GBrowse Details

Vigan.08G168500.01

Basic Information:
Name: Vigan.08G168500.01
Multiple alignment
Variant Information
Position: Chr08:15053450..15057449 (- strand)
Length: 4000
Functional Information:
Description: Similar to Uncharacterized protein. [K7LJM6, Glycine max]
GO: Biological Process: purine nucleobase biosynthetic process (GO:0009113)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: phosphoribosylamine-glycine ligase activity (GO:0004637)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: metal ion binding (GO:0046872)
InterPro: Phosphoribosylglycinamide synthetase (IPR000115)
Rudiment single hybrid motif (IPR011054)
ATP-grasp fold (IPR011761)
ATP-grasp fold, subdomain 1 (IPR013815)
ATP-grasp fold, subdomain 2 (IPR013816)
Pre-ATP-grasp domain (IPR016185)
Phosphoribosylglycinamide synthetase, conserved site (IPR020559)
Phosphoribosylglycinamide synthetase, C-domain (IPR020560)
Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (IPR020561)
Phosphoribosylglycinamide synthetase, N-terminal (IPR020562)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.37,21.81,7.33,2.73,96.43,15.46,15.12,3.06
Arabidopsis thaliana homolog: AT1G09830.1
Structure :
Position: Chr08:15053450..15053859 (- strand)
Length: 410
Type: three_prime_UTR
Position: Chr08:15053860..15054276 (- strand)
Length: 417
Type: CDS
Position: Chr08:15054819..15055349 (- strand)
Length: 531
Type: CDS
Position: Chr08:15055760..15056130 (- strand)
Length: 371
Type: CDS
Position: Chr08:15056822..15057086 (- strand)
Length: 265
Type: CDS
Position: Chr08:15057087..15057449 (- strand)
Length: 363
Type: five_prime_UTR

>Vigan.08G168500.01 class=Sequence position=Chr08:15053450..15057449 (- strand)
AGAGGAGGAT CGTGATTCCT AGGTAAAATT CATTTCATTA CTTTCTAACT ATCAAGTTCA ATATCGGTAA TCTCTAACCT
TGGGTTGTGC CACTGCATAT GTACCTTTAA AACCATTTTC GGTGCATCAA TCCACTTTTT CCTTTATTGT TCCCTCTGGC
TTTGCCTACA CTTCATCTTT ATTCTCCAAG TACGCAACCT GTTTGATAAA TTAACTCAAT GGGTTTTATT TCAGTTTAAG
GGACTGCTTT TTAAGTTTTA AATATATATA TTTTCTTTCC TCTTTCTTTT TGCCGTCTCT TGGAAAGATT ACACTTTTAT
ACCGTTTTCA CTAAAGCTGG ATAACTTTGT AACAGGGAGT AGAATGTCTT GCGCCACCTT CAATGTTGCA TTTTCTTTGA
ATCTTCATGG ATGCAATAAG AATGCAGTTT CTAAGTCACT TGGTTTCAGA CACCACACAA CTTTCCACAA GTTTTCTTCT
CTCTTTTTCG AGACCTTGGA TTTGAGCCCC ACTAATCGTA GTTTTGTCCA GCATGCACCC TCACGCTCAT TCCATAGTGT
TTTCAAATGT GCTGCTCAGA ATTCCCAACC ATCGCCTTCA GTTGGCATTG ACACAGAGAA CAATTCTCGT AAGCACTGCC
GTTATTCTAT CTACACATTC CTGTCTTTGT ATTGCGATAT TATATATTTT CATTATGGTT TTTAGGGACT TTGTCCTTCC
CTAATACCGT CATTGTTCAA TGGTCACATT AACGTAACCT GTAGTTTTCT CTATGGTTCT GAAAATCATC GAAGAGACTC
TGTATTATGA AGTAAATTTC AAAGTTGTCG AGGTTGGCCC TTTCTTGGTT AATACCGATT GAAATTCTCA TTAACATCCA
AGTATAGGTT ATTCTAGCAT ACGTTTACCA CATTTAAAGT CTTGAATTCA CAATTGTTTT CTCCAGTGAG GTGTAAGCAC
TTGGTATATT AATGTAATAA AGGTTTCCGG TAATTGGTAA ACTGCTGCCT GACAATAGGA ACTAATGTCT TTATTGAACA
GGTCAATGAG GGATAATTTT CCATTGTGAC TTTTGTTTTT CACTTTTTGA CATGATGGGA TTTCCAATGA TATTAATGCT
GTGAACATAA TATAATGTGT ACAACCGCAT GCATGTGGCT TATAGTTTCT TGACAATTGC AACTGATTTA ATCTTTTGTT
TCTGTTAAAG TTTCAGAGTC AAGAAGATTC AGTGTCTTAT ATATCAGTCT TTATTCACTT TATTATATTT ACTGATATTT
TTCTGCTTAC TTTCAAATTT CCTTGTGCCT CCTTCAAAGA AAGAGTGACT GTTCTGGTTA TTGGTGGAGG AGGACGTGAA
CACGCACTTT GCTATGCCTT GCAACGATCA CCATCCTGTG ATACAGTACT TTGTGCCCCA GGCAATGCTG GGATTGCTAG
CTCAGGAAAT GCTACTTGCA TCTCAGACCT TGATATTTCT GATGGAGCAT CAGTGATCTC ATTTTGCCAG AAAAGGGGAG
TGGGACTTGT TGTTGTGGGA CCTGAGGCTC CACTTGTTGC AGGTCTTACG AATAAGTTAG TTAAAGCGGG AATCCCAACT
TTTGGTCCAT CTGCTGAGGC TGCTGCTTTG GAAGGTTCTA AGAATTTCAT GAAGAATTTG TGTGACAAGT ACGATATTCC
AACAGCCAAG GTCATCTCTC TTATTTTGAA TCTCATCAAC CAGATAAATA ATTATTCCTA GTTCTGCTGG AATGATATTT
GTGCATGCTT CCGTGTATTG TATCTTATTA GGAGCTTCTT CGTATATTCT GTAACATACT AATTATAATT AGTAAGCAGA
TTAGTCAAAA CTATATCGTG TTGGTTTCTG GATATGAATT TTTGATAACC TGTCAGGGTT TCCTTGATAT TAAATATGAA
TGTTGCCCAT TTGGCTCTTA ATTGTTCTAT TAATCAAGTC AGAATATATT AAGAAGTCGT TTTTATGATA TTAGTGAAGT
CATCATGTGC GTGCCTCCAT TTTCCATTGA CCCTATTTAT GTCAATTTCA CTCTGAAGAA TTTTTTGTTA GTTTTTATTA
ATTGGGGTTT ACTAGTGCAG TATAAAACAT TTACCGATCC ATCTGCTGCA AAGCAATATA TTCAAGAACA AGGAGCCCCA
ATTGTTATAA AAGCAGATGG ACTGGCTGCT GGGAAAGGAG TTACTGTTGC CATGGCATTG GAAGAGGCAT ATAAAGCTGT
TGATTCAATG CTGGTGCAGG GTGATTTTGG TTCTGCAGGT TGTCGTGTCA TTGTTGAAGA ATTTCTAGAA GGAGAGGAAG
CATCTTTTTT TGCATTGGTT GATGGAGAAA ATGCAATTCC ACTAGAATCT GCTCAGGATC ATAAGCGAGT TGGTGATGGT
GACACAGGGC CAAATACTGG TGGTATGGGT GCATATTCCC CAGCTCCTAT ATTAACCAAG GAACTTCAAT CTATTGTAAT
GGATTCTATT ATCATCCCAA CAGTAAAAGG AATGTCGGCT GAAGGTTCCA AGTTTGTTGG GGTTTTGTAT GCTGGGCTTA
TGATTGAGAA GAAGTCTGGC ATGCCTAAGT TAATTGAGTA TAATGTGCGA TTTGGTGATC CAGAGTGCCA GGTCAGTTAA
GTATAAGATG CTTACTAGAA TGAATTTACT TTCTGATGTG AGTAGTTATA CCTTGAAATA CAATAGTCTT GAAATCAGAA
GACATTACTG AAAATGAATG CTTGAGGAAT TGAGCTCATG TCATGGTTAG ATATATGCAG ATTTTAATTC AAAAGACTTG
CATTTTTTCT TTATAATCCT TCTATCGAAA TTTTAGTTTG AAAAATGTGT CAAGGGATTG TGATGTCTAA ATATCTTTCT
ATGATTGTCC GAGTTTTGGG AGGTCATTAT ATTTGCTTAC AAATTGCAAA TTGGAAATTT GGTGGCCTAC CCTTTCAAAG
CTTTTTTAGT CATCTTTCTA GTTCATTGAT ATCATAGATC TTATTTAACG CAAGCACATG CCCACACGCA CAATCATCAG
TTTATTTTCA CAATACAAAG TGTACAACCT ATGTTAACAA CATATAATCA CATTTGCACT GTTATATGTT AATAACATGG
AAGCTATGCT AACGGATAGT GTGCATAATT TTTCCTTCTG AAATTTTGAA CAGGTCTTAA TGGTACGGTT GGAGTCTGAT
TTGGTACAAG TTCTGCTCGC AGCATGCAGA GGAGAGTTGA ATGGGGTATC ACTGAAGTGG TCTCCTGGGT CTGCCATGGT
TGTGGTAATG GCAAGTAACG GATATCCTGG ATCATACCAG AAGGGAACAG TGATTGAAAA CCTTGAAGAA GCTGAGGCTG
TTGCTCCAGG TATCAAGATA TTTCATGCAG GAACCGCATT TGACTCTGAA GGAAGGTTTA TTGCAACTGG GGGACGTGTT
CTTGGGGTCA CTGCCAAGGG TAATGATCTT GAAGAGGCAT GTGATCGAGC TTATCGAGCT GTTGAGAATG TTAATTGGCC
TGGAGGCTTC TACCGTCGGG ATATTGGCTG GAGAGCCCTA CCTCAGAAAC AGCATGCTAG AAAAGAATAA ATTACTGAGA
CTGAGAACAT TAGACATTGG CCAACGCTCA ATACTGGTAA ATCGGTTTAC AAGCATTATG TAAGAGGGGC TCTCTACAGT
AGATGAATCT TGTAACTTTT ACTTTTCAGG TGTAACAACA TCATTAGCCA TGGTGGGGAA CCTCGTGAGA ACATATTCCT
CCGCCCCCAT CTCTTAAACT TGGTTTCAAT AAAAGAAGTT AACTTAAATA CTAAAATGTA TACTGAAATG GGTGAAAATA
AATCCTTCTT CAAGACATTT TTAAGGTTCA AACATGAATG CTGAGCTAAA ACTTGTTTAA TATCATCCTT TCAGTTTATT
TCCGTTGATT CTTTATTTGA GGGGTTCCTT AGTTCATATT TAAAAAAGTA GCGACTGATG TCGACGCCTG TCAATGTCCC

>Vigan.08G168500.01
AGAGGAGGAT CGTGATTCCT AGGTAAAATT CATTTCATTA CTTTCTAACT ATCAAGTTCA ATATCGGTAA TCTCTAACCT
TGGGTTGTGC CACTGCATAT GTACCTTTAA AACCATTTTC GGTGCATCAA TCCACTTTTT CCTTTATTGT TCCCTCTGGC
TTTGCCTACA CTTCATCTTT ATTCTCCAAG TACGCAACCT GTTTGATAAA TTAACTCAAT GGGTTTTATT TCAGTTTAAG
GGACTGCTTT TTAAGTTTTA AATATATATA TTTTCTTTCC TCTTTCTTTT TGCCGTCTCT TGGAAAGATT ACACTTTTAT
ACCGTTTTCA CTAAAGCTGG ATAACTTTGT AACAGGGAGT AGAATGTCTT GCGCCACCTT CAATGTTGCA TTTTCTTTGA
ATCTTCATGG ATGCAATAAG AATGCAGTTT CTAAGTCACT TGGTTTCAGA CACCACACAA CTTTCCACAA GTTTTCTTCT
CTCTTTTTCG AGACCTTGGA TTTGAGCCCC ACTAATCGTA GTTTTGTCCA GCATGCACCC TCACGCTCAT TCCATAGTGT
TTTCAAATGT GCTGCTCAGA ATTCCCAACC ATCGCCTTCA GTTGGCATTG ACACAGAGAA CAATTCTCAA AGAGTGACTG
TTCTGGTTAT TGGTGGAGGA GGACGTGAAC ACGCACTTTG CTATGCCTTG CAACGATCAC CATCCTGTGA TACAGTACTT
TGTGCCCCAG GCAATGCTGG GATTGCTAGC TCAGGAAATG CTACTTGCAT CTCAGACCTT GATATTTCTG ATGGAGCATC
AGTGATCTCA TTTTGCCAGA AAAGGGGAGT GGGACTTGTT GTTGTGGGAC CTGAGGCTCC ACTTGTTGCA GGTCTTACGA
ATAAGTTAGT TAAAGCGGGA ATCCCAACTT TTGGTCCATC TGCTGAGGCT GCTGCTTTGG AAGGTTCTAA GAATTTCATG
AAGAATTTGT GTGACAAGTA CGATATTCCA ACAGCCAAGT ATAAAACATT TACCGATCCA TCTGCTGCAA AGCAATATAT
TCAAGAACAA GGAGCCCCAA TTGTTATAAA AGCAGATGGA CTGGCTGCTG GGAAAGGAGT TACTGTTGCC ATGGCATTGG
AAGAGGCATA TAAAGCTGTT GATTCAATGC TGGTGCAGGG TGATTTTGGT TCTGCAGGTT GTCGTGTCAT TGTTGAAGAA
TTTCTAGAAG GAGAGGAAGC ATCTTTTTTT GCATTGGTTG ATGGAGAAAA TGCAATTCCA CTAGAATCTG CTCAGGATCA
TAAGCGAGTT GGTGATGGTG ACACAGGGCC AAATACTGGT GGTATGGGTG CATATTCCCC AGCTCCTATA TTAACCAAGG
AACTTCAATC TATTGTAATG GATTCTATTA TCATCCCAAC AGTAAAAGGA ATGTCGGCTG AAGGTTCCAA GTTTGTTGGG
GTTTTGTATG CTGGGCTTAT GATTGAGAAG AAGTCTGGCA TGCCTAAGTT AATTGAGTAT AATGTGCGAT TTGGTGATCC
AGAGTGCCAG GTCTTAATGG TACGGTTGGA GTCTGATTTG GTACAAGTTC TGCTCGCAGC ATGCAGAGGA GAGTTGAATG
GGGTATCACT GAAGTGGTCT CCTGGGTCTG CCATGGTTGT GGTAATGGCA AGTAACGGAT ATCCTGGATC ATACCAGAAG
GGAACAGTGA TTGAAAACCT TGAAGAAGCT GAGGCTGTTG CTCCAGGTAT CAAGATATTT CATGCAGGAA CCGCATTTGA
CTCTGAAGGA AGGTTTATTG CAACTGGGGG ACGTGTTCTT GGGGTCACTG CCAAGGGTAA TGATCTTGAA GAGGCATGTG
ATCGAGCTTA TCGAGCTGTT GAGAATGTTA ATTGGCCTGG AGGCTTCTAC CGTCGGGATA TTGGCTGGAG AGCCCTACCT
CAGAAACAGC ATGCTAGAAA AGAATAAATT ACTGAGACTG AGAACATTAG ACATTGGCCA ACGCTCAATA CTGGTAAATC
GGTTTACAAG CATTATGTAA GAGGGGCTCT CTACAGTAGA TGAATCTTGT AACTTTTACT TTTCAGGTGT AACAACATCA
TTAGCCATGG TGGGGAACCT CGTGAGAACA TATTCCTCCG CCCCCATCTC TTAAACTTGG TTTCAATAAA AGAAGTTAAC
TTAAATACTA AAATGTATAC TGAAATGGGT GAAAATAAAT CCTTCTTCAA GACATTTTTA AGGTTCAAAC ATGAATGCTG
AGCTAAAACT TGTTTAATAT CATCCTTTCA GTTTATTTCC GTTGATTCTT TATTTGAGGG GTTCCTTAGT TCATATTTAA
AAAAGTAGCG ACTGATGTCG ACGCCTGTCA ATGTCCC

>Vigan.08G168500.01
ATGTCTTGCG CCACCTTCAA TGTTGCATTT TCTTTGAATC TTCATGGATG CAATAAGAAT GCAGTTTCTA AGTCACTTGG
TTTCAGACAC CACACAACTT TCCACAAGTT TTCTTCTCTC TTTTTCGAGA CCTTGGATTT GAGCCCCACT AATCGTAGTT
TTGTCCAGCA TGCACCCTCA CGCTCATTCC ATAGTGTTTT CAAATGTGCT GCTCAGAATT CCCAACCATC GCCTTCAGTT
GGCATTGACA CAGAGAACAA TTCTCAAAGA GTGACTGTTC TGGTTATTGG TGGAGGAGGA CGTGAACACG CACTTTGCTA
TGCCTTGCAA CGATCACCAT CCTGTGATAC AGTACTTTGT GCCCCAGGCA ATGCTGGGAT TGCTAGCTCA GGAAATGCTA
CTTGCATCTC AGACCTTGAT ATTTCTGATG GAGCATCAGT GATCTCATTT TGCCAGAAAA GGGGAGTGGG ACTTGTTGTT
GTGGGACCTG AGGCTCCACT TGTTGCAGGT CTTACGAATA AGTTAGTTAA AGCGGGAATC CCAACTTTTG GTCCATCTGC
TGAGGCTGCT GCTTTGGAAG GTTCTAAGAA TTTCATGAAG AATTTGTGTG ACAAGTACGA TATTCCAACA GCCAAGTATA
AAACATTTAC CGATCCATCT GCTGCAAAGC AATATATTCA AGAACAAGGA GCCCCAATTG TTATAAAAGC AGATGGACTG
GCTGCTGGGA AAGGAGTTAC TGTTGCCATG GCATTGGAAG AGGCATATAA AGCTGTTGAT TCAATGCTGG TGCAGGGTGA
TTTTGGTTCT GCAGGTTGTC GTGTCATTGT TGAAGAATTT CTAGAAGGAG AGGAAGCATC TTTTTTTGCA TTGGTTGATG
GAGAAAATGC AATTCCACTA GAATCTGCTC AGGATCATAA GCGAGTTGGT GATGGTGACA CAGGGCCAAA TACTGGTGGT
ATGGGTGCAT ATTCCCCAGC TCCTATATTA ACCAAGGAAC TTCAATCTAT TGTAATGGAT TCTATTATCA TCCCAACAGT
AAAAGGAATG TCGGCTGAAG GTTCCAAGTT TGTTGGGGTT TTGTATGCTG GGCTTATGAT TGAGAAGAAG TCTGGCATGC
CTAAGTTAAT TGAGTATAAT GTGCGATTTG GTGATCCAGA GTGCCAGGTC TTAATGGTAC GGTTGGAGTC TGATTTGGTA
CAAGTTCTGC TCGCAGCATG CAGAGGAGAG TTGAATGGGG TATCACTGAA GTGGTCTCCT GGGTCTGCCA TGGTTGTGGT
AATGGCAAGT AACGGATATC CTGGATCATA CCAGAAGGGA ACAGTGATTG AAAACCTTGA AGAAGCTGAG GCTGTTGCTC
CAGGTATCAA GATATTTCAT GCAGGAACCG CATTTGACTC TGAAGGAAGG TTTATTGCAA CTGGGGGACG TGTTCTTGGG
GTCACTGCCA AGGGTAATGA TCTTGAAGAG GCATGTGATC GAGCTTATCG AGCTGTTGAG AATGTTAATT GGCCTGGAGG
CTTCTACCGT CGGGATATTG GCTGGAGAGC CCTACCTCAG AAACAGCATG CTAGAAAAGA ATAA

>Vigan.08G168500.01
MSCATFNVAF SLNLHGCNKN AVSKSLGFRH HTTFHKFSSL FFETLDLSPT NRSFVQHAPS RSFHSVFKCA AQNSQPSPSV
GIDTENNSQR VTVLVIGGGG REHALCYALQ RSPSCDTVLC APGNAGIASS GNATCISDLD ISDGASVISF CQKRGVGLVV
VGPEAPLVAG LTNKLVKAGI PTFGPSAEAA ALEGSKNFMK NLCDKYDIPT AKYKTFTDPS AAKQYIQEQG APIVIKADGL
AAGKGVTVAM ALEEAYKAVD SMLVQGDFGS AGCRVIVEEF LEGEEASFFA LVDGENAIPL ESAQDHKRVG DGDTGPNTGG
MGAYSPAPIL TKELQSIVMD SIIIPTVKGM SAEGSKFVGV LYAGLMIEKK SGMPKLIEYN VRFGDPECQV LMVRLESDLV
QVLLAACRGE LNGVSLKWSP GSAMVVVMAS NGYPGSYQKG TVIENLEEAE AVAPGIKIFH AGTAFDSEGR FIATGGRVLG
VTAKGNDLEE ACDRAYRAVE NVNWPGGFYR RDIGWRALPQ KQHARKE*