GBrowse Details

Vigan.08G233400.01

Basic Information:
Name: Vigan.08G233400.01
Multiple alignment
Variant Information
Position: Chr08:21899874..21902022 (- strand)
Length: 2149
Functional Information:
Description: Similar to nucleolar protein 58-like. [XP_004495182.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:66.52,54.65,8.94,13.08,15.44,16.47,21.04,11.55
Arabidopsis thaliana homolog: AT4G04614.1
Automatic updates:
Name: NM_001248889 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306236 (LOC100306236), transcript variant 2, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:21899874..21900019 (- strand)
Length: 146
Type: three_prime_UTR
Position: Chr08:21900020..21900408 (- strand)
Length: 389
Type: CDS
Position: Chr08:21901682..21901778 (- strand)
Length: 97
Type: CDS
Position: Chr08:21901779..21902022 (- strand)
Length: 244
Type: five_prime_UTR

>Vigan.08G233400.01 class=Sequence position=Chr08:21899874..21902022 (- strand)
GTTTCTGAAA AAATTTCATC GGTCTGCGTC TTTGAGGGCA ACCTAAGCTC AGCTCCTAAT AATTCATCAC TTTTTCGTTA
TCATTTTAAA TTTCAAATTT TTATTCTTAG ATTGAACGTG TTGTTGTTTC TGTCGAGCGG TATTTGAGCA TTGCATCTTT
CACTTTTTAT TTGCAGAGAA GCATCATCGG GGGTTGAACC CTTGTTTGTA TTCGTGGTGA TTGTGCCGTG GCGTTATCCG
TACTATGAAG AGGACTATGC CATGGAGTGA CGATGACGAG TCATCATCTT CACATTCAGA CTCTGAACAT GATAGTGAAG
CTGGAGCGGA AAACTCCAAA GGTATTATTT AATGTACATC CTCCTTTTTT TGTCTGGTAG TTTTTATCAC TCTGCTGATT
GCTCAAACTT TGATTCAATG TGAAAGTTAT ACACTTTACT TGTTTATGAC AATAATTCAT GGGGGAGTGA CAGGTGCACA
AAGTATCTTC ACAAATTTGA TCCAATTTAG CATTGGATTT TGTTGGGGTT ATGTCGCACT CCCATGTTTT GTGTTTTGTG
CTGTGGGTAT ATTTGATGAA ACTCACAACA TAAATAGCGA TTGGGTTATC TTTCCTACTT TTACAGTTAT CTTCTTGGTG
CCTAGAATGT GGATTGATGC TGTCGCTCAT CCTAGCAATA TGAAACTCTG TCATTGGTTT AACCCTATGG TGTTGATGTG
GAATTTTCTG AACTTTTGGA GAAGGGTATA TTGGGCTTCA CCCAATGGTG GATAAAAATC CCTTGTAAAA TCACACTGAT
GAATATCTTT TTTCTAATAA ATCCTTCCTT GATATCTAAT AGCTTATAAG TATTGGCTAA AGCAAAAAGA TAACTGAGGG
TTGATCTTAT GGTTGAGAGT TGACACAATT TGATCACGTG CTAATTGTCT GTTTTTAACT GATATAGATA GTGATTACTG
ACGTAGATTC AGTTGTTGAG GGTTTAAACT CACCCCCAAG TTGTTAGTGC AATATAGTTT CTGATCTGTC ACTATACAGT
TGCTGATGGA TAAAGTCTTT GGCTAGGAGG AATTACCCAT CTGGGTAATA ATACATGGAC CCTCCATTAT TTCAAACAAC
CATTTGATCC ATCGATTTTT CTATATCTCC TTTTTTCATA TCATGTATTT TATTGCATCT ATCACTTTTC TCTTTTATTT
CCATATCTCT CTAGGTAGGG GTATGTATGG GTGTCTGCTA ACATTACTCT TACCTATCTA TTGCTAGCCT CAATTATAGG
AGTTGATTCT GATTTCTCTA CATCGTACAT GCATAAAAAG GATCGAGTAA TTTAAGGACA CAATTAACCA TGTGAAGTAT
TGTACTATTT TGGCTTCACA TAAATTCTTG CAAGAATTTG TTTGGCATAT TGAACTGTAA TTTTCCGGGA AACAAAAATG
AGAATATCAG AATCATTAAA ACCAATATCA GAAATGAGAA CTGTAATTGA CTTGATCATA GTTGGTGAAA TGGGTTTATT
TCATGAAAAT ACTGGAGAGT ACCGTATAAC TTTAAAGGTT GTCTCCCTAA TTTTGTGGCT GTTTGATCTC TTTATTAATT
ATATTTGTGT ACAGGGAAAT CTAGGAAGCA GAAAAGCGGT GTAATTGACT TTGAGGCTCT GAGGAGACAT GGGTATAGAG
GTGGACCTTC GGTCCTAAAA GTACCGGCAC CCAGAGAAGG GGATGAGTCG AAGCAAGATT GGTCGTGGTC CAGTGGAAAA
GAAAAGCGTG CAGAGAAGGA AATTGAAGAA TCATATGAAG AGCGACAAAA AACAAGGGAG GCTATTTCCC AAGGAGAGCA
GCTGCCAGCT GTCCTGACTA GGAATGACAA GAAGAATCTT TCTTTCTCTC AGAAGGAAAA GAGGAAGAGA GAGCTGGGTC
AAGCTAGCAG AGGCAAAAAT TATGTTGAAG AAGAGAAGAG GCTGTTGAGA GAGAATGGTA TCTATTCTGG TTTTGATGCT
TGATTTTCCA CACCCTTCAT ATTCTTGTAC AAACACACTC TCATTTTCTT CTACTCTACT GAGTTTCAAC TTGTAGTCAC
TGCTTTAAAA CTTGACACAA ATTATTATGA TGTGAAAAAA AAATATTAAA AAAACTCGTA TTGGAGGAA

>Vigan.08G233400.01
GTTTCTGAAA AAATTTCATC GGTCTGCGTC TTTGAGGGCA ACCTAAGCTC AGCTCCTAAT AATTCATCAC TTTTTCGTTA
TCATTTTAAA TTTCAAATTT TTATTCTTAG ATTGAACGTG TTGTTGTTTC TGTCGAGCGG TATTTGAGCA TTGCATCTTT
CACTTTTTAT TTGCAGAGAA GCATCATCGG GGGTTGAACC CTTGTTTGTA TTCGTGGTGA TTGTGCCGTG GCGTTATCCG
TACTATGAAG AGGACTATGC CATGGAGTGA CGATGACGAG TCATCATCTT CACATTCAGA CTCTGAACAT GATAGTGAAG
CTGGAGCGGA AAACTCCAAA GGGAAATCTA GGAAGCAGAA AAGCGGTGTA ATTGACTTTG AGGCTCTGAG GAGACATGGG
TATAGAGGTG GACCTTCGGT CCTAAAAGTA CCGGCACCCA GAGAAGGGGA TGAGTCGAAG CAAGATTGGT CGTGGTCCAG
TGGAAAAGAA AAGCGTGCAG AGAAGGAAAT TGAAGAATCA TATGAAGAGC GACAAAAAAC AAGGGAGGCT ATTTCCCAAG
GAGAGCAGCT GCCAGCTGTC CTGACTAGGA ATGACAAGAA GAATCTTTCT TTCTCTCAGA AGGAAAAGAG GAAGAGAGAG
CTGGGTCAAG CTAGCAGAGG CAAAAATTAT GTTGAAGAAG AGAAGAGGCT GTTGAGAGAG AATGGTATCT ATTCTGGTTT
TGATGCTTGA TTTTCCACAC CCTTCATATT CTTGTACAAA CACACTCTCA TTTTCTTCTA CTCTACTGAG TTTCAACTTG
TAGTCACTGC TTTAAAACTT GACACAAATT ATTATGATGT GAAAAAAAAA TATTAAAAAA ACTCGTATTG GAGGAA

>Vigan.08G233400.01
ATGAAGAGGA CTATGCCATG GAGTGACGAT GACGAGTCAT CATCTTCACA TTCAGACTCT GAACATGATA GTGAAGCTGG
AGCGGAAAAC TCCAAAGGGA AATCTAGGAA GCAGAAAAGC GGTGTAATTG ACTTTGAGGC TCTGAGGAGA CATGGGTATA
GAGGTGGACC TTCGGTCCTA AAAGTACCGG CACCCAGAGA AGGGGATGAG TCGAAGCAAG ATTGGTCGTG GTCCAGTGGA
AAAGAAAAGC GTGCAGAGAA GGAAATTGAA GAATCATATG AAGAGCGACA AAAAACAAGG GAGGCTATTT CCCAAGGAGA
GCAGCTGCCA GCTGTCCTGA CTAGGAATGA CAAGAAGAAT CTTTCTTTCT CTCAGAAGGA AAAGAGGAAG AGAGAGCTGG
GTCAAGCTAG CAGAGGCAAA AATTATGTTG AAGAAGAGAA GAGGCTGTTG AGAGAGAATG GTATCTATTC TGGTTTTGAT
GCTTGA

>Vigan.08G233400.01
MKRTMPWSDD DESSSSHSDS EHDSEAGAEN SKGKSRKQKS GVIDFEALRR HGYRGGPSVL KVPAPREGDE SKQDWSWSSG
KEKRAEKEIE ESYEERQKTR EAISQGEQLP AVLTRNDKKN LSFSQKEKRK RELGQASRGK NYVEEEKRLL RENGIYSGFD
A*