GBrowse Details

Vigan.08G232400.01

Basic Information:
Name: Vigan.08G232400.01
Multiple alignment
Variant Information
Position: Chr08:21766229..21768862 (+ strand)
Length: 2634
Functional Information:
Description: Similar to BI1-like protein-like. [XP_004495172.1, Cicer arietinum]
InterPro: Bax inhibitor 1-related (IPR006214)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:265.42,148.99,47.21,25.99,47.07,131.40,47.84,28.53
Arabidopsis thaliana homolog: AT1G03070.1
Automatic updates:
Name: NM_001250411 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527528 (LOC100527528), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:21766229..21766414 (+ strand)
Length: 186
Type: five_prime_UTR
Position: Chr08:21766415..21766664 (+ strand)
Length: 250
Type: CDS
Position: Chr08:21766763..21766876 (+ strand)
Length: 114
Type: CDS
Position: Chr08:21767750..21767907 (+ strand)
Length: 158
Type: CDS
Position: Chr08:21768006..21768212 (+ strand)
Length: 207
Type: CDS
Position: Chr08:21768213..21768862 (+ strand)
Length: 650
Type: three_prime_UTR

>Vigan.08G232400.01 class=Sequence position=Chr08:21766229..21768862 (+ strand)
CTTTCTTTCA CCTATTCAAT TTCCACGCAC GCGCACCACG GTGGTTTTAT TTATTAATAA AACCCGCTTA ATGAACCACA
CTGATCCCAT TTCATTCCAC GCACGCAAGA TCCAAAAAGC CGTAAGCAAT TTTCTCTCTA TATCCCTACA TTTTCTCTCA
GTTTCTCAGT CGCGAGAAGA AAGAAGATGT GGAACCAGCC ATACGGGAAA ACTGATTTGG AGAGCGGGGC GCGGCCTCTG
TATCCGATGA TGCTGGAGAG CCCCGAACTG CGCTGGTCCT TCATCAGGAA AGTGTACTCC ATCATCGCCA TCCAGTTGCT
CGTCACCATC GTCATCGGCG CCGTCGTCGT CACCGTCCGC CCCATCGGCG TCTTCTTCGC CACCACCGGC GCCGGATTGG
CTCTCTACAT CGTTCTCATC TTTGTCCCCT TCATCAGTGC GTCTCCTGAC CTAATTGCTT TCAATTCCGT CGCTTGCTGT
TCCTCTGATT TCTGTCTGAC GCCTTTTTTG TGTTGCTTTT GCTTGCAATT GCAGCGTTGT GTCCACTTTA CTACTATTAC
CAGAAGCATC CCGTCAACTA CCTACTCCTT GGGCTTTTCA CTGTATCTCT TTCTTTTGTC GTTGGATTGA GTTGCGCCTT
TACTAGCGGT ACGATTCATA GTCTCGTCTC TCCTCTTTTT TTCTTTTTTT TTAATTTTAT TTTTATTTTC GTTGTTTTTG
ATCTAGATTA TAACATGCGT TTCCGTAGTG CGGGTGGTTT AAATTTGGGA TTTATTTGAC AATTTGCTTA TTTGCTTATT
TTTGGAAGTT ATAACAAAAT GCCTTTACGC GAGGTCTGAA GATATATAGC CTTGTGGATA GAAAATTTTA TTGAAGTTAG
TCAGCTGATT TTCTAGTGGA GATTAGTGAG CAACAACGGA GAATACTTGG AAGTTATAAA ACTTGGTAAC AAATAAGATA
TAATAGTTCA AATTCTCACC TAACTTCGGT TAATTTTTGC ATTTTCTCCG TATCTCCTTT GAATCAAACA CATTTGAGTT
TGGTCTTGCT TGGTTAATAT TTTATATGGG TGACTCGAAT TTGGTACAAT GTACAAAAGT GAATTGCTTT TATAAATTGG
AGTGACTTTA GTACAAGTCC ATCATCGTGG GTCGTGTGCT CAATACCATT GCGTGTGTAC AATCAAACCT ATAATGCCCC
TGTAAAACCT TAATTTCGTC GTCTCATTAG GATTTTGAGT TCTAATCTCT TAAGTTTAAG ACCTTCTTTT TTCTTTCCTT
CCAACCGAGA AAGACATATG GAGTCACAAG AACGGATAAT TCACTTTGTA CGGAAACTAC TCATGTACTA GTATGTCTGC
AAGCCGCTCT TGAGACCCTA TTAGGGATCT TGGTTGTCTC GCGTTAGAAC TTTCTCCCTT CTATATTCTG GCTTTTGCTT
AAGTTGCATT CTCAGTGAAA ATTGCCTATT TGTGTGTAGT CCTGATTTTT TTTCCCCAAT GATGCTGGAT TTTTGATACA
GAGAAAGTTA TTCTGGAAGC TGTAATACTG ACCGCCGTGG TGGTGATTGG TCTGACTCTC TACACATTTT GGGCTGCAAG
GAGAGGCCAA GATTTCAACT TCCTTGGCCC CTTCTTGTTC GGTGCTGTGC TAGTTCTTAT GGTCTTCGCT CTGATTCAGG
TATTTTAATC TTCGAAAATA GTTATTTTAT TTGTATAATG CGATTGAATC GTTTTGGGTT AATCAATGTA TAACATCTTC
TTTCCCTTGC GTTTTAGGTT CTGTTTCCAT TGGGTAAGTT GTCTGTGATG ATCTATGGGT GCTTGGCGGC TCTTATATTT
TGTGGGTACA TCGTATATGA TACAGACAAC CTGATTAAGA GATATTCGTA TGATGAATTC ATTTGGGCTT CGGTCTCTTT
GTATCTGGAC ATCATCAATC TCTTCCTCTC TCTGCTCACT ATTTTTAGAG CCGCTGATAA TTAGATGATT GTATCATATA
CTGCTTCCTA TCTTGCGCAT TGTTTGTTCT CTCTGGGAGA TGAGGGTGGG TTCTGAGAAA ACAAATTCAT ATGATTAATA
AATCTTTAGG GCTCACTCTT TTGCAAGGGG TACAGTGTGT ACAATGGATT ATTGTCAAAG TTGTTCATAA ATAGTTTATT
GACAATGAAA TTTTGCTCTT TGTAACTGTT CCTTTTTGTT ACTTGTGCTA CTTTTTTCCT GTTACAGTTG TCAACAGTCG
ATAGGTGGCC TATGCACCCA TTATGCACGA ATTTATGGAG AAAGTTCAAT AAATTGAACA AATATGGCAA TAAATGTGCA
CATAACCTCG TACCCGCTTT ATTTAATGAG TTTAATAAAT ATCATTCAAT AAGCATATGA TATTTTTTAT TAAACAGTAT
GCATACAAAA GTCATTCACA AAAAGACATC ATTAAGTTTA AATAAGTTAA TTATATGTTT GTGTAATTAA TGTATTTGTT
GGAATAATTA TTAGGCCTAT TAAGTCAAAA GTGGGGAGTA GTGTGTTCAG AAAACTCTTT CAACTATACC TAGGTTTTTG
TCTTACAGTT TTTTATCTTC TTATTGTATT GGTTCTTTAT CATTATAAAT AGAAGAACTT GAGAAGTGTT CTTC

>Vigan.08G232400.01
CTTTCTTTCA CCTATTCAAT TTCCACGCAC GCGCACCACG GTGGTTTTAT TTATTAATAA AACCCGCTTA ATGAACCACA
CTGATCCCAT TTCATTCCAC GCACGCAAGA TCCAAAAAGC CGTAAGCAAT TTTCTCTCTA TATCCCTACA TTTTCTCTCA
GTTTCTCAGT CGCGAGAAGA AAGAAGATGT GGAACCAGCC ATACGGGAAA ACTGATTTGG AGAGCGGGGC GCGGCCTCTG
TATCCGATGA TGCTGGAGAG CCCCGAACTG CGCTGGTCCT TCATCAGGAA AGTGTACTCC ATCATCGCCA TCCAGTTGCT
CGTCACCATC GTCATCGGCG CCGTCGTCGT CACCGTCCGC CCCATCGGCG TCTTCTTCGC CACCACCGGC GCCGGATTGG
CTCTCTACAT CGTTCTCATC TTTGTCCCCT TCATCACGTT GTGTCCACTT TACTACTATT ACCAGAAGCA TCCCGTCAAC
TACCTACTCC TTGGGCTTTT CACTGTATCT CTTTCTTTTG TCGTTGGATT GAGTTGCGCC TTTACTAGCG AGAAAGTTAT
TCTGGAAGCT GTAATACTGA CCGCCGTGGT GGTGATTGGT CTGACTCTCT ACACATTTTG GGCTGCAAGG AGAGGCCAAG
ATTTCAACTT CCTTGGCCCC TTCTTGTTCG GTGCTGTGCT AGTTCTTATG GTCTTCGCTC TGATTCAGGT TCTGTTTCCA
TTGGGTAAGT TGTCTGTGAT GATCTATGGG TGCTTGGCGG CTCTTATATT TTGTGGGTAC ATCGTATATG ATACAGACAA
CCTGATTAAG AGATATTCGT ATGATGAATT CATTTGGGCT TCGGTCTCTT TGTATCTGGA CATCATCAAT CTCTTCCTCT
CTCTGCTCAC TATTTTTAGA GCCGCTGATA ATTAGATGAT TGTATCATAT ACTGCTTCCT ATCTTGCGCA TTGTTTGTTC
TCTCTGGGAG ATGAGGGTGG GTTCTGAGAA AACAAATTCA TATGATTAAT AAATCTTTAG GGCTCACTCT TTTGCAAGGG
GTACAGTGTG TACAATGGAT TATTGTCAAA GTTGTTCATA AATAGTTTAT TGACAATGAA ATTTTGCTCT TTGTAACTGT
TCCTTTTTGT TACTTGTGCT ACTTTTTTCC TGTTACAGTT GTCAACAGTC GATAGGTGGC CTATGCACCC ATTATGCACG
AATTTATGGA GAAAGTTCAA TAAATTGAAC AAATATGGCA ATAAATGTGC ACATAACCTC GTACCCGCTT TATTTAATGA
GTTTAATAAA TATCATTCAA TAAGCATATG ATATTTTTTA TTAAACAGTA TGCATACAAA AGTCATTCAC AAAAAGACAT
CATTAAGTTT AAATAAGTTA ATTATATGTT TGTGTAATTA ATGTATTTGT TGGAATAATT ATTAGGCCTA TTAAGTCAAA
AGTGGGGAGT AGTGTGTTCA GAAAACTCTT TCAACTATAC CTAGGTTTTT GTCTTACAGT TTTTTATCTT CTTATTGTAT
TGGTTCTTTA TCATTATAAA TAGAAGAACT TGAGAAGTGT TCTTC

>Vigan.08G232400.01
ATGTGGAACC AGCCATACGG GAAAACTGAT TTGGAGAGCG GGGCGCGGCC TCTGTATCCG ATGATGCTGG AGAGCCCCGA
ACTGCGCTGG TCCTTCATCA GGAAAGTGTA CTCCATCATC GCCATCCAGT TGCTCGTCAC CATCGTCATC GGCGCCGTCG
TCGTCACCGT CCGCCCCATC GGCGTCTTCT TCGCCACCAC CGGCGCCGGA TTGGCTCTCT ACATCGTTCT CATCTTTGTC
CCCTTCATCA CGTTGTGTCC ACTTTACTAC TATTACCAGA AGCATCCCGT CAACTACCTA CTCCTTGGGC TTTTCACTGT
ATCTCTTTCT TTTGTCGTTG GATTGAGTTG CGCCTTTACT AGCGAGAAAG TTATTCTGGA AGCTGTAATA CTGACCGCCG
TGGTGGTGAT TGGTCTGACT CTCTACACAT TTTGGGCTGC AAGGAGAGGC CAAGATTTCA ACTTCCTTGG CCCCTTCTTG
TTCGGTGCTG TGCTAGTTCT TATGGTCTTC GCTCTGATTC AGGTTCTGTT TCCATTGGGT AAGTTGTCTG TGATGATCTA
TGGGTGCTTG GCGGCTCTTA TATTTTGTGG GTACATCGTA TATGATACAG ACAACCTGAT TAAGAGATAT TCGTATGATG
AATTCATTTG GGCTTCGGTC TCTTTGTATC TGGACATCAT CAATCTCTTC CTCTCTCTGC TCACTATTTT TAGAGCCGCT
GATAATTAG

>Vigan.08G232400.01
MWNQPYGKTD LESGARPLYP MMLESPELRW SFIRKVYSII AIQLLVTIVI GAVVVTVRPI GVFFATTGAG LALYIVLIFV
PFITLCPLYY YYQKHPVNYL LLGLFTVSLS FVVGLSCAFT SEKVILEAVI LTAVVVIGLT LYTFWAARRG QDFNFLGPFL
FGAVLVLMVF ALIQVLFPLG KLSVMIYGCL AALIFCGYIV YDTDNLIKRY SYDEFIWASV SLYLDIINLF LSLLTIFRAA
DN*