GBrowse Details

Vigan.08G245800.01

Basic Information:
Name: Vigan.08G245800.01
Multiple alignment
Variant Information
Position: Chr08:23928906..23930220 (+ strand)
Length: 1315
Functional Information:
Description: Similar to glutathione S-transferase PARB-like. [XP_004495977.1, Cicer arietinum]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,1.64,0.00,0.08,0.00,0.00,0.00
Arabidopsis thaliana homolog: AT1G02930.1
Automatic updates:
Name: KM818397 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phi class glutathione S-transferase (GSTF2) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001317557 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glutathione S-transferase-like (LOC100799868), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:23928906..23928935 (+ strand)
Length: 30
Type: five_prime_UTR
Position: Chr08:23928936..23929085 (+ strand)
Length: 150
Type: CDS
Position: Chr08:23929182..23929230 (+ strand)
Length: 49
Type: CDS
Position: Chr08:23929579..23930036 (+ strand)
Length: 458
Type: CDS
Position: Chr08:23930037..23930220 (+ strand)
Length: 184
Type: three_prime_UTR

>Vigan.08G245800.01 class=Sequence position=Chr08:23928906..23930220 (+ strand)
GAAAAAAATA ATTAATTTTC TGATTCAATC ATGGCGACAA TTAAACTTCA TGGAAGCCCC TTCTCAACAG CCACCATGCG
AGCTACTGCT TCCCTGTACG AGAAGGAGGT TGAATTTGAG TTTGTTCACG TTGACATGAA AAATGGTGAA CACAAAAAGG
AACCCTTCAT TTTGCTCAAC GTAAGCATTA AGTAAAATTT TGTTGTGACT ACTCCAGTGA TATTTTCCCT TGTTTAGCTA
ATTTTCAATT CTGCTATTCA CCTCCATCTG ATGCAGCCAT TTGGGCAAGT TCCAGCGTTC GAAGATGGAG ATTTGAAGCT
CTTTGGTATG ATATATATGA TTAAATATAT ACACTCATTG ATATATACTA AGAAACAATA CATTCTTTTA ACAGGTTTTC
TTCTGCTAAC ACTTATCAAG GATCCTTTCT ACTTTGGACC ATACTATATC AGTTTAACAA TCGACATTGA TTATGATGAT
GTAAATTACA TTCTATATAT GTTCATCTGT TAGAAAATTA CGGTTAAAAT TTCTAGAAAA TTACAGAATC ACAAGTGAAT
TTCACCAAAT TTTATGACTT TTAAGAAATT TCAGTATAAT GATATTATAT GGTATAGCAT GTGTAAATGT ACATTAGTAG
ACAGGAACAT GGAACTAACA ATTTGAAACA CAGAATCAAG GGCAATAACT CAATATATTG TTCATGAGTA TGCTGATAAG
GGGACCCAAC TGATATGCAA CGACTCGAAG AAGATGGCAA TAGTGAGAAT GTGGATGGAA ATAGAGAGCC AAAAGTACGA
TCAAGCAGCT TCAAAACTTG TATGGGAGGT TGCAGTAAAG CCTATGTATG GGATTCCTAC GGATCCGGCG GCTGTAGAAG
AGACAGAAGG GAAACTAGGT ACTATTCTTG ATTTCTACGA GAAAACACTG TCTCAAAACA AATACTTAGC AGGTGAGTGT
TTCACCTTGG CGGATCTGCA TCACCTTCCC ACCCTTCATT ACTTGATGAA CACACCGAGC AAGAAGTTGT TTGAATCACG
ACCACATGTT ACTGCATGGA TTGCTGATAT TACAGCAAGA CCAGCTTGGT CTAAGGTTCT TGCCATGCAG CCCAATCTAA
GCAGTAAATA GAGACCGACC CATTTCACCT CATGTCGTGT TCTCAATAGT TCAAAAGATG CATTGCCACC ATAAGTTCAT
CAAATTCGTT GCGCGGCTTC CCATATTCAT CTTTTCAAGT TTTATGTAAT GGAAATTTGC TGTTGTTATC GTTATCTTTT
GAACAAATTA CCCTTGCATA TGTTATATCT TCCAA

>Vigan.08G245800.01
GAAAAAAATA ATTAATTTTC TGATTCAATC ATGGCGACAA TTAAACTTCA TGGAAGCCCC TTCTCAACAG CCACCATGCG
AGCTACTGCT TCCCTGTACG AGAAGGAGGT TGAATTTGAG TTTGTTCACG TTGACATGAA AAATGGTGAA CACAAAAAGG
AACCCTTCAT TTTGCTCAAC CCATTTGGGC AAGTTCCAGC GTTCGAAGAT GGAGATTTGA AGCTCTTTGA ATCAAGGGCA
ATAACTCAAT ATATTGTTCA TGAGTATGCT GATAAGGGGA CCCAACTGAT ATGCAACGAC TCGAAGAAGA TGGCAATAGT
GAGAATGTGG ATGGAAATAG AGAGCCAAAA GTACGATCAA GCAGCTTCAA AACTTGTATG GGAGGTTGCA GTAAAGCCTA
TGTATGGGAT TCCTACGGAT CCGGCGGCTG TAGAAGAGAC AGAAGGGAAA CTAGGTACTA TTCTTGATTT CTACGAGAAA
ACACTGTCTC AAAACAAATA CTTAGCAGGT GAGTGTTTCA CCTTGGCGGA TCTGCATCAC CTTCCCACCC TTCATTACTT
GATGAACACA CCGAGCAAGA AGTTGTTTGA ATCACGACCA CATGTTACTG CATGGATTGC TGATATTACA GCAAGACCAG
CTTGGTCTAA GGTTCTTGCC ATGCAGCCCA ATCTAAGCAG TAAATAGAGA CCGACCCATT TCACCTCATG TCGTGTTCTC
AATAGTTCAA AAGATGCATT GCCACCATAA GTTCATCAAA TTCGTTGCGC GGCTTCCCAT ATTCATCTTT TCAAGTTTTA
TGTAATGGAA ATTTGCTGTT GTTATCGTTA TCTTTTGAAC AAATTACCCT TGCATATGTT ATATCTTCCA A

>Vigan.08G245800.01
ATGGCGACAA TTAAACTTCA TGGAAGCCCC TTCTCAACAG CCACCATGCG AGCTACTGCT TCCCTGTACG AGAAGGAGGT
TGAATTTGAG TTTGTTCACG TTGACATGAA AAATGGTGAA CACAAAAAGG AACCCTTCAT TTTGCTCAAC CCATTTGGGC
AAGTTCCAGC GTTCGAAGAT GGAGATTTGA AGCTCTTTGA ATCAAGGGCA ATAACTCAAT ATATTGTTCA TGAGTATGCT
GATAAGGGGA CCCAACTGAT ATGCAACGAC TCGAAGAAGA TGGCAATAGT GAGAATGTGG ATGGAAATAG AGAGCCAAAA
GTACGATCAA GCAGCTTCAA AACTTGTATG GGAGGTTGCA GTAAAGCCTA TGTATGGGAT TCCTACGGAT CCGGCGGCTG
TAGAAGAGAC AGAAGGGAAA CTAGGTACTA TTCTTGATTT CTACGAGAAA ACACTGTCTC AAAACAAATA CTTAGCAGGT
GAGTGTTTCA CCTTGGCGGA TCTGCATCAC CTTCCCACCC TTCATTACTT GATGAACACA CCGAGCAAGA AGTTGTTTGA
ATCACGACCA CATGTTACTG CATGGATTGC TGATATTACA GCAAGACCAG CTTGGTCTAA GGTTCTTGCC ATGCAGCCCA
ATCTAAGCAG TAAATAG

>Vigan.08G245800.01
MATIKLHGSP FSTATMRATA SLYEKEVEFE FVHVDMKNGE HKKEPFILLN PFGQVPAFED GDLKLFESRA ITQYIVHEYA
DKGTQLICND SKKMAIVRMW MEIESQKYDQ AASKLVWEVA VKPMYGIPTD PAAVEETEGK LGTILDFYEK TLSQNKYLAG
ECFTLADLHH LPTLHYLMNT PSKKLFESRP HVTAWIADIT ARPAWSKVLA MQPNLSSK*