GBrowse Details

Vigan.08G162300.01

Basic Information:
Name: Vigan.08G162300.01
Multiple alignment
Variant Information
Position: Chr08:14509785..14516293 (- strand)
Length: 6509
Functional Information:
Description: Similar to Uncharacterized protein. [B2DBE7, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: Basic-leucine zipper domain (IPR004827)
Basic leucine-zipper, C-terminal (IPR020983)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:11.73,20.01,10.97,11.26,11.37,13.35,16.74,11.51
Arabidopsis thaliana homolog: AT5G28770.2
Automatic updates:
Name: NM_001251024 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bZIP protein (SBZ1), mRNA.
PubMed ID: 18365246 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:14509785..14509956 (- strand)
Length: 172
Type: three_prime_UTR
Position: Chr08:14509957..14510352 (- strand)
Length: 396
Type: CDS
Position: Chr08:14510576..14510701 (- strand)
Length: 126
Type: CDS
Position: Chr08:14510825..14510900 (- strand)
Length: 76
Type: CDS
Position: Chr08:14513351..14513567 (- strand)
Length: 217
Type: CDS
Position: Chr08:14513863..14513959 (- strand)
Length: 97
Type: CDS
Position: Chr08:14515709..14516083 (- strand)
Length: 375
Type: CDS
Position: Chr08:14516084..14516293 (- strand)
Length: 210
Type: five_prime_UTR

>Vigan.08G162300.01 class=Sequence position=Chr08:14509785..14516293 (- strand)
GGATGGGTTA TATAATATCA GTGGTTGATG ATAGGAGAGA AAAAAAATTG AAAAAGAAAA GAAAGAGAAA GATTGAATGT
CTTCCCCCAG TGGTGTACGA TTTTGACCTA TATGCCCCGG TGCTCTCGAT TTGTATAGCC GCGGCCTCCT CCCATCGCAT
CACATCACAC ACAATCAAAC CAAAGGAGAC GTAAAGACGT AAGATACGAT ATGGATAGGG TGTTCTCCTC AGTCGACGAA
ATCTCCGATC ACTTCTGGCC ATCGCCGCCG ATCCCCGTCT CCGCCGCCGA TGAGGCCTCT AAGATGAGCC GTAGCGCCTC
CGAGTGGGCC TTCCAACGCT TCATCCAGGA AGCTTCCGCA CCCTCTCCCC CCTCTCCTTC CTCCGCCACC ACGGCTACTT
CTGCGGCCGC CACTGACGTT GTCTTTGTCG AGATCGACGA TCATCCCAAA CCTGCCCCTG CTCCTCCCCA GAACGCCGCC
GTTTTGCCCA ATGCCCCTGT TCCCGTACCC CTTGACTCCG ATGAGTACCA GGCCTTCCTC AAGAGCAAGC TCAACCTTGC
ATGCGCTGCT GTTGCCATGA CTAGGGTAAT CCTTTTCTTC TTCACCTTTC TTCATCGTTC AATGTGTGCT CCGTTTCGCA
TGTGCGAATC AAACGATTCC ATTGGTTCTG ATTTGGATCT GTCTTGCGTT TTAACTTTTT TTCGTCTTTC AGTCAATTAT
CTTGCATGCA TTTTTTTGTT TATTTATTTG CACACTGGGG TCTGCTTATA TATTTAGGAG CAAACGGCGA TCATCTCTTG
TTTTTAAATT AAGAAACGTC GAATCACACC ACACTTCAGA GTTGTTCTTA AAGTGAATTT GCCATTTCAA TTCTGAATGC
AAAAATCTGA ATATGATACG TAACATATTC AGGTGCAACT ATTCTGTTAC AAGGGAATCC CCCAATTTGA TTCATTTCTG
CAGTTTGCCT TCTCTCATAA GTGGTCCTTT AAGTAGAACA AATCACTTAA TAGTGTATAA AATATTAAAA ATCCATTAAA
TTCGACTTTG CGATTAAACT GGTGATTCAA TATTTAAGTA TTACTTAAAG GGATTTTGAT AATGTAAACC CATTTGTAGT
TTAGACGGAG TGCATTGCCA AATTATAACT ATTATTAATC CCGAAATACT TCTTGGCGTA GCTTCATAAC ACACTCCTTC
TAATGAAACA TACTTCTCCT TATAAACCAA GTTGGAGGAT ACTAGCAATT GCTCGTAGGA TTTGCTAAAA TAGACGACCC
ACTTATTAGT TAGGATGACG TAAGAAAATT ATAACTACGA TCAATTTTAA AGAACATCTG GATGCATCTT GTTAACATAC
TCCTTCTAAA AGACAAGTGG GTTTATGTTA GTAAATCTCT TCCATAATTT TAATTTTAGT TATCCGAGAC TTACTATTTA
CTTTTCTAGT TTGTATAATT TCTTATCACT GAGACGAATC AACAATTCAT TGTGTGGGTG TGGGCGGGCG GGCGGGCGCG
CTTGTGTATA TTTTTACCTT TTCACCATTT CTTGTGAAAA AAAAATTAAA ACCTCATTTG AGCTTAAATT TTCAATTAAA
AGAAATTGAA AGAATACTTG TGAAATTTTC CTATATGATT ATTCCACTAC TTTATTAATC ACTCATCAAT TCAATGCTCT
TGCTCTATTT AGCCATGTAA TTGCTTCATT TCCATTCTTC TAAAATAAGG ATTGCACAAA CTCATATATA ACTAATACTT
TTTGTCTTAT ATGACTTTTA CTTAAGTTGT TTTATCTATT TCTAGCTTAA ATTGTTTGCA TTGAACACCG TGTATTGTCT
ATATGAGATT TGTTCCACTT CCTTCCCTCG TATTCATCTT GCTTTAGTTG CTTTCTGGAA GCAGTTTTGA AGTATTTTTC
TCTAAATCTT ACGATTACAA ATTATGACTT ACATATGAAA TAATCAATCA GAAATTCAGA ATCCAAATCT TGATTGGATA
GCCTTGGTTT ATAACATTAA GAACTATTTA GGAGACAGAA TAATAGTTTG AATACGAAAT TAGAGGTTTA TTACCTGTTT
ATGCAATTCA GAGTAATACA GATATATTAC CTGTTTCTGT ACTTCCTGGG GTACACACCA GTATTAACTA GCCCTTCGAA
ATTCAGTTCA AAAGCATGTG TTTTCAACAA ATAGCTATAC AAAATTAGGA GGAAGTATCC AAATAGAAGG TCTCCAATGC
ATTCCATGAA GGACTTTCTA TTTGTATCTA TTCTCAGCTT TCCCCACTGA GAATTGAACC AGTATCTAAT TTTTTTCTCT
ACTGTCCACA ATAGGCATCT TTGGCTAAAT CTCAAGAGCC AGCCCCTTTT TCTGATGGTG GATCACAGCC TATCGATCCT
TCTCAAGTTG GATCTCAGAC TACATCTAAA GGTTTGAATT GGTAAATATT TATGCATACA TGTATTAAAA GGGTTAAATG
ACAATACATG GTCAGTGAAG TAGAGTTTGT GGAATGCTGA ATATGTAATG AATAAGTATC TAGTTGCAGT TGCACGAGTG
GGTTAATTGC ATAATCTGTA TTTACCATTT TATTTTGATC AGAACACTAT TGCCTTCTTT CATTGACCTG TTTAGTAATT
TTTTGAGCAG CTTTACAGGT TCAATTTTAT CTCTCTTTGT ATGGATAACA CCTATTGAAT TATGTCAAAC ATATATGTCT
ATGTAGGATC TATTCCTTCT GGAAATGATC CATCTAAGTT ACAAGATAAA GATACGAAAG TACCAGTTGG GATGCCTTCC
ATACCTTCCA CGCAAAAGAA ACCTGTTGTT GCAGTTAGAC CATCAACAAG TGGATCATCA AGAGAACTGT CAGATGATGA
TGATGCTGAG GGAGAGACAT CTATGAACGA CATGGACCCA GCTGATGCAA AAAGAGTAAG GAGGTAACGA TATTCTAAAA
ATTGCATGTT TTTATTGTAT AAAATGCTGG TACTTCTTTT ATACGCAGGA ATTAAATGTA ATATCATGTG ATTGTGCTCA
CAGAACGCTC ATTAGTGTTG CATGATTTGC AATACAGTAA GTGCGATTCC ATATGATTCA AGCATCTGGT GATACAATCA
GTGAGCAAAT CATTTTCATA TTTGAATCAC ATCATGATTC ATACCTGAAT CGCAGTAATT GCGATCTGGA GAAGTGTAAC
ACTTGTCATA CGTAAGTTCT GTTAGGCCTC AGAAGGAGTT GTTACATTCA ACTACTTTTC TGAGGCTGTC ACCCCTGGTA
TGAGCGGCAT TTTCTGCTGC TAAAATAAAA AAAAAAAAAG AAGGAAAAAA CAGCAGCCAG AGCGCTGGGT GGACAAATCA
TGTGCTGCAG TTCTAACTTG TGTTGCATAT GCCGTGCGTG GATTCCCAAT TACTGGTTGT TATCTTTTTA TCTTAAAGTC
TAGGCTTATT TACTTATTTA GTTCCGCTTT TGTTTTTTCA AAATTTTGTT ACCCAATTGT TGAAAGCCTC AATTTGGTCT
CAGTTTTTTA CAAAATAGGT CACTGTTTGC CATTCTGTTA ATCTGATGGA AACAGTGTTT AAGCAATGCG AACATGATGT
TATTATTGTT GATGTGTCCG TTAAGGATTA ATGAGCTCTC TAAAAACTGT TGGTATTCAT GGGATTCGGT GGAGGTGCTC
TTCTTCATTT GGCTTAGGGT TGCCGGGGTA TTTGGTTTAT GAGGGCATCT CTTTTGCAGC GTCATAAGTT TAAAATGTGT
CTTATAAGAT CTTCGTATTA GAGTATGCTG TCATGATATA AAATTTAAGA CTCGTGATTA TAAAAATAAA AGAAATATTC
TTCTGCCTTA AAAATTATTG AAATGCAGGT TTTATGAAAA CCCTTGTATC GGAAATTTTG AAAGTGATGT GACAGTGAGA
TTCATAAAAG TAAATTAAGA CTTCCTTCAT TGACTTTTGC AATGGAGATG ACTTGAGAAG AATGTTCCTT TCCTCTTTAG
GGTAATTGGT TGCTTATCTC TTTCTTAGTC TCTTTTTCTA TCTTTTACGT CCGTTTCTTT TTCTTAATTC ACAAAACCCT
TTTTCTGCTC TCTATGCTAT TCCGGCATGT TTGATTTATT ATTTCCCAAT TCAAAGATTT TTGTGCTCAT TGATATTGTG
TGATTTTTAT TTTGGGGTTT CCTTTTTTAG GGTGAATTAC GGGTGTTGAG AATTTTATGG GATTTTGAAT CTGTGTTTGA
TTGAGTTCAT TGGTGGATTG ATTGATTTTG GTGTTTTGGA TAGATTTTGT GGTTTTCAAT GATGGGTTTT TTGTGGATTT
TACTTGAATT GAGTTCATTT ATGTGTTGTT TGGAGCACAT GGCTGTCGAA ATGTAATGGG AACTGTGCCG CTTACTTCCC
AATTGTTGAT TGTGAACTGT AACCCATGTT TTAAGGTCAC CTCCATTGTT AGAGTCATTA CAAGGTTTTA ATTTACTTTT
TGTGGGAAAA ATGATTTTAT GTTCTTATGA CCCAGGGTCT TCTTTAAGAC CTACAGTCTC AAGTTTTGTT ATATTAGCTT
TCAGCAATAG AGATGTTCTT AATTTAAAGT TGCAATGGGC TTTCTTGCAC ATGCAGACCA CGGGCTTTTA AAAATTTCCG
ATTTCAATAT TTAAATATTA AATTAACTTA TTTTAACTGC AATATCCACC TTAAAGAGAT CATAATGTAT TCTTCCGTCA
GGCATATAGA CGGTGTTAAT GAAGGGAAAA AATTAGCGAA TTTCATTAAG GTGGACCAAT TGAAACTTTT AATAACTATA
GGACGAAATT GAAAAAATGA ATAAATTGTG TGACACAATA AGTTATTAAA CCCAAAATAA TCTATTATAA AGCCGTAGTA
AAATACTTGC TCCATTCTGA TTTGTAAGCA AAACAAGGAA CACTTTTTTG TTACAACTAT AATTTGAATT CTGATTCAAC
TACCTTGGTT CAGAGTGGTT AGGTGTTTTG TTTACTCATA GGATTTGCCA GCTCCTGCCT TGTAAACTAA GTGATTGGCG
GCATGCCAGA AAAAGTATTA CGTTAAACAA GAGTGATGCT GTTTACTCCA TTTTTTTCCC TACAAATTGT AATAATCTGT
GAAAAAAAAT GCCTGAACAT TTTTCCTATG AAACTTCAGA TGTGAAGATG TGGAACCCTG GAGGTTGTTA CATTGTTCTT
AAACGGATTA TGTACTTCCT CGTTTATACG GTAGGATTGA ACAAATTTCA TATTGGTTGC AAGTCTTACT GAACAGCCTT
TTTTTTCAAA GATAGGATTC CAGTTTTACC CTCTTTTTAG TGTTAGATAT TGATTTGTTC TACTAGGGAA CAAATTCTAT
TTCGGTCATT GTCTAATAAC ATTTATATCT CAGGATGCTA TCCAATAGGG AGTCTGCCCG GCGCTCTAGA AGAAGAAAGC
AGGCTCATTT AACTGACCTA GAAACACAGG TTTGTGTATT TTATTTTATT TTATAGAATT GAATTGTTTC TCCTCCGCCC
TCATGTGTGT TAGATGATTA GTCCTCACAT GAAAACATAG GTGCTTTATG ACATTTTATT CTATCATCAT AGGTTTCTCA
ATTAAGAGGT GAAAATTCTA CCTTGTTGAA GCGCCTTACT GATGTAAGTC AGAAATACAG TGAATCTGCT GTTGACAACA
GAGTTTTAAA AGCTGATGTG GAAACATTAA GAGCAAAGGT AATGGTCCTA CTTTATACTT GGCCTAACTT AAATCTATTA
GGCGCAAACC TACAGGCTCT TTCTCAAATT CCATCGGTTG GATGAAGAAT GGTGTCCGAT CATATTTTTT CACAGTGAAG
AGAATCTACA TTAAAAGTTA CATTGCCAAT TGCTTCACCT GGATTGACAA AAAGATCTGA TATGTTTTTG TTATTGCCTG
CCTTGTTGTT TTCATTTGTA GGTGAAGATG GCTGAAGAGA CCGTCAAAAG AATTACCGGG TTGAATCCAA TGGTTCATGC
CATGTCTGAC ATGTCACCAT TGGGCATGAC GTTATTTGAT GGAAGAAGCC CTTCAGACAC TTCAGCAGAT GCAGCTGTTC
CTGTGCAAGA TGATCATCAT CACTTCTATC AACCCACATC TAATAATCCT ATTCCCAGTC ATGATCCGAT AGTCAACGAT
GGGTTGGCGG GCATGTCTTC AATTGAAAAT GTGCAGCAGA ACCCTGCAGC AGTGGCAGGT GGGAACAAGA TGGGTCAAAC
TTCTTCCCTG CAGCGGGTAG CTAGCTTGGA ACATCTTCAG AAGCGGATTC GTGGTGGTGT GGATTCCTGT GGACCTCCCT
CTAATGGGGA GCAGTAAGTA GCCAAATCTC TTGGATGCTT CACCAGAAAG TTATTATCAA ACAGTTATTT CTGCTAGTTA
TTTATAACTA AAGCCATATT CATCTGGAAT ACACTGTACA TCAATTTGAT GGATCACATG AGTCTGGATT CAATTAGTGC
ACTTCGCCTC TTGTTCTTTT CCAAAAAAA

>Vigan.08G162300.01
GGATGGGTTA TATAATATCA GTGGTTGATG ATAGGAGAGA AAAAAAATTG AAAAAGAAAA GAAAGAGAAA GATTGAATGT
CTTCCCCCAG TGGTGTACGA TTTTGACCTA TATGCCCCGG TGCTCTCGAT TTGTATAGCC GCGGCCTCCT CCCATCGCAT
CACATCACAC ACAATCAAAC CAAAGGAGAC GTAAAGACGT AAGATACGAT ATGGATAGGG TGTTCTCCTC AGTCGACGAA
ATCTCCGATC ACTTCTGGCC ATCGCCGCCG ATCCCCGTCT CCGCCGCCGA TGAGGCCTCT AAGATGAGCC GTAGCGCCTC
CGAGTGGGCC TTCCAACGCT TCATCCAGGA AGCTTCCGCA CCCTCTCCCC CCTCTCCTTC CTCCGCCACC ACGGCTACTT
CTGCGGCCGC CACTGACGTT GTCTTTGTCG AGATCGACGA TCATCCCAAA CCTGCCCCTG CTCCTCCCCA GAACGCCGCC
GTTTTGCCCA ATGCCCCTGT TCCCGTACCC CTTGACTCCG ATGAGTACCA GGCCTTCCTC AAGAGCAAGC TCAACCTTGC
ATGCGCTGCT GTTGCCATGA CTAGGGCATC TTTGGCTAAA TCTCAAGAGC CAGCCCCTTT TTCTGATGGT GGATCACAGC
CTATCGATCC TTCTCAAGTT GGATCTCAGA CTACATCTAA AGGATCTATT CCTTCTGGAA ATGATCCATC TAAGTTACAA
GATAAAGATA CGAAAGTACC AGTTGGGATG CCTTCCATAC CTTCCACGCA AAAGAAACCT GTTGTTGCAG TTAGACCATC
AACAAGTGGA TCATCAAGAG AACTGTCAGA TGATGATGAT GCTGAGGGAG AGACATCTAT GAACGACATG GACCCAGCTG
ATGCAAAAAG AGTAAGGAGG ATGCTATCCA ATAGGGAGTC TGCCCGGCGC TCTAGAAGAA GAAAGCAGGC TCATTTAACT
GACCTAGAAA CACAGGTTTC TCAATTAAGA GGTGAAAATT CTACCTTGTT GAAGCGCCTT ACTGATGTAA GTCAGAAATA
CAGTGAATCT GCTGTTGACA ACAGAGTTTT AAAAGCTGAT GTGGAAACAT TAAGAGCAAA GGTGAAGATG GCTGAAGAGA
CCGTCAAAAG AATTACCGGG TTGAATCCAA TGGTTCATGC CATGTCTGAC ATGTCACCAT TGGGCATGAC GTTATTTGAT
GGAAGAAGCC CTTCAGACAC TTCAGCAGAT GCAGCTGTTC CTGTGCAAGA TGATCATCAT CACTTCTATC AACCCACATC
TAATAATCCT ATTCCCAGTC ATGATCCGAT AGTCAACGAT GGGTTGGCGG GCATGTCTTC AATTGAAAAT GTGCAGCAGA
ACCCTGCAGC AGTGGCAGGT GGGAACAAGA TGGGTCAAAC TTCTTCCCTG CAGCGGGTAG CTAGCTTGGA ACATCTTCAG
AAGCGGATTC GTGGTGGTGT GGATTCCTGT GGACCTCCCT CTAATGGGGA GCAGTAAGTA GCCAAATCTC TTGGATGCTT
CACCAGAAAG TTATTATCAA ACAGTTATTT CTGCTAGTTA TTTATAACTA AAGCCATATT CATCTGGAAT ACACTGTACA
TCAATTTGAT GGATCACATG AGTCTGGATT CAATTAGTGC ACTTCGCCTC TTGTTCTTTT CCAAAAAAA

>Vigan.08G162300.01
ATGGATAGGG TGTTCTCCTC AGTCGACGAA ATCTCCGATC ACTTCTGGCC ATCGCCGCCG ATCCCCGTCT CCGCCGCCGA
TGAGGCCTCT AAGATGAGCC GTAGCGCCTC CGAGTGGGCC TTCCAACGCT TCATCCAGGA AGCTTCCGCA CCCTCTCCCC
CCTCTCCTTC CTCCGCCACC ACGGCTACTT CTGCGGCCGC CACTGACGTT GTCTTTGTCG AGATCGACGA TCATCCCAAA
CCTGCCCCTG CTCCTCCCCA GAACGCCGCC GTTTTGCCCA ATGCCCCTGT TCCCGTACCC CTTGACTCCG ATGAGTACCA
GGCCTTCCTC AAGAGCAAGC TCAACCTTGC ATGCGCTGCT GTTGCCATGA CTAGGGCATC TTTGGCTAAA TCTCAAGAGC
CAGCCCCTTT TTCTGATGGT GGATCACAGC CTATCGATCC TTCTCAAGTT GGATCTCAGA CTACATCTAA AGGATCTATT
CCTTCTGGAA ATGATCCATC TAAGTTACAA GATAAAGATA CGAAAGTACC AGTTGGGATG CCTTCCATAC CTTCCACGCA
AAAGAAACCT GTTGTTGCAG TTAGACCATC AACAAGTGGA TCATCAAGAG AACTGTCAGA TGATGATGAT GCTGAGGGAG
AGACATCTAT GAACGACATG GACCCAGCTG ATGCAAAAAG AGTAAGGAGG ATGCTATCCA ATAGGGAGTC TGCCCGGCGC
TCTAGAAGAA GAAAGCAGGC TCATTTAACT GACCTAGAAA CACAGGTTTC TCAATTAAGA GGTGAAAATT CTACCTTGTT
GAAGCGCCTT ACTGATGTAA GTCAGAAATA CAGTGAATCT GCTGTTGACA ACAGAGTTTT AAAAGCTGAT GTGGAAACAT
TAAGAGCAAA GGTGAAGATG GCTGAAGAGA CCGTCAAAAG AATTACCGGG TTGAATCCAA TGGTTCATGC CATGTCTGAC
ATGTCACCAT TGGGCATGAC GTTATTTGAT GGAAGAAGCC CTTCAGACAC TTCAGCAGAT GCAGCTGTTC CTGTGCAAGA
TGATCATCAT CACTTCTATC AACCCACATC TAATAATCCT ATTCCCAGTC ATGATCCGAT AGTCAACGAT GGGTTGGCGG
GCATGTCTTC AATTGAAAAT GTGCAGCAGA ACCCTGCAGC AGTGGCAGGT GGGAACAAGA TGGGTCAAAC TTCTTCCCTG
CAGCGGGTAG CTAGCTTGGA ACATCTTCAG AAGCGGATTC GTGGTGGTGT GGATTCCTGT GGACCTCCCT CTAATGGGGA
GCAGTAA

>Vigan.08G162300.01
MDRVFSSVDE ISDHFWPSPP IPVSAADEAS KMSRSASEWA FQRFIQEASA PSPPSPSSAT TATSAAATDV VFVEIDDHPK
PAPAPPQNAA VLPNAPVPVP LDSDEYQAFL KSKLNLACAA VAMTRASLAK SQEPAPFSDG GSQPIDPSQV GSQTTSKGSI
PSGNDPSKLQ DKDTKVPVGM PSIPSTQKKP VVAVRPSTSG SSRELSDDDD AEGETSMNDM DPADAKRVRR MLSNRESARR
SRRRKQAHLT DLETQVSQLR GENSTLLKRL TDVSQKYSES AVDNRVLKAD VETLRAKVKM AEETVKRITG LNPMVHAMSD
MSPLGMTLFD GRSPSDTSAD AAVPVQDDHH HFYQPTSNNP IPSHDPIVND GLAGMSSIEN VQQNPAAVAG GNKMGQTSSL
QRVASLEHLQ KRIRGGVDSC GPPSNGEQ*