GBrowse Details

Vigan.08G161300.01

Basic Information:
Name: Vigan.08G161300.01
Multiple alignment
Variant Information
Position: Chr08:14432710..14434044 (+ strand)
Length: 1335
Functional Information:
Description: Similar to uncharacterized LOC101212719. [XP_004170316.1, Cucumis sativus]
InterPro: Protein of unknown function DUF1685 (IPR012881)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,1.04,0.09,0.00,0.00,0.00,0.00
Arabidopsis thaliana homolog: AT1G08790.1
Automatic updates:
Name: NM_001251640 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305652 (LOC100305652), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:14432710..14432862 (+ strand)
Length: 153
Type: five_prime_UTR
Position: Chr08:14432863..14433367 (+ strand)
Length: 505
Type: CDS
Position: Chr08:14433467..14433546 (+ strand)
Length: 80
Type: CDS
Position: Chr08:14433547..14434044 (+ strand)
Length: 498
Type: three_prime_UTR

>Vigan.08G161300.01 class=Sequence position=Chr08:14432710..14434044 (+ strand)
GTCGCACTCC ACCTACAATT CATTCATTTA TCCACCACAA TCCGTTTACC TTTCCCGGCG AGGCCACGCA AGGCGCCTCC
CCCTTGCCGC CTCCGCCGTC ACAGCCACCA CATCAATTTT ATTTCCTCCA CAACCACCCT CTGCGCTGCA AATATGAGGG
AGGAAAGGCA CAAGGAGCAT CATCATCACT ATCATCATCA TCATCATCAT GAGATGCTGT TATCTTCCTC TTCTTCCTCC
TCATCGCCCA GCGAGTCAGA CGAGGAGTTG CAACACATGC TGTTGGCTCC ACCATTGTGG AAGGACAAGA AGAGGTTATC
GAAGCAGCTA TCGATGTGCG AGAAGCCAAG AGACATTGCA TGGGAAAGAA GACGAATGCA GGAGCGGAGG AGAAGTTCCA
CGGTATGTGA TGATTTGACC GACGAGGACC TGAACGAGCT TAAAGGGTGT ATAGAACTTG GATTCGGGTT CAACGAGGAA
GACGGTCAGA GACTGTGTAA CACGTTGCCC GCACTCGATC TTTATTTCGC TGTCAACCGC AGGTTGTCTC CTAGCCCTGT
CTCCACTCCT CAGAGTCGTG CCTCTTCCCT CGGAGGTCGT TCTTCCTCGT TCGGAAGCCC AAGAAGTGAC TCTGACTCTT
GGAAGATTTG TAGCCCAGGT CTCTTTATCT TCTTCATTAT TCAACCCTCT TATCGTAATA ATCATTTGAT TATTAATTTT
AATTTTCATT GCTTAAAAGT TTGAATATTT TTTGCAGGGG ATGACCCTGA ACATGTGAAG ACCAAGTTAA GGCATTGGGC
TCAAGCCGTA GCATGTTCTG TGATGCAATC TTCTTGAGAA AATAATTTGT GGGATGTTCT GTACAGAGAG GGAACGAAAC
AAAAGCAGAA AAACAGAAAA AAAATATGTA GAAATTGGGA GAAAATAAAA AAGAGACTTT GCTTAAACTT GAATACGATT
ATTCCTTGTG AAGGGATTTT TTTGTTGGAG ACTAAGTAAT TCACTTTGGT GGGTGAATTT AGAATTTGGT TAGAGCAGAG
CGATGGAAGC AATTATGACG AACCCTAATT TCTTGAGCGA TTTTAATTAT TCTGTTTTTT GTGTTGTAAT CCGAAAGTGT
CCCTGGCAGA GCGTATTTGA ATTCCTATAG CTATTTTTTG GATGAAATGG TAAAAAGTAC AATAATTAAG AATAGCAAAG
TGGGTTGAGG ATAATAGCTC TCTTGAACAT GCACTTAAGA GATTTCACAC CGATGACATA TATATGTATT ACTAGATTAT
CAGTGTTACG CCCTTTCCTT AGCTTAGGAC ATCCTTTCAC ATGTTGTGAT CACTT

>Vigan.08G161300.01
GTCGCACTCC ACCTACAATT CATTCATTTA TCCACCACAA TCCGTTTACC TTTCCCGGCG AGGCCACGCA AGGCGCCTCC
CCCTTGCCGC CTCCGCCGTC ACAGCCACCA CATCAATTTT ATTTCCTCCA CAACCACCCT CTGCGCTGCA AATATGAGGG
AGGAAAGGCA CAAGGAGCAT CATCATCACT ATCATCATCA TCATCATCAT GAGATGCTGT TATCTTCCTC TTCTTCCTCC
TCATCGCCCA GCGAGTCAGA CGAGGAGTTG CAACACATGC TGTTGGCTCC ACCATTGTGG AAGGACAAGA AGAGGTTATC
GAAGCAGCTA TCGATGTGCG AGAAGCCAAG AGACATTGCA TGGGAAAGAA GACGAATGCA GGAGCGGAGG AGAAGTTCCA
CGGTATGTGA TGATTTGACC GACGAGGACC TGAACGAGCT TAAAGGGTGT ATAGAACTTG GATTCGGGTT CAACGAGGAA
GACGGTCAGA GACTGTGTAA CACGTTGCCC GCACTCGATC TTTATTTCGC TGTCAACCGC AGGTTGTCTC CTAGCCCTGT
CTCCACTCCT CAGAGTCGTG CCTCTTCCCT CGGAGGTCGT TCTTCCTCGT TCGGAAGCCC AAGAAGTGAC TCTGACTCTT
GGAAGATTTG TAGCCCAGGG GATGACCCTG AACATGTGAA GACCAAGTTA AGGCATTGGG CTCAAGCCGT AGCATGTTCT
GTGATGCAAT CTTCTTGAGA AAATAATTTG TGGGATGTTC TGTACAGAGA GGGAACGAAA CAAAAGCAGA AAAACAGAAA
AAAAATATGT AGAAATTGGG AGAAAATAAA AAAGAGACTT TGCTTAAACT TGAATACGAT TATTCCTTGT GAAGGGATTT
TTTTGTTGGA GACTAAGTAA TTCACTTTGG TGGGTGAATT TAGAATTTGG TTAGAGCAGA GCGATGGAAG CAATTATGAC
GAACCCTAAT TTCTTGAGCG ATTTTAATTA TTCTGTTTTT TGTGTTGTAA TCCGAAAGTG TCCCTGGCAG AGCGTATTTG
AATTCCTATA GCTATTTTTT GGATGAAATG GTAAAAAGTA CAATAATTAA GAATAGCAAA GTGGGTTGAG GATAATAGCT
CTCTTGAACA TGCACTTAAG AGATTTCACA CCGATGACAT ATATATGTAT TACTAGATTA TCAGTGTTAC GCCCTTTCCT
TAGCTTAGGA CATCCTTTCA CATGTTGTGA TCACTT

>Vigan.08G161300.01
ATGAGGGAGG AAAGGCACAA GGAGCATCAT CATCACTATC ATCATCATCA TCATCATGAG ATGCTGTTAT CTTCCTCTTC
TTCCTCCTCA TCGCCCAGCG AGTCAGACGA GGAGTTGCAA CACATGCTGT TGGCTCCACC ATTGTGGAAG GACAAGAAGA
GGTTATCGAA GCAGCTATCG ATGTGCGAGA AGCCAAGAGA CATTGCATGG GAAAGAAGAC GAATGCAGGA GCGGAGGAGA
AGTTCCACGG TATGTGATGA TTTGACCGAC GAGGACCTGA ACGAGCTTAA AGGGTGTATA GAACTTGGAT TCGGGTTCAA
CGAGGAAGAC GGTCAGAGAC TGTGTAACAC GTTGCCCGCA CTCGATCTTT ATTTCGCTGT CAACCGCAGG TTGTCTCCTA
GCCCTGTCTC CACTCCTCAG AGTCGTGCCT CTTCCCTCGG AGGTCGTTCT TCCTCGTTCG GAAGCCCAAG AAGTGACTCT
GACTCTTGGA AGATTTGTAG CCCAGGGGAT GACCCTGAAC ATGTGAAGAC CAAGTTAAGG CATTGGGCTC AAGCCGTAGC
ATGTTCTGTG ATGCAATCTT CTTGA

>Vigan.08G161300.01
MREERHKEHH HHYHHHHHHE MLLSSSSSSS SPSESDEELQ HMLLAPPLWK DKKRLSKQLS MCEKPRDIAW ERRRMQERRR
SSTVCDDLTD EDLNELKGCI ELGFGFNEED GQRLCNTLPA LDLYFAVNRR LSPSPVSTPQ SRASSLGGRS SSFGSPRSDS
DSWKICSPGD DPEHVKTKLR HWAQAVACSV MQSS*