGT CAATTATCTA TTCGATTCTT GTGGTCAACT TTTTCATTTA AAATCCTCAA TTATATTAAA ATAAACTAAC
GAAATAAAAA ATTAGTAAGG TAAAATTCCG AAGCCATACA ACTATTTACT ACATAGAGCT GGGCCATAAG ATAAAAGACG
AACACATTTT GGCCATAGCT AACACAAGCA ACCATCCCGC ATTGGAGACA CTGGATTGAC ACAATACAAT GCTACTTAAC
ACCATTCCTT TCAGTACTCT CTCTCATCAA CTAGAGATTT TATATATGAG CATGATCTTT CCTCAGGATC TATGTTAGGA
GCAGGGTCTT GGTTAGAACC AAAAGGCAGG TCCAAAGATG CAGAGGATGG TTGTGTTCTC ATCTGCACAG ATCTTAGAAG
TGCAGCTCTT CTCAAGTCAG CTGAGTGGCA TATATCACTT GGAGATGATG GGAAGCGACC TTCAGAATCT GACCCTCGCT
GACGAGGCTG GGGGCAAGTT GCAGTGGAAA CGGTTGAGCC ATGAGAAGCA TTTGAACTTG AGGAAGGTGC CGAAGATAAT
ACATTCTGCG ACTTATGGTA CCTATGTGGA GAAGAAACTG GACTACTGGG AAGACTGTCG GGCTGGGACG AACAACTGTG
CACAGGAGTC TCACAAAACC TCAAGTCATC TGAATCTTCT GACATAGGTG AATATTGTAA AGATATATCA TCTCTGAAAA
TAAATTCAAC ACAATTAATT ATTGTAAACG TTGCTAATCA TTGGGTAATA AAACTAATTA ATTTTAACAA CAGATTGCCT

>Vigan.08G257000.01
ATATATACAT GTATTTGTAC GCGCGTAACG TGTCTTTTCC ACGTGGCTCA CATGTCTAGA TATTGACACC GTGTTCCTTT
GAAAGGTTGC CACGTCAACG ATAAGACGTC ACAGGTAAGA AAGTAGAATG ATGTGGTAGC GGCGTGGGAA ATGCAAAAGC
CAACGATGAA TTTGATTACA AGCGATGCAA TAAAACGGTG CCACGTGACA AATACGGTAG CGATACATTT AATGCTTCAA
ACGGTGTTTC GTATATAAGC CTGCACGTGC CGAAGCAGTT GAGCTGAAAT CGAGAAGAAA GAAAATAGCG AAGACCAGAA
AGAAGAAGAT GGAGAAGTAT CAGATCTGGA GCAGTAGGAT AGTGTTGGGA GCTTTCGCGT TTGCGCTACT GTTTCTAGCG
GCCTCAGCAG ACGACGTCGT TGTGCTCTCT GAAGAAAACT TCGAGAAGGA AGTTGGTCAG GACAGAGGAG CTCTCGTCGA
GTTCTATGCT CCCTGGTGTG GACATTGCAA AAAGCTAGCT CCAGAATATG AAAAGCTTGG AAGCAGCTTC AAGAAAGCCA
AATCTGTTTT AATTGGGAAG GTTGACTGTG ATGAGCACAA GAGTTTGTGC AGCAAATATG GAGTCTCTGG GTACCCAACA
CTTCAGTGGT TTCCAAAAGG ATCTCTTGAA CCCAAAAAGT ATGAAGGGCC ACGCACTGCT GAATCACTTG CTGAGTTTGT
AAATACAGAA GGAGGAACAA ATGTGAAGAT TGCTACAGCT CCTTCCAATG TAGTGGTCCT AACACCTGAA AATTTTAATG
AGATTGTGTT GGATGAAACC AAAGATGTCT TGGTTGAGTT TTATGCACCA TGGTGTGGGC ATTGCAAAAG TCTTGCTCCT
ACATACGAGA AAGTTGCCAC AGCATTTAAA TTGGAGGAAA ATGTAGTCAT TGCTAATCTG GATGCTGATA AATATAGGGA
TCTGGCTGAA AAGTTTGATG TGAGTGGATT TCCTACCTTG AAGTTCTTCC CAAAGAGCAA CAAAGCCGGT GAAGAGTACG
GAGGTGGAAG AGACTTGGAT GACTTTGTGG CTTTTATCAA TGAGAAATCT GGTTCAAGTC GAGATGGAAA AGGGCAACTT
ACTTCCCAAG CTGGTAGAGT AGAAAGTTTG GATGTCTTGG TGAAGGAGTT TGTCGCTGCC AGCGATGAAG AGAAGAAATC
CGTGTTTACC CGAATTGAAG AAGAAGTTGA GAAGCTTCAG GGTTCAGCCT CAAGTTACGG GAAGATTTAC TTGAAAGCTG
CCAAGAATTC CTTGGTAAAA GGTTCCGATT ATGCTAAAAA CGAAATCCAA CGCCTGCAGC GCATACTTGA CAAGTCTGTT
AGTCCTGCTA AGGCCGACGA GTTTACTCTA AAGAAAAATA TCCTGTCTGC TTATGCTTGA TTCAATGGTG CAATTAACCA
TCCTGCTTGG AAACATGGGA TATCCACCAC GACTTTGATA TCAACATTGC TGGGAGATAT TTGACATGGA GACTTGTAGT
GCTTAATTTG AGTCTGTATT AATGATCCTA TCTTTTATTT GGGGATGAAA GATTACCATT CTTCTACCCC CATCGAATTA
TACCTGAGCG ATTTAAAATT TTGAGGACTA CTGACTTTTA CTTCGGCCTT TAGCTATTTG ATTGTGGCCG TAAATTTATC
ACGCTTATAG CATGTCAATT ATCTATTCGA TTCTTGTGGT CAACTTTTTC ATTTAAAATC CTCAATTATA TTAAAATAAA
CTAACGAAAT AAAAAATTAG TAAGGTAAAA TTCCGAAGCC ATACAACTAT TTACTACATA GAGCTGGGCC ATAAGATAAA
AGACGAACAC ATTTTGGCCA TAGCTAACAC AAGCAACCAT CCCGCATTGG AGACACTGGA TTGACACAAT ACAATGCTAC
TTAACACCAT TCCTTTCAGT ACTCTCTCTC ATCAACTAGA GATTTTATAT ATGAGCATGA TCTTTCCTCA GGATCTATGT
TAGGAGCAGG GTCTTGGTTA GAACCAAAAG GCAGGTCCAA AGATGCAGAG GATGGTTGTG TTCTCATCTG CACAGATCTT
AGAAGTGCAG CTCTTCTCAA GTCAGCTGAG TGGCATATAT CACTTGGAGA TGATGGGAAG CGACCTTCAG AATCTGACCC
TCGCTGACGA GGCTGGGGGC AAGTTGCAGT GGAAACGGTT GAGCCATGAG AAGCATTTGA ACTTGAGGAA GGTGCCGAAG
ATAATACATT CTGCGACTTA TGGTACCTAT GTGGAGAAGA AACTGGACTA CTGGGAAGAC TGTCGGGCTG GGACGAACAA
CTGTGCACAG GAGTCTCACA AAACCTCAAG TCATCTGAAT CTTCTGACAT AGGTGAATAT TGTAAAGATA TATCATCTCT
GAAAATAAAT TCAACACAAT TAATTATTGT AAACGTTGCT AATCATTGGG TAATAAAACT AATTAATTTT AACAACAGAT
TGCCT

>Vigan.08G257000.01
ATGGAGAAGT ATCAGATCTG GAGCAGTAGG ATAGTGTTGG GAGCTTTCGC GTTTGCGCTA CTGTTTCTAG CGGCCTCAGC
AGACGACGTC GTTGTGCTCT CTGAAGAAAA CTTCGAGAAG GAAGTTGGTC AGGACAGAGG AGCTCTCGTC GAGTTCTATG
CTCCCTGGTG TGGACATTGC AAAAAGCTAG CTCCAGAATA TGAAAAGCTT GGAAGCAGCT TCAAGAAAGC CAAATCTGTT
TTAATTGGGA AGGTTGACTG TGATGAGCAC AAGAGTTTGT GCAGCAAATA TGGAGTCTCT GGGTACCCAA CACTTCAGTG
GTTTCCAAAA GGATCTCTTG AACCCAAAAA GTATGAAGGG CCACGCACTG CTGAATCACT TGCTGAGTTT GTAAATACAG
AAGGAGGAAC AAATGTGAAG ATTGCTACAG CTCCTTCCAA TGTAGTGGTC CTAACACCTG AAAATTTTAA TGAGATTGTG
TTGGATGAAA CCAAAGATGT CTTGGTTGAG TTTTATGCAC CATGGTGTGG GCATTGCAAA AGTCTTGCTC CTACATACGA
GAAAGTTGCC ACAGCATTTA AATTGGAGGA AAATGTAGTC ATTGCTAATC TGGATGCTGA TAAATATAGG GATCTGGCTG
AAAAGTTTGA TGTGAGTGGA TTTCCTACCT TGAAGTTCTT CCCAAAGAGC AACAAAGCCG GTGAAGAGTA CGGAGGTGGA
AGAGACTTGG ATGACTTTGT GGCTTTTATC AATGAGAAAT CTGGTTCAAG TCGAGATGGA AAAGGGCAAC TTACTTCCCA
AGCTGGTAGA GTAGAAAGTT TGGATGTCTT GGTGAAGGAG TTTGTCGCTG CCAGCGATGA AGAGAAGAAA TCCGTGTTTA
CCCGAATTGA AGAAGAAGTT GAGAAGCTTC AGGGTTCAGC CTCAAGTTAC GGGAAGATTT ACTTGAAAGC TGCCAAGAAT
TCCTTGGTAA AAGGTTCCGA TTATGCTAAA AACGAAATCC AACGCCTGCA GCGCATACTT GACAAGTCTG TTAGTCCTGC
TAAGGCCGAC GAGTTTACTC TAAAGAAAAA TATCCTGTCT GCTTATGCTT GA

>Vigan.08G257000.01
MEKYQIWSSR IVLGAFAFAL LFLAASADDV VVLSEENFEK EVGQDRGALV EFYAPWCGHC KKLAPEYEKL GSSFKKAKSV
LIGKVDCDEH KSLCSKYGVS GYPTLQWFPK GSLEPKKYEG PRTAESLAEF VNTEGGTNVK IATAPSNVVV LTPENFNEIV
LDETKDVLVE FYAPWCGHCK SLAPTYEKVA TAFKLEENVV IANLDADKYR DLAEKFDVSG FPTLKFFPKS NKAGEEYGGG
RDLDDFVAFI NEKSGSSRDG KGQLTSQAGR VESLDVLVKE FVAASDEEKK SVFTRIEEEV EKLQGSASSY GKIYLKAAKN
SLVKGSDYAK NEIQRLQRIL DKSVSPAKAD EFTLKKNILS AYA*